RNA–Protein interactions for RNA: ENST00000490127.5

RBM3-209, Transcript of RNA binding motif protein 3, humanhuman

TSL 5

Gene RBM3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-209ENST00000490127 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
RBM3-209ENST00000490127 ABCC9O60706 1549 aa25.4■■□□□ 1.66
RBM3-209ENST00000490127 CCDC180Q9P1Z9 1646 aa25.17■■□□□ 1.62
RBM3-209ENST00000490127 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
RBM3-209ENST00000490127 DNAJC5BQ9UF47 199 aa23.98■■□□□ 1.43
RBM3-209ENST00000490127 NACADO15069 1562 aa23.88■■□□□ 1.41
RBM3-209ENST00000490127 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
RBM3-209ENST00000490127 PABPN1Q86U42 306 aaKnown RBP eCLIP23.67■■□□□ 1.382e-6■□□□□ 8.1
RBM3-209ENST00000490127 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
RBM3-209ENST00000490127 UNC13AQ9UPW8 1703 aa23.47■■□□□ 1.35
RBM3-209ENST00000490127 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
RBM3-209ENST00000490127 ZCCHC6Q5VYS8 1495 aaKnown RBP23.17■■□□□ 1.3
RBM3-209ENST00000490127 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
RBM3-209ENST00000490127 SHROOM4Q9ULL8 1493 aa23.04■■□□□ 1.28
RBM3-209ENST00000490127 SCRIBQ14160 1630 aa22.96■■□□□ 1.27
RBM3-209ENST00000490127 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
RBM3-209ENST00000490127 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
RBM3-209ENST00000490127 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
RBM3-209ENST00000490127 DNAJC5Q9H3Z4 198 aa22.17■■□□□ 1.14
RBM3-209ENST00000490127 NCAPD3P42695 1498 aa22.07■■□□□ 1.12
RBM3-209ENST00000490127 ATAD2BQ9ULI0 1458 aa21.97■■□□□ 1.11
RBM3-209ENST00000490127 ERCC6Q03468 1493 aa21.96■■□□□ 1.11
RBM3-209ENST00000490127 CUX2O14529 1486 aa21.94■■□□□ 1.1
RBM3-209ENST00000490127 SMARCA2P51531 1590 aa21.9■■□□□ 1.1
RBM3-209ENST00000490127 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
RBM3-209ENST00000490127 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
RBM3-209ENST00000490127 BAZ1AQ9NRL2 1556 aaPredicted RBP21.77■■□□□ 1.08
RBM3-209ENST00000490127 BAZ1BQ9UIG0 1483 aaKnown RBP21.76■■□□□ 1.07
RBM3-209ENST00000490127 NESP48681 1621 aa21.75■■□□□ 1.07
RBM3-209ENST00000490127 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
RBM3-209ENST00000490127 MROH2BQ7Z745 1585 aa21.59■■□□□ 1.05
RBM3-209ENST00000490127 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
RBM3-209ENST00000490127 PDS5BQ9NTI5 1447 aa21.51■■□□□ 1.03
RBM3-209ENST00000490127 THOC2Q8NI27 1593 aaKnown RBP21.51■■□□□ 1.03
RBM3-209ENST00000490127 KIF21AQ7Z4S6 1674 aa21.43■■□□□ 1.02
RBM3-209ENST00000490127 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
RBM3-209ENST00000490127 WIZO95785 1651 aa21.31■■□□□ 1
RBM3-209ENST00000490127 MRC2Q9UBG0 1479 aa21.29■■□□□ 1
RBM3-209ENST00000490127 WDR62O43379 1518 aa21.21■□□□□ 0.99
RBM3-209ENST00000490127 CEP164Q9UPV0 1460 aa21.18■□□□□ 0.98
RBM3-209ENST00000490127 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
RBM3-209ENST00000490127 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.98
RBM3-209ENST00000490127 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
RBM3-209ENST00000490127 CFTRP13569 1480 aa21.1■□□□□ 0.97
RBM3-209ENST00000490127 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
RBM3-209ENST00000490127 OSCARQ8IYS5 282 aa21■□□□□ 0.95
RBM3-209ENST00000490127 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
RBM3-209ENST00000490127 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.93
RBM3-209ENST00000490127 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
RBM3-209ENST00000490127 IFT140Q96RY7 1462 aa20.77■□□□□ 0.92
RBM3-209ENST00000490127 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
RBM3-209ENST00000490127 TOPBP1Q92547 1522 aa20.72■□□□□ 0.91
RBM3-209ENST00000490127 ABCC8Q09428 1581 aa20.7■□□□□ 0.9
RBM3-209ENST00000490127 RIMBP3CA6NJZ7 1639 aa20.64■□□□□ 0.89
RBM3-209ENST00000490127 RIMBP3BA6NNM3 1639 aa20.64■□□□□ 0.89
RBM3-209ENST00000490127 RIMBP3Q9UFD9 1639 aa20.64■□□□□ 0.89
RBM3-209ENST00000490127 DNMBPQ6XZF7 1577 aa20.61■□□□□ 0.89
RBM3-209ENST00000490127 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
RBM3-209ENST00000490127 ARHGEF11O15085 1522 aa20.57■□□□□ 0.88
RBM3-209ENST00000490127 AQRO60306 1485 aaKnown RBP eCLIP20.56■□□□□ 0.882e-11■■■■■ 28.6
RBM3-209ENST00000490127 FBLN2P98095 1184 aa20.53■□□□□ 0.88
RBM3-209ENST00000490127 CYB5RLQ6IPT4 315 aa20.52■□□□□ 0.88
RBM3-209ENST00000490127 TARBP1Q13395 1621 aaKnown RBP20.51■□□□□ 0.87
RBM3-209ENST00000490127 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
RBM3-209ENST00000490127 CHD1O14646 1710 aa20.45■□□□□ 0.86
RBM3-209ENST00000490127 SOGA1O94964 1423 aa20.44■□□□□ 0.86
RBM3-209ENST00000490127 RAD54L2Q9Y4B4 1467 aa20.44■□□□□ 0.86
RBM3-209ENST00000490127 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
RBM3-209ENST00000490127 TRHP20396 242 aaPredicted RBP20.36■□□□□ 0.85
RBM3-209ENST00000490127 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
RBM3-209ENST00000490127 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
RBM3-209ENST00000490127 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
RBM3-209ENST00000490127 SNAPC4Q5SXM2 1469 aa20.32■□□□□ 0.84
RBM3-209ENST00000490127 SUPT5HO00267 1087 aaKnown RBP20.32■□□□□ 0.84
RBM3-209ENST00000490127 WDR97A6NE52 1622 aa20.3■□□□□ 0.84
RBM3-209ENST00000490127 CUX1P39880 1505 aa20.29■□□□□ 0.84
RBM3-209ENST00000490127 GRIN2BQ13224 1484 aa20.26■□□□□ 0.83
RBM3-209ENST00000490127 MAGI1Q96QZ7 1491 aaPredicted RBP20.26■□□□□ 0.83
RBM3-209ENST00000490127 SYNJ1O43426 1573 aa20.23■□□□□ 0.83
RBM3-209ENST00000490127 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
RBM3-209ENST00000490127 SYNJ2O15056 1496 aa20.2■□□□□ 0.82
RBM3-209ENST00000490127 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
RBM3-209ENST00000490127 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
RBM3-209ENST00000490127 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
RBM3-209ENST00000490127 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
RBM3-209ENST00000490127 WRNQ14191 1432 aaPredicted RBP eCLIP20.03■□□□□ 0.8
RBM3-209ENST00000490127 GRIN2AQ12879 1464 aa19.98■□□□□ 0.79
RBM3-209ENST00000490127 FHAD1B1AJZ9 1412 aa19.92■□□□□ 0.78
RBM3-209ENST00000490127 NUP160Q12769 1436 aa19.92■□□□□ 0.78
RBM3-209ENST00000490127 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
RBM3-209ENST00000490127 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
RBM3-209ENST00000490127 AEBP2Q6ZN18 517 aaPredicted RBP19.91■□□□□ 0.78
RBM3-209ENST00000490127 ERCC6L2Q5T890 1561 aa19.9■□□□□ 0.78
RBM3-209ENST00000490127 BIVM-ERCC5R4GMW8 1640 aa19.9■□□□□ 0.78
RBM3-209ENST00000490127 CEP170Q5SW79 1584 aa19.89■□□□□ 0.77
RBM3-209ENST00000490127 ERICH3Q5RHP9 1530 aa19.85■□□□□ 0.77
RBM3-209ENST00000490127 SHROOM2Q13796 1616 aa19.81■□□□□ 0.76
RBM3-209ENST00000490127 JPH4Q96JJ6 628 aa19.8■□□□□ 0.76
RBM3-209ENST00000490127 PRG4Q92954 1404 aaPredicted RBP19.78■□□□□ 0.76
RBM3-209ENST00000490127 NPM1P06748 294 aaKnown RBP eCLIP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms