RNA–Protein interactions for RNA: ENST00000490104.5

TSN-208, Transcript of translin, humanhuman

TSL 2

Gene TSN, Length 2,717 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSN-208ENST00000490104 NISCHQ9Y2I1 1504 aa31.77■■■□□ 2.68
TSN-208ENST00000490104 CCDC180Q9P1Z9 1646 aa27.58■■■□□ 2.01
TSN-208ENST00000490104 DCAF8L2P0C7V8 631 aa26.9■■□□□ 1.9
TSN-208ENST00000490104 ABCC9O60706 1549 aa26.79■■□□□ 1.88
TSN-208ENST00000490104 ZCCHC6Q5VYS8 1495 aaKnown RBP26.61■■□□□ 1.85
TSN-208ENST00000490104 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
TSN-208ENST00000490104 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
TSN-208ENST00000490104 NACADO15069 1562 aa25.81■■□□□ 1.72
TSN-208ENST00000490104 SCRIBQ14160 1630 aa25.75■■□□□ 1.71
TSN-208ENST00000490104 RB1CC1Q8TDY2 1594 aa25.71■■□□□ 1.71
TSN-208ENST00000490104 MYO15BQ96JP2 1530 aa25.7■■□□□ 1.71
TSN-208ENST00000490104 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.65
TSN-208ENST00000490104 UNC13AQ9UPW8 1703 aa25.28■■□□□ 1.64
TSN-208ENST00000490104 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
TSN-208ENST00000490104 BICRAQ9NZM4 1560 aa25.03■■□□□ 1.6
TSN-208ENST00000490104 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
TSN-208ENST00000490104 MROH2BQ7Z745 1585 aa24.67■■□□□ 1.54
TSN-208ENST00000490104 RSF1Q96T23 1441 aaPredicted RBP24.66■■□□□ 1.54
TSN-208ENST00000490104 BAZ1AQ9NRL2 1556 aaPredicted RBP24.51■■□□□ 1.51
TSN-208ENST00000490104 WIZO95785 1651 aa24.49■■□□□ 1.51
TSN-208ENST00000490104 SMARCA4P51532 1647 aa24.48■■□□□ 1.51
TSN-208ENST00000490104 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
TSN-208ENST00000490104 ATAD2BQ9ULI0 1458 aa24.16■■□□□ 1.46
TSN-208ENST00000490104 CC2D2AQ9P2K1 1620 aa24.05■■□□□ 1.44
TSN-208ENST00000490104 BAZ1BQ9UIG0 1483 aaKnown RBP24.05■■□□□ 1.44
TSN-208ENST00000490104 TOP2AP11388 1531 aaKnown RBP24.04■■□□□ 1.44
TSN-208ENST00000490104 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
TSN-208ENST00000490104 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
TSN-208ENST00000490104 CCDC88BA6NC98 1476 aa23.93■■□□□ 1.42
TSN-208ENST00000490104 DNAJC5BQ9UF47 199 aa23.92■■□□□ 1.42
TSN-208ENST00000490104 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
TSN-208ENST00000490104 HMGXB3Q12766 1538 aa23.77■■□□□ 1.4
TSN-208ENST00000490104 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
TSN-208ENST00000490104 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
TSN-208ENST00000490104 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
TSN-208ENST00000490104 NESP48681 1621 aa23.45■■□□□ 1.34
TSN-208ENST00000490104 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
TSN-208ENST00000490104 FAM9AQ8IZU1 332 aaPredicted RBP23.36■■□□□ 1.33
TSN-208ENST00000490104 CFTRP13569 1480 aa23.35■■□□□ 1.33
TSN-208ENST00000490104 EHMT2Q96KQ7 1210 aa23.28■■□□□ 1.32
TSN-208ENST00000490104 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
TSN-208ENST00000490104 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
TSN-208ENST00000490104 FANCD2Q9BXW9 1451 aa23.16■■□□□ 1.3
TSN-208ENST00000490104 LAMC3Q9Y6N6 1575 aa23.09■■□□□ 1.29
TSN-208ENST00000490104 LOC105371045A0A1W2PR82 267 aa23.08■■□□□ 1.29
TSN-208ENST00000490104 PRDM2Q13029 1718 aa23.06■■□□□ 1.28
TSN-208ENST00000490104 CUX1P39880 1505 aa23.05■■□□□ 1.28
TSN-208ENST00000490104 SOGA1O94964 1423 aa23.02■■□□□ 1.28
TSN-208ENST00000490104 KIF21AQ7Z4S6 1674 aa23.01■■□□□ 1.27
TSN-208ENST00000490104 PDS5BQ9NTI5 1447 aa23■■□□□ 1.27
TSN-208ENST00000490104 CEP164Q9UPV0 1460 aa23■■□□□ 1.27
TSN-208ENST00000490104 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
TSN-208ENST00000490104 TOP2BQ02880 1626 aa22.94■■□□□ 1.26
TSN-208ENST00000490104 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
TSN-208ENST00000490104 URB2Q14146 1524 aaKnown RBP22.89■■□□□ 1.25
TSN-208ENST00000490104 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
TSN-208ENST00000490104 FGD5Q6ZNL6 1462 aa22.86■■□□□ 1.25
TSN-208ENST00000490104 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
TSN-208ENST00000490104 RAD54L2Q9Y4B4 1467 aa22.82■■□□□ 1.24
TSN-208ENST00000490104 DNMBPQ6XZF7 1577 aa22.79■■□□□ 1.24
TSN-208ENST00000490104 POLA1P09884 1462 aaPredicted RBP22.76■■□□□ 1.23
TSN-208ENST00000490104 CSRNP3Q8WYN3 585 aa22.73■■□□□ 1.23
TSN-208ENST00000490104 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
TSN-208ENST00000490104 CUX2O14529 1486 aa22.71■■□□□ 1.23
TSN-208ENST00000490104 TDRD9Q8NDG6 1382 aaKnown RBP22.66■■□□□ 1.22
TSN-208ENST00000490104 RANGAP1P46060 587 aaPredicted RBP22.63■■□□□ 1.21
TSN-208ENST00000490104 KIF27Q86VH2 1401 aa22.61■■□□□ 1.21
TSN-208ENST00000490104 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
TSN-208ENST00000490104 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.21
TSN-208ENST00000490104 WDR62O43379 1518 aa22.56■■□□□ 1.2
TSN-208ENST00000490104 EEA1Q15075 1411 aa22.55■■□□□ 1.2
TSN-208ENST00000490104 AQRO60306 1485 aaKnown RBP eCLIP22.52■■□□□ 1.22e-8■■■□□ 19
TSN-208ENST00000490104 RAPGEF2Q9Y4G8 1499 aa22.51■■□□□ 1.19
TSN-208ENST00000490104 ABCA10Q8WWZ4 1543 aa22.51■■□□□ 1.19
TSN-208ENST00000490104 ZNF608Q9ULD9 1512 aaPredicted RBP22.51■■□□□ 1.19
TSN-208ENST00000490104 IGF1RP08069 1367 aa22.48■■□□□ 1.19
TSN-208ENST00000490104 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
TSN-208ENST00000490104 GAPVD1Q14C86 1478 aa22.42■■□□□ 1.18
TSN-208ENST00000490104 WDR97A6NE52 1622 aa22.41■■□□□ 1.18
TSN-208ENST00000490104 GOLGA3Q08378 1498 aa22.41■■□□□ 1.18
TSN-208ENST00000490104 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
TSN-208ENST00000490104 IFT140Q96RY7 1462 aa22.37■■□□□ 1.17
TSN-208ENST00000490104 PRXQ9BXM0 1461 aa22.36■■□□□ 1.17
TSN-208ENST00000490104 ABCA5Q8WWZ7 1642 aa22.34■■□□□ 1.17
TSN-208ENST00000490104 KIF21BO75037 1637 aa22.34■■□□□ 1.17
TSN-208ENST00000490104 FBLN2P98095 1184 aa22.31■■□□□ 1.16
TSN-208ENST00000490104 EIF4G3O43432 1585 aaKnown RBP22.29■■□□□ 1.16
TSN-208ENST00000490104 CEP162Q5TB80 1403 aa22.28■■□□□ 1.16
TSN-208ENST00000490104 TNIKQ9UKE5 1360 aa22.27■■□□□ 1.15
TSN-208ENST00000490104 PBRM1Q86U86 1689 aa22.23■■□□□ 1.15
TSN-208ENST00000490104 PPARGC1BQ86YN6 1023 aaKnown RBP22.23■■□□□ 1.15
TSN-208ENST00000490104 GRIN2BQ13224 1484 aa22.21■■□□□ 1.15
TSN-208ENST00000490104 SNAPC4Q5SXM2 1469 aa22.21■■□□□ 1.15
TSN-208ENST00000490104 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
TSN-208ENST00000490104 P3H3Q8IVL6 736 aa22.17■■□□□ 1.14
TSN-208ENST00000490104 TTBK1Q5TCY1 1321 aaPredicted RBP22.17■■□□□ 1.14
TSN-208ENST00000490104 CUL7Q14999 1698 aa22.14■■□□□ 1.14
TSN-208ENST00000490104 CLIP1P30622 1438 aa22.14■■□□□ 1.14
TSN-208ENST00000490104 CHMP7Q8WUX9 453 aaPredicted RBP22.14■■□□□ 1.13
TSN-208ENST00000490104 ADAMTS12P58397 1594 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms