RNA–Protein interactions for RNA: ENST00000490063.5

PCBP4-214, Transcript of poly(rC) binding protein 4, humanhuman

TSL 5

Gene PCBP4, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-214ENST00000490063 NISCHQ9Y2I1 1504 aa43.19■■■■■ 4.5
PCBP4-214ENST00000490063 CCDC180Q9P1Z9 1646 aa38.68■■■■□ 3.78
PCBP4-214ENST00000490063 ABCC9O60706 1549 aa38.55■■■■□ 3.76
PCBP4-214ENST00000490063 RB1CC1Q8TDY2 1594 aa36.78■■■■□ 3.48
PCBP4-214ENST00000490063 DCAF8L2P0C7V8 631 aa36.57■■■■□ 3.44
PCBP4-214ENST00000490063 NACADO15069 1562 aa36.55■■■■□ 3.44
PCBP4-214ENST00000490063 MYO15BQ96JP2 1530 aa36.07■■■■□ 3.36
PCBP4-214ENST00000490063 PABPN1Q86U42 306 aaKnown RBP eCLIP35.94■■■■□ 3.34
PCBP4-214ENST00000490063 DNAJC5BQ9UF47 199 aa35.92■■■■□ 3.34
PCBP4-214ENST00000490063 UNC13AQ9UPW8 1703 aa35.86■■■■□ 3.33
PCBP4-214ENST00000490063 ZCCHC6Q5VYS8 1495 aaKnown RBP35.81■■■■□ 3.32
PCBP4-214ENST00000490063 DCAF1Q9Y4B6 1507 aa35.67■■■■□ 3.3
PCBP4-214ENST00000490063 BICRAQ9NZM4 1560 aa35.59■■■■□ 3.29
PCBP4-214ENST00000490063 SCRIBQ14160 1630 aa35.28■■■■□ 3.24
PCBP4-214ENST00000490063 SHROOM4Q9ULL8 1493 aa35.21■■■■□ 3.23
PCBP4-214ENST00000490063 CC2D2AQ9P2K1 1620 aa34.8■■■■□ 3.16
PCBP4-214ENST00000490063 EIF4G1Q04637 1599 aaKnown RBP34.77■■■■□ 3.16
PCBP4-214ENST00000490063 CECR2Q9BXF3 1484 aa34.71■■■■□ 3.15
PCBP4-214ENST00000490063 NCAPD3P42695 1498 aa33.71■■■□□ 2.99
PCBP4-214ENST00000490063 SMARCA4P51532 1647 aa33.65■■■□□ 2.98
PCBP4-214ENST00000490063 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
PCBP4-214ENST00000490063 SMARCA2P51531 1590 aa33.6■■■□□ 2.97
PCBP4-214ENST00000490063 BAZ1AQ9NRL2 1556 aaPredicted RBP33.55■■■□□ 2.96
PCBP4-214ENST00000490063 HMGXB3Q12766 1538 aa33.48■■■□□ 2.95
PCBP4-214ENST00000490063 BAZ1BQ9UIG0 1483 aaKnown RBP33.38■■■□□ 2.93
PCBP4-214ENST00000490063 ERCC6Q03468 1493 aa33.34■■■□□ 2.93
PCBP4-214ENST00000490063 PEG3Q9GZU2 1588 aa33.29■■■□□ 2.92
PCBP4-214ENST00000490063 MROH2BQ7Z745 1585 aa33.26■■■□□ 2.92
PCBP4-214ENST00000490063 CUX2O14529 1486 aa33.14■■■□□ 2.9
PCBP4-214ENST00000490063 NESP48681 1621 aa33.12■■■□□ 2.89
PCBP4-214ENST00000490063 LAMC3Q9Y6N6 1575 aa32.96■■■□□ 2.87
PCBP4-214ENST00000490063 DNAJC5Q9H3Z4 198 aa32.94■■■□□ 2.86
PCBP4-214ENST00000490063 WIZO95785 1651 aa32.89■■■□□ 2.86
PCBP4-214ENST00000490063 PDS5BQ9NTI5 1447 aa32.82■■■□□ 2.84
PCBP4-214ENST00000490063 CADPSQ9ULU8 1353 aa32.74■■■□□ 2.83
PCBP4-214ENST00000490063 THOC2Q8NI27 1593 aaKnown RBP32.72■■■□□ 2.83
PCBP4-214ENST00000490063 KIF21AQ7Z4S6 1674 aa32.71■■■□□ 2.83
PCBP4-214ENST00000490063 RSF1Q96T23 1441 aaPredicted RBP32.66■■■□□ 2.82
PCBP4-214ENST00000490063 TOP2AP11388 1531 aaKnown RBP32.5■■■□□ 2.79
PCBP4-214ENST00000490063 MRC2Q9UBG0 1479 aa32.48■■■□□ 2.79
PCBP4-214ENST00000490063 CEP164Q9UPV0 1460 aa32.41■■■□□ 2.78
PCBP4-214ENST00000490063 CFTRP13569 1480 aa32.36■■■□□ 2.77
PCBP4-214ENST00000490063 FANCD2Q9BXW9 1451 aa32.36■■■□□ 2.77
PCBP4-214ENST00000490063 WDR62O43379 1518 aa32.35■■■□□ 2.77
PCBP4-214ENST00000490063 CCDC88BA6NC98 1476 aa32.13■■■□□ 2.73
PCBP4-214ENST00000490063 PRDM2Q13029 1718 aa32.07■■■□□ 2.72
PCBP4-214ENST00000490063 URB2Q14146 1524 aaKnown RBP32.04■■■□□ 2.72
PCBP4-214ENST00000490063 ABCC8Q09428 1581 aa31.77■■■□□ 2.68
PCBP4-214ENST00000490063 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
PCBP4-214ENST00000490063 IFT140Q96RY7 1462 aa31.74■■■□□ 2.67
PCBP4-214ENST00000490063 OSCARQ8IYS5 282 aa31.74■■■□□ 2.67
PCBP4-214ENST00000490063 DNMBPQ6XZF7 1577 aa31.66■■■□□ 2.66
PCBP4-214ENST00000490063 TRIM41Q8WV44 630 aa31.66■■■□□ 2.66
PCBP4-214ENST00000490063 ZNF608Q9ULD9 1512 aaPredicted RBP31.62■■■□□ 2.65
PCBP4-214ENST00000490063 SUPT5HO00267 1087 aaKnown RBP31.49■■■□□ 2.63
PCBP4-214ENST00000490063 EIF4G3O43432 1585 aaKnown RBP31.47■■■□□ 2.63
PCBP4-214ENST00000490063 POLA1P09884 1462 aaPredicted RBP31.43■■■□□ 2.62
PCBP4-214ENST00000490063 TARBP1Q13395 1621 aaKnown RBP31.42■■■□□ 2.62
PCBP4-214ENST00000490063 AQRO60306 1485 aaKnown RBP eCLIP31.4■■■□□ 2.62
PCBP4-214ENST00000490063 SOGA1O94964 1423 aa31.35■■■□□ 2.61
PCBP4-214ENST00000490063 RAD54L2Q9Y4B4 1467 aa31.33■■■□□ 2.61
PCBP4-214ENST00000490063 FGD5Q6ZNL6 1462 aa31.28■■■□□ 2.6
PCBP4-214ENST00000490063 FBLN2P98095 1184 aa31.28■■■□□ 2.6
PCBP4-214ENST00000490063 TDRD9Q8NDG6 1382 aaKnown RBP31.25■■■□□ 2.59
PCBP4-214ENST00000490063 CUX1P39880 1505 aa31.24■■■□□ 2.59
PCBP4-214ENST00000490063 CHD1O14646 1710 aa31.21■■■□□ 2.59
PCBP4-214ENST00000490063 RIMBP3CA6NJZ7 1639 aa31.21■■■□□ 2.59
PCBP4-214ENST00000490063 RIMBP3BA6NNM3 1639 aa31.21■■■□□ 2.59
PCBP4-214ENST00000490063 RIMBP3Q9UFD9 1639 aa31.21■■■□□ 2.59
PCBP4-214ENST00000490063 WDR97A6NE52 1622 aa31.16■■■□□ 2.58
PCBP4-214ENST00000490063 ARHGEF11O15085 1522 aa31.14■■■□□ 2.57
PCBP4-214ENST00000490063 SNAPC4Q5SXM2 1469 aa31.08■■■□□ 2.57
PCBP4-214ENST00000490063 CHMP7Q8WUX9 453 aaPredicted RBP31.07■■■□□ 2.56
PCBP4-214ENST00000490063 GRIN2BQ13224 1484 aa31.05■■■□□ 2.56
PCBP4-214ENST00000490063 MAGI1Q96QZ7 1491 aaPredicted RBP31.02■■■□□ 2.56
PCBP4-214ENST00000490063 CYB5RLQ6IPT4 315 aa30.99■■■□□ 2.55
PCBP4-214ENST00000490063 GAPVD1Q14C86 1478 aa30.96■■■□□ 2.55
PCBP4-214ENST00000490063 ABCA10Q8WWZ4 1543 aa30.93■■■□□ 2.54
PCBP4-214ENST00000490063 SYNJ1O43426 1573 aa30.92■■■□□ 2.54
PCBP4-214ENST00000490063 SYNJ2O15056 1496 aa30.91■■■□□ 2.54
PCBP4-214ENST00000490063 PBRM1Q86U86 1689 aa30.9■■■□□ 2.54
PCBP4-214ENST00000490063 WRNQ14191 1432 aaPredicted RBP eCLIP30.9■■■□□ 2.54
PCBP4-214ENST00000490063 ABCA5Q8WWZ7 1642 aa30.83■■■□□ 2.53
PCBP4-214ENST00000490063 ARAP1Q96P48 1450 aa30.82■■■□□ 2.53
PCBP4-214ENST00000490063 TOP2BQ02880 1626 aa30.82■■■□□ 2.52
PCBP4-214ENST00000490063 CLASP1Q7Z460 1538 aa30.82■■■□□ 2.52
PCBP4-214ENST00000490063 BIVM-ERCC5R4GMW8 1640 aa30.8■■■□□ 2.52
PCBP4-214ENST00000490063 TRHP20396 242 aaPredicted RBP30.66■■■□□ 2.5
PCBP4-214ENST00000490063 GRIN2AQ12879 1464 aa30.63■■■□□ 2.49
PCBP4-214ENST00000490063 ADAMTS12P58397 1594 aa30.6■■■□□ 2.49
PCBP4-214ENST00000490063 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
PCBP4-214ENST00000490063 ERICH3Q5RHP9 1530 aa30.56■■■□□ 2.48
PCBP4-214ENST00000490063 NUP160Q12769 1436 aa30.48■■■□□ 2.47
PCBP4-214ENST00000490063 CEP170Q5SW79 1584 aa30.47■■■□□ 2.47
PCBP4-214ENST00000490063 ERCC6L2Q5T890 1561 aa30.34■■■□□ 2.45
PCBP4-214ENST00000490063 SHROOM2Q13796 1616 aa30.31■■■□□ 2.44
PCBP4-214ENST00000490063 KIF27Q86VH2 1401 aa30.3■■■□□ 2.44
PCBP4-214ENST00000490063 JPH4Q96JJ6 628 aa30.26■■■□□ 2.43
PCBP4-214ENST00000490063 PRG4Q92954 1404 aaPredicted RBP30.24■■■□□ 2.43
PCBP4-214ENST00000490063 IGF1RP08069 1367 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms