RNA–Protein interactions for RNA: ENST00000489848.5

NEPRO-218, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 1,576 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-218ENST00000489848 NISCHQ9Y2I1 1504 aa39.46■■■■□ 3.91
NEPRO-218ENST00000489848 CCDC180Q9P1Z9 1646 aa35.25■■■■□ 3.23
NEPRO-218ENST00000489848 ABCC9O60706 1549 aa34.6■■■■□ 3.13
NEPRO-218ENST00000489848 RB1CC1Q8TDY2 1594 aa33.23■■■□□ 2.91
NEPRO-218ENST00000489848 NACADO15069 1562 aa33.14■■■□□ 2.9
NEPRO-218ENST00000489848 MYO15BQ96JP2 1530 aa32.91■■■□□ 2.86
NEPRO-218ENST00000489848 DCAF8L2P0C7V8 631 aa32.86■■■□□ 2.85
NEPRO-218ENST00000489848 ZCCHC6Q5VYS8 1495 aaKnown RBP32.85■■■□□ 2.85
NEPRO-218ENST00000489848 DCAF1Q9Y4B6 1507 aa32.68■■■□□ 2.82
NEPRO-218ENST00000489848 UNC13AQ9UPW8 1703 aa32.56■■■□□ 2.8
NEPRO-218ENST00000489848 BICRAQ9NZM4 1560 aa32.28■■■□□ 2.76
NEPRO-218ENST00000489848 PABPN1Q86U42 306 aaKnown RBP eCLIP32.23■■■□□ 2.75
NEPRO-218ENST00000489848 SCRIBQ14160 1630 aa32.08■■■□□ 2.73
NEPRO-218ENST00000489848 DNAJC5BQ9UF47 199 aa31.96■■■□□ 2.71
NEPRO-218ENST00000489848 SHROOM4Q9ULL8 1493 aa31.92■■■□□ 2.7
NEPRO-218ENST00000489848 EIF4G1Q04637 1599 aaKnown RBP31.42■■■□□ 2.62
NEPRO-218ENST00000489848 CC2D2AQ9P2K1 1620 aa31.35■■■□□ 2.61
NEPRO-218ENST00000489848 CECR2Q9BXF3 1484 aa31.13■■■□□ 2.57
NEPRO-218ENST00000489848 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
NEPRO-218ENST00000489848 BAZ1AQ9NRL2 1556 aaPredicted RBP30.6■■■□□ 2.49
NEPRO-218ENST00000489848 NCAPD3P42695 1498 aa30.57■■■□□ 2.48
NEPRO-218ENST00000489848 ATAD2BQ9ULI0 1458 aa30.55■■■□□ 2.48
NEPRO-218ENST00000489848 SMARCA2P51531 1590 aa30.51■■■□□ 2.47
NEPRO-218ENST00000489848 HMGXB3Q12766 1538 aa30.44■■■□□ 2.46
NEPRO-218ENST00000489848 PEG3Q9GZU2 1588 aa30.43■■■□□ 2.46
NEPRO-218ENST00000489848 MROH2BQ7Z745 1585 aa30.4■■■□□ 2.46
NEPRO-218ENST00000489848 BAZ1BQ9UIG0 1483 aaKnown RBP30.26■■■□□ 2.44
NEPRO-218ENST00000489848 WIZO95785 1651 aa30.07■■■□□ 2.4
NEPRO-218ENST00000489848 RSF1Q96T23 1441 aaPredicted RBP29.95■■■□□ 2.39
NEPRO-218ENST00000489848 NESP48681 1621 aa29.9■■■□□ 2.38
NEPRO-218ENST00000489848 LAMC3Q9Y6N6 1575 aa29.82■■■□□ 2.36
NEPRO-218ENST00000489848 ERCC6Q03468 1493 aa29.82■■■□□ 2.36
NEPRO-218ENST00000489848 TOP2AP11388 1531 aaKnown RBP29.74■■■□□ 2.35
NEPRO-218ENST00000489848 CUX2O14529 1486 aa29.65■■■□□ 2.34
NEPRO-218ENST00000489848 CADPSQ9ULU8 1353 aa29.64■■■□□ 2.33
NEPRO-218ENST00000489848 KIF21AQ7Z4S6 1674 aa29.6■■■□□ 2.33
NEPRO-218ENST00000489848 THOC2Q8NI27 1593 aaKnown RBP29.57■■■□□ 2.32
NEPRO-218ENST00000489848 PDS5BQ9NTI5 1447 aa29.57■■■□□ 2.32
NEPRO-218ENST00000489848 CFTRP13569 1480 aa29.45■■■□□ 2.31
NEPRO-218ENST00000489848 CCDC88BA6NC98 1476 aa29.35■■■□□ 2.29
NEPRO-218ENST00000489848 MRC2Q9UBG0 1479 aa29.31■■■□□ 2.28
NEPRO-218ENST00000489848 FANCD2Q9BXW9 1451 aa29.31■■■□□ 2.28
NEPRO-218ENST00000489848 CEP164Q9UPV0 1460 aa29.3■■■□□ 2.28
NEPRO-218ENST00000489848 PRDM2Q13029 1718 aa29.29■■■□□ 2.28
NEPRO-218ENST00000489848 WDR62O43379 1518 aa29.27■■■□□ 2.28
NEPRO-218ENST00000489848 URB2Q14146 1524 aaKnown RBP29.06■■■□□ 2.24
NEPRO-218ENST00000489848 DNAJC5Q9H3Z4 198 aa28.94■■■□□ 2.22
NEPRO-218ENST00000489848 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
NEPRO-218ENST00000489848 TOPBP1Q92547 1522 aa28.83■■■□□ 2.21
NEPRO-218ENST00000489848 DNMBPQ6XZF7 1577 aa28.8■■■□□ 2.2
NEPRO-218ENST00000489848 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
NEPRO-218ENST00000489848 IFT140Q96RY7 1462 aa28.69■■■□□ 2.18
NEPRO-218ENST00000489848 ZNF608Q9ULD9 1512 aaPredicted RBP28.6■■■□□ 2.17
NEPRO-218ENST00000489848 TARBP1Q13395 1621 aaKnown RBP28.58■■■□□ 2.17
NEPRO-218ENST00000489848 POLA1P09884 1462 aaPredicted RBP28.58■■■□□ 2.17
NEPRO-218ENST00000489848 CUX1P39880 1505 aa28.53■■■□□ 2.16
NEPRO-218ENST00000489848 EIF4G3O43432 1585 aaKnown RBP28.52■■■□□ 2.16
NEPRO-218ENST00000489848 FGD5Q6ZNL6 1462 aa28.47■■■□□ 2.15
NEPRO-218ENST00000489848 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
NEPRO-218ENST00000489848 SOGA1O94964 1423 aa28.39■■■□□ 2.14
NEPRO-218ENST00000489848 AQRO60306 1485 aaKnown RBP eCLIP28.37■■■□□ 2.13
NEPRO-218ENST00000489848 WDR97A6NE52 1622 aa28.35■■■□□ 2.13
NEPRO-218ENST00000489848 OSCARQ8IYS5 282 aa28.28■■■□□ 2.12
NEPRO-218ENST00000489848 BIVM-ERCC5R4GMW8 1640 aa28.26■■■□□ 2.12
NEPRO-218ENST00000489848 TDRD9Q8NDG6 1382 aaKnown RBP28.26■■■□□ 2.11
NEPRO-218ENST00000489848 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
NEPRO-218ENST00000489848 WRNQ14191 1432 aaPredicted RBP eCLIP28.23■■■□□ 2.11
NEPRO-218ENST00000489848 SYNJ1O43426 1573 aa28.23■■■□□ 2.11
NEPRO-218ENST00000489848 CHD1O14646 1710 aa28.2■■■□□ 2.1
NEPRO-218ENST00000489848 ABCA10Q8WWZ4 1543 aa28.2■■■□□ 2.1
NEPRO-218ENST00000489848 ABCA5Q8WWZ7 1642 aa28.14■■■□□ 2.1
NEPRO-218ENST00000489848 GRIN2BQ13224 1484 aa28.12■■■□□ 2.09
NEPRO-218ENST00000489848 SNAPC4Q5SXM2 1469 aa28.12■■■□□ 2.09
NEPRO-218ENST00000489848 PBRM1Q86U86 1689 aa28.12■■■□□ 2.09
NEPRO-218ENST00000489848 MAGI1Q96QZ7 1491 aaPredicted RBP28.1■■■□□ 2.09
NEPRO-218ENST00000489848 GAPVD1Q14C86 1478 aa28.09■■■□□ 2.09
NEPRO-218ENST00000489848 SYNJ2O15056 1496 aa27.98■■■□□ 2.07
NEPRO-218ENST00000489848 FBLN2P98095 1184 aa27.98■■■□□ 2.07
NEPRO-218ENST00000489848 RIMBP3CA6NJZ7 1639 aa27.97■■■□□ 2.07
NEPRO-218ENST00000489848 RIMBP3BA6NNM3 1639 aa27.97■■■□□ 2.07
NEPRO-218ENST00000489848 RIMBP3Q9UFD9 1639 aa27.97■■■□□ 2.07
NEPRO-218ENST00000489848 ARHGEF11O15085 1522 aa27.93■■■□□ 2.06
NEPRO-218ENST00000489848 CLASP1Q7Z460 1538 aa27.9■■■□□ 2.06
NEPRO-218ENST00000489848 CHMP7Q8WUX9 453 aaPredicted RBP27.89■■■□□ 2.05
NEPRO-218ENST00000489848 ADAMTS12P58397 1594 aa27.88■■■□□ 2.05
NEPRO-218ENST00000489848 ERICH3Q5RHP9 1530 aa27.85■■■□□ 2.05
NEPRO-218ENST00000489848 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
NEPRO-218ENST00000489848 GRIN2AQ12879 1464 aa27.79■■■□□ 2.04
NEPRO-218ENST00000489848 FHAD1B1AJZ9 1412 aa27.76■■■□□ 2.03
NEPRO-218ENST00000489848 ARAP1Q96P48 1450 aa27.69■■■□□ 2.02
NEPRO-218ENST00000489848 NUP160Q12769 1436 aa27.68■■■□□ 2.02
NEPRO-218ENST00000489848 CEP170Q5SW79 1584 aa27.68■■■□□ 2.02
NEPRO-218ENST00000489848 KIF27Q86VH2 1401 aa27.64■■■□□ 2.02
NEPRO-218ENST00000489848 CUL7Q14999 1698 aa27.57■■■□□ 2
NEPRO-218ENST00000489848 CYB5RLQ6IPT4 315 aa27.56■■■□□ 2
NEPRO-218ENST00000489848 IGF1RP08069 1367 aa27.56■■■□□ 2
NEPRO-218ENST00000489848 SHROOM2Q13796 1616 aa27.55■■■□□ 2
NEPRO-218ENST00000489848 RUSC2Q8N2Y8 1516 aa27.49■■□□□ 1.99
NEPRO-218ENST00000489848 ERCC6L2Q5T890 1561 aa27.47■■□□□ 1.99
NEPRO-218ENST00000489848 CARMIL1Q5VZK9 1371 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms