RNA–Protein interactions for RNA: ENST00000489344.5

RBM3-208, Transcript of RNA binding motif protein 3, humanhuman

TSL 2

Gene RBM3, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-208ENST00000489344 NISCHQ9Y2I1 1504 aa35.31■■■■□ 3.24
RBM3-208ENST00000489344 ABCC9O60706 1549 aa32.52■■■□□ 2.8
RBM3-208ENST00000489344 CCDC180Q9P1Z9 1646 aa31.93■■■□□ 2.7
RBM3-208ENST00000489344 DNAJC5BQ9UF47 199 aa30.99■■■□□ 2.55
RBM3-208ENST00000489344 RB1CC1Q8TDY2 1594 aa30.67■■■□□ 2.5
RBM3-208ENST00000489344 NACADO15069 1562 aa30.31■■■□□ 2.44
RBM3-208ENST00000489344 PABPN1Q86U42 306 aaKnown RBP eCLIP30.19■■■□□ 2.422e-6■□□□□ 8.1
RBM3-208ENST00000489344 DCAF8L2P0C7V8 631 aa30.11■■■□□ 2.41
RBM3-208ENST00000489344 UNC13AQ9UPW8 1703 aa30.03■■■□□ 2.4
RBM3-208ENST00000489344 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
RBM3-208ENST00000489344 MYO15BQ96JP2 1530 aa29.66■■■□□ 2.34
RBM3-208ENST00000489344 CECR2Q9BXF3 1484 aa29.34■■■□□ 2.29
RBM3-208ENST00000489344 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
RBM3-208ENST00000489344 SHROOM4Q9ULL8 1493 aa29.29■■■□□ 2.28
RBM3-208ENST00000489344 ZCCHC6Q5VYS8 1495 aaKnown RBP29.13■■■□□ 2.25
RBM3-208ENST00000489344 EIF4G1Q04637 1599 aaKnown RBP29.13■■■□□ 2.25
RBM3-208ENST00000489344 SCRIBQ14160 1630 aa29.12■■■□□ 2.25
RBM3-208ENST00000489344 DCAF1Q9Y4B6 1507 aa29.09■■■□□ 2.25
RBM3-208ENST00000489344 DNAJC5Q9H3Z4 198 aa28.85■■■□□ 2.21
RBM3-208ENST00000489344 CUX2O14529 1486 aa28.22■■■□□ 2.11
RBM3-208ENST00000489344 ERCC6Q03468 1493 aa28.12■■■□□ 2.09
RBM3-208ENST00000489344 NCAPD3P42695 1498 aa27.97■■■□□ 2.07
RBM3-208ENST00000489344 ATAD2BQ9ULI0 1458 aa27.83■■■□□ 2.05
RBM3-208ENST00000489344 NESP48681 1621 aa27.78■■■□□ 2.04
RBM3-208ENST00000489344 HMGXB3Q12766 1538 aa27.73■■■□□ 2.03
RBM3-208ENST00000489344 SMARCA2P51531 1590 aa27.73■■■□□ 2.03
RBM3-208ENST00000489344 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
RBM3-208ENST00000489344 THOC2Q8NI27 1593 aaKnown RBP27.6■■■□□ 2.01
RBM3-208ENST00000489344 BAZ1BQ9UIG0 1483 aaKnown RBP27.55■■■□□ 2
RBM3-208ENST00000489344 LAMC3Q9Y6N6 1575 aa27.45■■□□□ 1.99
RBM3-208ENST00000489344 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
RBM3-208ENST00000489344 TRIM41Q8WV44 630 aa27.42■■□□□ 1.98
RBM3-208ENST00000489344 KIF21AQ7Z4S6 1674 aa27.42■■□□□ 1.98
RBM3-208ENST00000489344 PEG3Q9GZU2 1588 aa27.37■■□□□ 1.97
RBM3-208ENST00000489344 PDS5BQ9NTI5 1447 aa27.32■■□□□ 1.96
RBM3-208ENST00000489344 MROH2BQ7Z745 1585 aa27.22■■□□□ 1.95
RBM3-208ENST00000489344 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
RBM3-208ENST00000489344 CADPSQ9ULU8 1353 aa27.11■■□□□ 1.93
RBM3-208ENST00000489344 WDR62O43379 1518 aa27.07■■□□□ 1.92
RBM3-208ENST00000489344 CEP164Q9UPV0 1460 aa26.91■■□□□ 1.9
RBM3-208ENST00000489344 WIZO95785 1651 aa26.89■■□□□ 1.89
RBM3-208ENST00000489344 OSCARQ8IYS5 282 aa26.84■■□□□ 1.89
RBM3-208ENST00000489344 FANCD2Q9BXW9 1451 aa26.83■■□□□ 1.89
RBM3-208ENST00000489344 CFTRP13569 1480 aa26.68■■□□□ 1.86
RBM3-208ENST00000489344 URB2Q14146 1524 aaKnown RBP26.65■■□□□ 1.86
RBM3-208ENST00000489344 RIMBP3CA6NJZ7 1639 aa26.6■■□□□ 1.85
RBM3-208ENST00000489344 RIMBP3BA6NNM3 1639 aa26.6■■□□□ 1.85
RBM3-208ENST00000489344 RIMBP3Q9UFD9 1639 aa26.6■■□□□ 1.85
RBM3-208ENST00000489344 TOP2AP11388 1531 aaKnown RBP26.48■■□□□ 1.83
RBM3-208ENST00000489344 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
RBM3-208ENST00000489344 RSF1Q96T23 1441 aaPredicted RBP26.43■■□□□ 1.82
RBM3-208ENST00000489344 PRDM2Q13029 1718 aa26.42■■□□□ 1.82
RBM3-208ENST00000489344 ZNF608Q9ULD9 1512 aaPredicted RBP26.42■■□□□ 1.82
RBM3-208ENST00000489344 IFT140Q96RY7 1462 aa26.38■■□□□ 1.81
RBM3-208ENST00000489344 CYB5RLQ6IPT4 315 aa26.29■■□□□ 1.8
RBM3-208ENST00000489344 TOPBP1Q92547 1522 aa26.26■■□□□ 1.79
RBM3-208ENST00000489344 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
RBM3-208ENST00000489344 TRHP20396 242 aaPredicted RBP26.2■■□□□ 1.78
RBM3-208ENST00000489344 CHD1O14646 1710 aa26.19■■□□□ 1.78
RBM3-208ENST00000489344 CCDC88BA6NC98 1476 aa26.18■■□□□ 1.78
RBM3-208ENST00000489344 ARAP1Q96P48 1450 aa26.14■■□□□ 1.78
RBM3-208ENST00000489344 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
RBM3-208ENST00000489344 DNMBPQ6XZF7 1577 aa26.12■■□□□ 1.77
RBM3-208ENST00000489344 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.771e-8■■■■■ 40.1
RBM3-208ENST00000489344 FBLN2P98095 1184 aa26.08■■□□□ 1.77
RBM3-208ENST00000489344 TARBP1Q13395 1621 aaKnown RBP26.06■■□□□ 1.76
RBM3-208ENST00000489344 POLA1P09884 1462 aaPredicted RBP25.95■■□□□ 1.74
RBM3-208ENST00000489344 RAD54L2Q9Y4B4 1467 aa25.89■■□□□ 1.73
RBM3-208ENST00000489344 TDRD9Q8NDG6 1382 aaKnown RBP25.86■■□□□ 1.73
RBM3-208ENST00000489344 AEBP2Q6ZN18 517 aaPredicted RBP25.85■■□□□ 1.73
RBM3-208ENST00000489344 SNAPC4Q5SXM2 1469 aa25.83■■□□□ 1.73
RBM3-208ENST00000489344 CLASP1Q7Z460 1538 aa25.83■■□□□ 1.72
RBM3-208ENST00000489344 SOGA1O94964 1423 aa25.82■■□□□ 1.72
RBM3-208ENST00000489344 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
RBM3-208ENST00000489344 CHMP7Q8WUX9 453 aaPredicted RBP25.76■■□□□ 1.71
RBM3-208ENST00000489344 WDR97A6NE52 1622 aa25.73■■□□□ 1.71
RBM3-208ENST00000489344 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
RBM3-208ENST00000489344 MAGI1Q96QZ7 1491 aaPredicted RBP25.71■■□□□ 1.71
RBM3-208ENST00000489344 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
RBM3-208ENST00000489344 SYNJ2O15056 1496 aa25.64■■□□□ 1.69
RBM3-208ENST00000489344 CUX1P39880 1505 aa25.61■■□□□ 1.69
RBM3-208ENST00000489344 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
RBM3-208ENST00000489344 PBRM1Q86U86 1689 aa25.56■■□□□ 1.68
RBM3-208ENST00000489344 ERCC6L2Q5T890 1561 aa25.42■■□□□ 1.66
RBM3-208ENST00000489344 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
RBM3-208ENST00000489344 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
RBM3-208ENST00000489344 GRIN2AQ12879 1464 aa25.34■■□□□ 1.65
RBM3-208ENST00000489344 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
RBM3-208ENST00000489344 ADAMTS12P58397 1594 aa25.27■■□□□ 1.64
RBM3-208ENST00000489344 NUP160Q12769 1436 aa25.25■■□□□ 1.63
RBM3-208ENST00000489344 KIF13AQ9H1H9 1805 aa25.24■■□□□ 1.63
RBM3-208ENST00000489344 SHROOM2Q13796 1616 aa25.22■■□□□ 1.63
RBM3-208ENST00000489344 WRNQ14191 1432 aaPredicted RBP eCLIP25.16■■□□□ 1.62
RBM3-208ENST00000489344 FHAD1B1AJZ9 1412 aa25.14■■□□□ 1.62
RBM3-208ENST00000489344 PRG4Q92954 1404 aaPredicted RBP25.09■■□□□ 1.61
RBM3-208ENST00000489344 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
RBM3-208ENST00000489344 ERICH3Q5RHP9 1530 aa25.04■■□□□ 1.6
RBM3-208ENST00000489344 FAM69CQ0P6D2 419 aa25.03■■□□□ 1.6
RBM3-208ENST00000489344 TOP2BQ02880 1626 aa25.03■■□□□ 1.6
RBM3-208ENST00000489344 JPH4Q96JJ6 628 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms