RNA–Protein interactions for RNA: ENST00000488925.1

CCDC136-213, Transcript of coiled-coil domain containing 136, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC136, Length 552 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136-213ENST00000488925 NISCHQ9Y2I1 1504 aa49.37■■■■■ 5.49
CCDC136-213ENST00000488925 ABCC9O60706 1549 aa44.79■■■■■ 4.76
CCDC136-213ENST00000488925 CCDC180Q9P1Z9 1646 aa44.46■■■■■ 4.71
CCDC136-213ENST00000488925 RB1CC1Q8TDY2 1594 aa42.47■■■■■ 4.39
CCDC136-213ENST00000488925 DNAJC5BQ9UF47 199 aa42.44■■■■■ 4.38
CCDC136-213ENST00000488925 NACADO15069 1562 aa42.12■■■■■ 4.33
CCDC136-213ENST00000488925 DCAF8L2P0C7V8 631 aa41.66■■■■■ 4.26
CCDC136-213ENST00000488925 PABPN1Q86U42 306 aaKnown RBP eCLIP41.62■■■■■ 4.25
CCDC136-213ENST00000488925 UNC13AQ9UPW8 1703 aa41.56■■■■■ 4.24
CCDC136-213ENST00000488925 MYO15BQ96JP2 1530 aa41.48■■■■■ 4.23
CCDC136-213ENST00000488925 BICRAQ9NZM4 1560 aa41.33■■■■■ 4.21
CCDC136-213ENST00000488925 ZCCHC6Q5VYS8 1495 aaKnown RBP40.84■■■■■ 4.13
CCDC136-213ENST00000488925 DCAF1Q9Y4B6 1507 aa40.79■■■■■ 4.12
CCDC136-213ENST00000488925 SHROOM4Q9ULL8 1493 aa40.7■■■■■ 4.11
CCDC136-213ENST00000488925 CC2D2AQ9P2K1 1620 aa40.47■■■■■ 4.07
CCDC136-213ENST00000488925 SCRIBQ14160 1630 aa40.43■■■■■ 4.06
CCDC136-213ENST00000488925 CECR2Q9BXF3 1484 aa40.39■■■■■ 4.06
CCDC136-213ENST00000488925 EIF4G1Q04637 1599 aaKnown RBP40.3■■■■■ 4.04
CCDC136-213ENST00000488925 DNAJC5Q9H3Z4 198 aa39.23■■■■□ 3.87
CCDC136-213ENST00000488925 NCAPD3P42695 1498 aa38.92■■■■□ 3.82
CCDC136-213ENST00000488925 CUX2O14529 1486 aa38.79■■■■□ 3.8
CCDC136-213ENST00000488925 ATAD2BQ9ULI0 1458 aa38.73■■■■□ 3.79
CCDC136-213ENST00000488925 ERCC6Q03468 1493 aa38.64■■■■□ 3.78
CCDC136-213ENST00000488925 SMARCA4P51532 1647 aa38.58■■■■□ 3.77
CCDC136-213ENST00000488925 HMGXB3Q12766 1538 aa38.58■■■■□ 3.77
CCDC136-213ENST00000488925 SMARCA2P51531 1590 aa38.57■■■■□ 3.76
CCDC136-213ENST00000488925 NESP48681 1621 aa38.4■■■■□ 3.74
CCDC136-213ENST00000488925 BAZ1AQ9NRL2 1556 aaPredicted RBP38.31■■■■□ 3.72
CCDC136-213ENST00000488925 BAZ1BQ9UIG0 1483 aaKnown RBP38.28■■■■□ 3.72
CCDC136-213ENST00000488925 PEG3Q9GZU2 1588 aa38.27■■■■□ 3.72
CCDC136-213ENST00000488925 THOC2Q8NI27 1593 aaKnown RBP38.11■■■■□ 3.69
CCDC136-213ENST00000488925 LAMC3Q9Y6N6 1575 aa38.06■■■■□ 3.68
CCDC136-213ENST00000488925 MROH2BQ7Z745 1585 aa38.03■■■■□ 3.68
CCDC136-213ENST00000488925 KIF21AQ7Z4S6 1674 aa37.88■■■■□ 3.65
CCDC136-213ENST00000488925 PDS5BQ9NTI5 1447 aa37.82■■■■□ 3.64
CCDC136-213ENST00000488925 CADPSQ9ULU8 1353 aa37.68■■■■□ 3.62
CCDC136-213ENST00000488925 MRC2Q9UBG0 1479 aa37.55■■■■□ 3.6
CCDC136-213ENST00000488925 WIZO95785 1651 aa37.53■■■■□ 3.6
CCDC136-213ENST00000488925 WDR62O43379 1518 aa37.51■■■■□ 3.59
CCDC136-213ENST00000488925 CEP164Q9UPV0 1460 aa37.29■■■■□ 3.56
CCDC136-213ENST00000488925 FANCD2Q9BXW9 1451 aa37.24■■■■□ 3.55
CCDC136-213ENST00000488925 TRIM41Q8WV44 630 aa37.22■■■■□ 3.55
CCDC136-213ENST00000488925 CFTRP13569 1480 aa37.2■■■■□ 3.55
CCDC136-213ENST00000488925 RSF1Q96T23 1441 aaPredicted RBP37.1■■■■□ 3.53
CCDC136-213ENST00000488925 TOP2AP11388 1531 aaKnown RBP37.04■■■■□ 3.52
CCDC136-213ENST00000488925 URB2Q14146 1524 aaKnown RBP37■■■■□ 3.51
CCDC136-213ENST00000488925 OSCARQ8IYS5 282 aa36.91■■■■□ 3.5
CCDC136-213ENST00000488925 PRDM2Q13029 1718 aa36.76■■■■□ 3.48
CCDC136-213ENST00000488925 CCDC88BA6NC98 1476 aa36.63■■■■□ 3.45
CCDC136-213ENST00000488925 ZNF608Q9ULD9 1512 aaPredicted RBP36.59■■■■□ 3.45
CCDC136-213ENST00000488925 IFT140Q96RY7 1462 aa36.59■■■■□ 3.45
CCDC136-213ENST00000488925 TOPBP1Q92547 1522 aa36.52■■■■□ 3.44
CCDC136-213ENST00000488925 RIMBP3CA6NJZ7 1639 aa36.51■■■■□ 3.43
CCDC136-213ENST00000488925 RIMBP3BA6NNM3 1639 aa36.51■■■■□ 3.43
CCDC136-213ENST00000488925 RIMBP3Q9UFD9 1639 aa36.51■■■■□ 3.43
CCDC136-213ENST00000488925 ABCC8Q09428 1581 aa36.38■■■■□ 3.41
CCDC136-213ENST00000488925 ARHGEF11O15085 1522 aa36.36■■■■□ 3.41
CCDC136-213ENST00000488925 EIF4G3O43432 1585 aaKnown RBP36.35■■■■□ 3.41
CCDC136-213ENST00000488925 DNMBPQ6XZF7 1577 aa36.33■■■■□ 3.41
CCDC136-213ENST00000488925 TARBP1Q13395 1621 aaKnown RBP36.25■■■■□ 3.39
CCDC136-213ENST00000488925 AQRO60306 1485 aaKnown RBP eCLIP36.18■■■■□ 3.38
CCDC136-213ENST00000488925 CHD1O14646 1710 aa36.14■■■■□ 3.38
CCDC136-213ENST00000488925 POLA1P09884 1462 aaPredicted RBP36.11■■■■□ 3.37
CCDC136-213ENST00000488925 CYB5RLQ6IPT4 315 aa36.06■■■■□ 3.36
CCDC136-213ENST00000488925 ARAP1Q96P48 1450 aa35.99■■■■□ 3.35
CCDC136-213ENST00000488925 RAD54L2Q9Y4B4 1467 aa35.98■■■■□ 3.35
CCDC136-213ENST00000488925 SOGA1O94964 1423 aa35.91■■■■□ 3.34
CCDC136-213ENST00000488925 FBLN2P98095 1184 aa35.91■■■■□ 3.34
CCDC136-213ENST00000488925 TDRD9Q8NDG6 1382 aaKnown RBP35.89■■■■□ 3.34
CCDC136-213ENST00000488925 WDR97A6NE52 1622 aa35.83■■■■□ 3.33
CCDC136-213ENST00000488925 FGD5Q6ZNL6 1462 aa35.81■■■■□ 3.32
CCDC136-213ENST00000488925 SNAPC4Q5SXM2 1469 aa35.8■■■■□ 3.32
CCDC136-213ENST00000488925 CLASP1Q7Z460 1538 aa35.78■■■■□ 3.32
CCDC136-213ENST00000488925 CUX1P39880 1505 aa35.75■■■■□ 3.31
CCDC136-213ENST00000488925 TRHP20396 242 aaPredicted RBP35.71■■■■□ 3.31
CCDC136-213ENST00000488925 MAGI1Q96QZ7 1491 aaPredicted RBP35.7■■■■□ 3.31
CCDC136-213ENST00000488925 GRIN2BQ13224 1484 aa35.65■■■■□ 3.3
CCDC136-213ENST00000488925 SYNJ1O43426 1573 aa35.64■■■■□ 3.3
CCDC136-213ENST00000488925 CHMP7Q8WUX9 453 aaPredicted RBP35.63■■■■□ 3.29
CCDC136-213ENST00000488925 SYNJ2O15056 1496 aa35.59■■■■□ 3.29
CCDC136-213ENST00000488925 PBRM1Q86U86 1689 aa35.48■■■■□ 3.27
CCDC136-213ENST00000488925 GAPVD1Q14C86 1478 aa35.48■■■■□ 3.27
CCDC136-213ENST00000488925 ABCA10Q8WWZ4 1543 aa35.42■■■■□ 3.26
CCDC136-213ENST00000488925 ABCA5Q8WWZ7 1642 aa35.4■■■■□ 3.26
CCDC136-213ENST00000488925 GRIN2AQ12879 1464 aa35.21■■■■□ 3.23
CCDC136-213ENST00000488925 ERCC6L2Q5T890 1561 aa35.18■■■■□ 3.22
CCDC136-213ENST00000488925 ADAMTS12P58397 1594 aa35.15■■■■□ 3.22
CCDC136-213ENST00000488925 NUP160Q12769 1436 aa35.15■■■■□ 3.22
CCDC136-213ENST00000488925 WRNQ14191 1432 aaPredicted RBP eCLIP35.15■■■■□ 3.22
CCDC136-213ENST00000488925 CEP170Q5SW79 1584 aa35.11■■■■□ 3.21
CCDC136-213ENST00000488925 BIVM-ERCC5R4GMW8 1640 aa35.08■■■■□ 3.21
CCDC136-213ENST00000488925 TOP2BQ02880 1626 aa35.06■■■■□ 3.2
CCDC136-213ENST00000488925 SHROOM2Q13796 1616 aa35.03■■■■□ 3.2
CCDC136-213ENST00000488925 SUPT5HO00267 1087 aaKnown RBP35.03■■■■□ 3.2
CCDC136-213ENST00000488925 FHAD1B1AJZ9 1412 aa35.02■■■■□ 3.2
CCDC136-213ENST00000488925 ERICH3Q5RHP9 1530 aa34.95■■■■□ 3.19
CCDC136-213ENST00000488925 AEBP2Q6ZN18 517 aaPredicted RBP34.92■■■■□ 3.18
CCDC136-213ENST00000488925 PRG4Q92954 1404 aaPredicted RBP34.77■■■■□ 3.16
CCDC136-213ENST00000488925 KIF13AQ9H1H9 1805 aa34.75■■■■□ 3.15
CCDC136-213ENST00000488925 JPH4Q96JJ6 628 aa34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms