RNA–Protein interactions for RNA: ENST00000488779.5

EXOSC8-208, Transcript of exosome component 8, humanhuman

TSL 5

Gene EXOSC8, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-208ENST00000488779 AEBP2Q6ZN18 517 aaPredicted RBP26.46■■□□□ 1.83
EXOSC8-208ENST00000488779 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
EXOSC8-208ENST00000488779 NISCHQ9Y2I1 1504 aa22.49■■□□□ 1.19
EXOSC8-208ENST00000488779 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
EXOSC8-208ENST00000488779 PHF23Q9BUL5 403 aaPredicted RBP22.2■■□□□ 1.14
EXOSC8-208ENST00000488779 FOXD1Q16676 465 aa21.03■□□□□ 0.96
EXOSC8-208ENST00000488779 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.8
EXOSC8-208ENST00000488779 PLPPR3Q6T4P5 718 aa19.81■□□□□ 0.76
EXOSC8-208ENST00000488779 PPP6R1Q9UPN7 881 aa19.65■□□□□ 0.74
EXOSC8-208ENST00000488779 PIAS4Q8N2W9 510 aaPredicted RBP19.58■□□□□ 0.72
EXOSC8-208ENST00000488779 ADRA2BP18089 450 aa19.57■□□□□ 0.72
EXOSC8-208ENST00000488779 MSH5O43196 834 aa19.56■□□□□ 0.72
EXOSC8-208ENST00000488779 ABCC9O60706 1549 aa19.41■□□□□ 0.7
EXOSC8-208ENST00000488779 POTEDQ86YR6 584 aa19.4■□□□□ 0.7
EXOSC8-208ENST00000488779 NACADO15069 1562 aa18.84■□□□□ 0.61
EXOSC8-208ENST00000488779 MYO15BQ96JP2 1530 aa18.83■□□□□ 0.6
EXOSC8-208ENST00000488779 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
EXOSC8-208ENST00000488779 ZCCHC6Q5VYS8 1495 aaKnown RBP18.75■□□□□ 0.59
EXOSC8-208ENST00000488779 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
EXOSC8-208ENST00000488779 DCAF8L2P0C7V8 631 aa18.61■□□□□ 0.57
EXOSC8-208ENST00000488779 UNC13AQ9UPW8 1703 aa18.26■□□□□ 0.51
EXOSC8-208ENST00000488779 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
EXOSC8-208ENST00000488779 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
EXOSC8-208ENST00000488779 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
EXOSC8-208ENST00000488779 PABPN1Q86U42 306 aaKnown RBP eCLIP18.11■□□□□ 0.49
EXOSC8-208ENST00000488779 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
EXOSC8-208ENST00000488779 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
EXOSC8-208ENST00000488779 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
EXOSC8-208ENST00000488779 EIF4G1Q04637 1599 aaKnown RBP17.72■□□□□ 0.43
EXOSC8-208ENST00000488779 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
EXOSC8-208ENST00000488779 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
EXOSC8-208ENST00000488779 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
EXOSC8-208ENST00000488779 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
EXOSC8-208ENST00000488779 PPP4R3CPQ6ZMV5 832 aa17.42■□□□□ 0.38
EXOSC8-208ENST00000488779 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
EXOSC8-208ENST00000488779 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
EXOSC8-208ENST00000488779 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
EXOSC8-208ENST00000488779 PEG3Q9GZU2 1588 aa17.33■□□□□ 0.37
EXOSC8-208ENST00000488779 ATAD2BQ9ULI0 1458 aa17.33■□□□□ 0.37
EXOSC8-208ENST00000488779 HMGXB3Q12766 1538 aa17.3■□□□□ 0.36
EXOSC8-208ENST00000488779 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.35
EXOSC8-208ENST00000488779 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
EXOSC8-208ENST00000488779 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
EXOSC8-208ENST00000488779 RSF1Q96T23 1441 aaPredicted RBP17.12■□□□□ 0.33
EXOSC8-208ENST00000488779 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
EXOSC8-208ENST00000488779 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
EXOSC8-208ENST00000488779 WIZO95785 1651 aa17.04■□□□□ 0.32
EXOSC8-208ENST00000488779 TOP2AP11388 1531 aaKnown RBP16.96■□□□□ 0.31
EXOSC8-208ENST00000488779 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
EXOSC8-208ENST00000488779 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
EXOSC8-208ENST00000488779 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.3
EXOSC8-208ENST00000488779 CADPSQ9ULU8 1353 aa16.84■□□□□ 0.29
EXOSC8-208ENST00000488779 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
EXOSC8-208ENST00000488779 NESP48681 1621 aa16.79■□□□□ 0.28
EXOSC8-208ENST00000488779 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
EXOSC8-208ENST00000488779 CFTRP13569 1480 aa16.76■□□□□ 0.27
EXOSC8-208ENST00000488779 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
EXOSC8-208ENST00000488779 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
EXOSC8-208ENST00000488779 CUX2O14529 1486 aa16.69■□□□□ 0.26
EXOSC8-208ENST00000488779 KIF21AQ7Z4S6 1674 aa16.61■□□□□ 0.25
EXOSC8-208ENST00000488779 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
EXOSC8-208ENST00000488779 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
EXOSC8-208ENST00000488779 THOC2Q8NI27 1593 aaKnown RBP16.6■□□□□ 0.25
EXOSC8-208ENST00000488779 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
EXOSC8-208ENST00000488779 PRDM2Q13029 1718 aa16.59■□□□□ 0.25
EXOSC8-208ENST00000488779 SUPT5HO00267 1087 aaKnown RBP16.58■□□□□ 0.24
EXOSC8-208ENST00000488779 MRC2Q9UBG0 1479 aa16.58■□□□□ 0.24
EXOSC8-208ENST00000488779 WDR62O43379 1518 aa16.53■□□□□ 0.24
EXOSC8-208ENST00000488779 NPM3O75607 178 aaKnown RBP16.51■□□□□ 0.23
EXOSC8-208ENST00000488779 ABCC8Q09428 1581 aa16.46■□□□□ 0.23
EXOSC8-208ENST00000488779 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
EXOSC8-208ENST00000488779 URB2Q14146 1524 aaKnown RBP16.42■□□□□ 0.22
EXOSC8-208ENST00000488779 DNMBPQ6XZF7 1577 aa16.35■□□□□ 0.21
EXOSC8-208ENST00000488779 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
EXOSC8-208ENST00000488779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.23e-7■■□□□ 14.4
EXOSC8-208ENST00000488779 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
EXOSC8-208ENST00000488779 CUX1P39880 1505 aa16.21■□□□□ 0.19
EXOSC8-208ENST00000488779 POLA1P09884 1462 aaPredicted RBP16.21■□□□□ 0.19
EXOSC8-208ENST00000488779 WDR97A6NE52 1622 aa16.17■□□□□ 0.18
EXOSC8-208ENST00000488779 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
EXOSC8-208ENST00000488779 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
EXOSC8-208ENST00000488779 KCNA4P22459 653 aa16.15■□□□□ 0.18
EXOSC8-208ENST00000488779 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
EXOSC8-208ENST00000488779 SOGA1O94964 1423 aa16.14■□□□□ 0.17
EXOSC8-208ENST00000488779 TOP2BQ02880 1626 aa16.12■□□□□ 0.17
EXOSC8-208ENST00000488779 BIVM-ERCC5R4GMW8 1640 aa16.11■□□□□ 0.17
EXOSC8-208ENST00000488779 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
EXOSC8-208ENST00000488779 DNAJC5Q9H3Z4 198 aa16.09■□□□□ 0.17
EXOSC8-208ENST00000488779 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.16
EXOSC8-208ENST00000488779 RAD54L2Q9Y4B4 1467 aa16.07■□□□□ 0.16
EXOSC8-208ENST00000488779 ABCA10Q8WWZ4 1543 aa16.06■□□□□ 0.16
EXOSC8-208ENST00000488779 SYNJ1O43426 1573 aa16.04■□□□□ 0.16
EXOSC8-208ENST00000488779 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.168e-7■■■■■ 33.1
EXOSC8-208ENST00000488779 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
EXOSC8-208ENST00000488779 TDRD9Q8NDG6 1382 aaKnown RBP16■□□□□ 0.15
EXOSC8-208ENST00000488779 GRIN2BQ13224 1484 aa15.99■□□□□ 0.15
EXOSC8-208ENST00000488779 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
EXOSC8-208ENST00000488779 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
EXOSC8-208ENST00000488779 OSCARQ8IYS5 282 aa15.96■□□□□ 0.15
EXOSC8-208ENST00000488779 ABCA5Q8WWZ7 1642 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms