RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 NISCHQ9Y2I1 1504 aa32.5■■■□□ 2.79
ATPAF2-207ENST00000488753 CCDC180Q9P1Z9 1646 aa29.07■■■□□ 2.24
ATPAF2-207ENST00000488753 ABCC9O60706 1549 aa28.87■■■□□ 2.21
ATPAF2-207ENST00000488753 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
ATPAF2-207ENST00000488753 NACADO15069 1562 aa27.48■■□□□ 1.99
ATPAF2-207ENST00000488753 DCAF8L2P0C7V8 631 aa27.28■■□□□ 1.96
ATPAF2-207ENST00000488753 MYO15BQ96JP2 1530 aa27.23■■□□□ 1.95
ATPAF2-207ENST00000488753 ZCCHC6Q5VYS8 1495 aaKnown RBP26.98■■□□□ 1.91
ATPAF2-207ENST00000488753 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
ATPAF2-207ENST00000488753 DNAJC5BQ9UF47 199 aa26.92■■□□□ 1.9
ATPAF2-207ENST00000488753 PABPN1Q86U42 306 aaKnown RBP eCLIP26.9■■□□□ 1.9
ATPAF2-207ENST00000488753 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
ATPAF2-207ENST00000488753 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
ATPAF2-207ENST00000488753 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
ATPAF2-207ENST00000488753 SCRIBQ14160 1630 aa26.44■■□□□ 1.82
ATPAF2-207ENST00000488753 EIF4G1Q04637 1599 aaKnown RBP26.1■■□□□ 1.77
ATPAF2-207ENST00000488753 CC2D2AQ9P2K1 1620 aa26.09■■□□□ 1.77
ATPAF2-207ENST00000488753 CECR2Q9BXF3 1484 aa26.03■■□□□ 1.76
ATPAF2-207ENST00000488753 NCAPD3P42695 1498 aa25.39■■□□□ 1.65
ATPAF2-207ENST00000488753 ATAD2BQ9ULI0 1458 aa25.31■■□□□ 1.64
ATPAF2-207ENST00000488753 SMARCA4P51532 1647 aa25.28■■□□□ 1.64
ATPAF2-207ENST00000488753 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
ATPAF2-207ENST00000488753 BAZ1AQ9NRL2 1556 aaPredicted RBP25.23■■□□□ 1.63
ATPAF2-207ENST00000488753 HMGXB3Q12766 1538 aa25.2■■□□□ 1.62
ATPAF2-207ENST00000488753 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
ATPAF2-207ENST00000488753 BAZ1BQ9UIG0 1483 aaKnown RBP25.06■■□□□ 1.6
ATPAF2-207ENST00000488753 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
ATPAF2-207ENST00000488753 ERCC6Q03468 1493 aa24.95■■□□□ 1.58
ATPAF2-207ENST00000488753 CUX2O14529 1486 aa24.89■■□□□ 1.58
ATPAF2-207ENST00000488753 NESP48681 1621 aa24.83■■□□□ 1.57
ATPAF2-207ENST00000488753 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
ATPAF2-207ENST00000488753 WIZO95785 1651 aa24.67■■□□□ 1.54
ATPAF2-207ENST00000488753 DNAJC5Q9H3Z4 198 aa24.66■■□□□ 1.54
ATPAF2-207ENST00000488753 PDS5BQ9NTI5 1447 aa24.64■■□□□ 1.54
ATPAF2-207ENST00000488753 CADPSQ9ULU8 1353 aa24.62■■□□□ 1.53
ATPAF2-207ENST00000488753 RSF1Q96T23 1441 aaPredicted RBP24.59■■□□□ 1.53
ATPAF2-207ENST00000488753 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
ATPAF2-207ENST00000488753 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
ATPAF2-207ENST00000488753 TOP2AP11388 1531 aaKnown RBP24.45■■□□□ 1.5
ATPAF2-207ENST00000488753 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
ATPAF2-207ENST00000488753 CFTRP13569 1480 aa24.37■■□□□ 1.49
ATPAF2-207ENST00000488753 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
ATPAF2-207ENST00000488753 WDR62O43379 1518 aa24.31■■□□□ 1.48
ATPAF2-207ENST00000488753 FANCD2Q9BXW9 1451 aa24.31■■□□□ 1.48
ATPAF2-207ENST00000488753 CCDC88BA6NC98 1476 aa24.16■■□□□ 1.46
ATPAF2-207ENST00000488753 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
ATPAF2-207ENST00000488753 PRDM2Q13029 1718 aa24.03■■□□□ 1.44
ATPAF2-207ENST00000488753 ABCC8Q09428 1581 aa23.88■■□□□ 1.41
ATPAF2-207ENST00000488753 TOPBP1Q92547 1522 aa23.86■■□□□ 1.41
ATPAF2-207ENST00000488753 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
ATPAF2-207ENST00000488753 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
ATPAF2-207ENST00000488753 OSCARQ8IYS5 282 aa23.77■■□□□ 1.4
ATPAF2-207ENST00000488753 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
ATPAF2-207ENST00000488753 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
ATPAF2-207ENST00000488753 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
ATPAF2-207ENST00000488753 EIF4G3O43432 1585 aaKnown RBP23.61■■□□□ 1.37
ATPAF2-207ENST00000488753 SUPT5HO00267 1087 aaKnown RBP23.57■■□□□ 1.36
ATPAF2-207ENST00000488753 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
ATPAF2-207ENST00000488753 AQRO60306 1485 aaKnown RBP eCLIP23.55■■□□□ 1.36
ATPAF2-207ENST00000488753 SOGA1O94964 1423 aa23.54■■□□□ 1.36
ATPAF2-207ENST00000488753 RAD54L2Q9Y4B4 1467 aa23.5■■□□□ 1.35
ATPAF2-207ENST00000488753 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
ATPAF2-207ENST00000488753 CUX1P39880 1505 aa23.49■■□□□ 1.35
ATPAF2-207ENST00000488753 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
ATPAF2-207ENST00000488753 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
ATPAF2-207ENST00000488753 RIMBP3CA6NJZ7 1639 aa23.36■■□□□ 1.33
ATPAF2-207ENST00000488753 RIMBP3BA6NNM3 1639 aa23.36■■□□□ 1.33
ATPAF2-207ENST00000488753 RIMBP3Q9UFD9 1639 aa23.36■■□□□ 1.33
ATPAF2-207ENST00000488753 ARHGEF11O15085 1522 aa23.35■■□□□ 1.33
ATPAF2-207ENST00000488753 FBLN2P98095 1184 aa23.35■■□□□ 1.33
ATPAF2-207ENST00000488753 CHD1O14646 1710 aa23.33■■□□□ 1.33
ATPAF2-207ENST00000488753 GRIN2BQ13224 1484 aa23.32■■□□□ 1.32
ATPAF2-207ENST00000488753 SNAPC4Q5SXM2 1469 aa23.32■■□□□ 1.32
ATPAF2-207ENST00000488753 MAGI1Q96QZ7 1491 aaPredicted RBP23.31■■□□□ 1.32
ATPAF2-207ENST00000488753 ABCA10Q8WWZ4 1543 aa23.28■■□□□ 1.32
ATPAF2-207ENST00000488753 CHMP7Q8WUX9 453 aaPredicted RBP23.25■■□□□ 1.31
ATPAF2-207ENST00000488753 GAPVD1Q14C86 1478 aa23.24■■□□□ 1.31
ATPAF2-207ENST00000488753 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
ATPAF2-207ENST00000488753 SYNJ2O15056 1496 aa23.23■■□□□ 1.31
ATPAF2-207ENST00000488753 ABCA5Q8WWZ7 1642 aa23.19■■□□□ 1.3
ATPAF2-207ENST00000488753 TOP2BQ02880 1626 aa23.18■■□□□ 1.3
ATPAF2-207ENST00000488753 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
ATPAF2-207ENST00000488753 CLASP1Q7Z460 1538 aa23.17■■□□□ 1.3
ATPAF2-207ENST00000488753 CYB5RLQ6IPT4 315 aa23.16■■□□□ 1.3
ATPAF2-207ENST00000488753 BIVM-ERCC5R4GMW8 1640 aa23.15■■□□□ 1.3
ATPAF2-207ENST00000488753 PBRM1Q86U86 1689 aa23.14■■□□□ 1.29
ATPAF2-207ENST00000488753 ARAP1Q96P48 1450 aa23.13■■□□□ 1.29
ATPAF2-207ENST00000488753 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
ATPAF2-207ENST00000488753 ADAMTS12P58397 1594 aa23■■□□□ 1.27
ATPAF2-207ENST00000488753 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
ATPAF2-207ENST00000488753 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
ATPAF2-207ENST00000488753 NUP160Q12769 1436 aa22.95■■□□□ 1.26
ATPAF2-207ENST00000488753 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
ATPAF2-207ENST00000488753 TRHP20396 242 aaPredicted RBP22.83■■□□□ 1.25
ATPAF2-207ENST00000488753 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
ATPAF2-207ENST00000488753 KIF27Q86VH2 1401 aa22.76■■□□□ 1.23
ATPAF2-207ENST00000488753 ERCC6L2Q5T890 1561 aa22.76■■□□□ 1.23
ATPAF2-207ENST00000488753 IGF1RP08069 1367 aa22.74■■□□□ 1.23
ATPAF2-207ENST00000488753 JPH4Q96JJ6 628 aa22.71■■□□□ 1.23
ATPAF2-207ENST00000488753 PRG4Q92954 1404 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms