RNA–Protein interactions for RNA: ENST00000488670.1

TRIP6-207, Transcript of thyroid hormone receptor interactor 6, humanhuman

TSL 3

Gene TRIP6, Length 615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP6-207ENST00000488670 NISCHQ9Y2I1 1504 aa35.91■■■■□ 3.34
TRIP6-207ENST00000488670 CCDC180Q9P1Z9 1646 aa32.13■■■□□ 2.73
TRIP6-207ENST00000488670 ABCC9O60706 1549 aa31.49■■■□□ 2.63
TRIP6-207ENST00000488670 RB1CC1Q8TDY2 1594 aa30.3■■■□□ 2.44
TRIP6-207ENST00000488670 NACADO15069 1562 aa30.23■■■□□ 2.43
TRIP6-207ENST00000488670 MYO15BQ96JP2 1530 aa30.01■■■□□ 2.4
TRIP6-207ENST00000488670 DCAF8L2P0C7V8 631 aa29.92■■■□□ 2.38
TRIP6-207ENST00000488670 ZCCHC6Q5VYS8 1495 aaKnown RBP29.88■■■□□ 2.37
TRIP6-207ENST00000488670 DCAF1Q9Y4B6 1507 aa29.79■■■□□ 2.36
TRIP6-207ENST00000488670 UNC13AQ9UPW8 1703 aa29.6■■■□□ 2.33
TRIP6-207ENST00000488670 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
TRIP6-207ENST00000488670 PABPN1Q86U42 306 aaKnown RBP eCLIP29.3■■■□□ 2.28
TRIP6-207ENST00000488670 SHROOM4Q9ULL8 1493 aa29.16■■■□□ 2.26
TRIP6-207ENST00000488670 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
TRIP6-207ENST00000488670 DNAJC5BQ9UF47 199 aa29.03■■■□□ 2.24
TRIP6-207ENST00000488670 EIF4G1Q04637 1599 aaKnown RBP28.61■■■□□ 2.17
TRIP6-207ENST00000488670 CC2D2AQ9P2K1 1620 aa28.53■■■□□ 2.16
TRIP6-207ENST00000488670 CECR2Q9BXF3 1484 aa28.35■■■□□ 2.13
TRIP6-207ENST00000488670 SMARCA4P51532 1647 aa27.93■■■□□ 2.06
TRIP6-207ENST00000488670 BAZ1AQ9NRL2 1556 aaPredicted RBP27.89■■■□□ 2.05
TRIP6-207ENST00000488670 NCAPD3P42695 1498 aa27.86■■■□□ 2.05
TRIP6-207ENST00000488670 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
TRIP6-207ENST00000488670 ATAD2BQ9ULI0 1458 aa27.81■■■□□ 2.04
TRIP6-207ENST00000488670 HMGXB3Q12766 1538 aa27.74■■■□□ 2.03
TRIP6-207ENST00000488670 PEG3Q9GZU2 1588 aa27.71■■■□□ 2.03
TRIP6-207ENST00000488670 MROH2BQ7Z745 1585 aa27.63■■■□□ 2.01
TRIP6-207ENST00000488670 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
TRIP6-207ENST00000488670 WIZO95785 1651 aa27.33■■□□□ 1.97
TRIP6-207ENST00000488670 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
TRIP6-207ENST00000488670 LAMC3Q9Y6N6 1575 aa27.19■■□□□ 1.94
TRIP6-207ENST00000488670 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
TRIP6-207ENST00000488670 NESP48681 1621 aa27.17■■□□□ 1.94
TRIP6-207ENST00000488670 TOP2AP11388 1531 aaKnown RBP27.08■■□□□ 1.93
TRIP6-207ENST00000488670 CUX2O14529 1486 aa27.06■■□□□ 1.92
TRIP6-207ENST00000488670 CADPSQ9ULU8 1353 aa27■■□□□ 1.91
TRIP6-207ENST00000488670 PDS5BQ9NTI5 1447 aa26.98■■□□□ 1.91
TRIP6-207ENST00000488670 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
TRIP6-207ENST00000488670 THOC2Q8NI27 1593 aaKnown RBP26.91■■□□□ 1.9
TRIP6-207ENST00000488670 CFTRP13569 1480 aa26.81■■□□□ 1.88
TRIP6-207ENST00000488670 MRC2Q9UBG0 1479 aa26.71■■□□□ 1.87
TRIP6-207ENST00000488670 CEP164Q9UPV0 1460 aa26.7■■□□□ 1.87
TRIP6-207ENST00000488670 CCDC88BA6NC98 1476 aa26.69■■□□□ 1.86
TRIP6-207ENST00000488670 PRDM2Q13029 1718 aa26.69■■□□□ 1.86
TRIP6-207ENST00000488670 FANCD2Q9BXW9 1451 aa26.68■■□□□ 1.86
TRIP6-207ENST00000488670 WDR62O43379 1518 aa26.65■■□□□ 1.86
TRIP6-207ENST00000488670 URB2Q14146 1524 aaKnown RBP26.43■■□□□ 1.82
TRIP6-207ENST00000488670 DNAJC5Q9H3Z4 198 aa26.41■■□□□ 1.82
TRIP6-207ENST00000488670 ABCC8Q09428 1581 aa26.3■■□□□ 1.8
TRIP6-207ENST00000488670 SUPT5HO00267 1087 aaKnown RBP26.25■■□□□ 1.79
TRIP6-207ENST00000488670 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
TRIP6-207ENST00000488670 DNMBPQ6XZF7 1577 aa26.23■■□□□ 1.79
TRIP6-207ENST00000488670 IFT140Q96RY7 1462 aa26.16■■□□□ 1.78
TRIP6-207ENST00000488670 TARBP1Q13395 1621 aaKnown RBP26■■□□□ 1.75
TRIP6-207ENST00000488670 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
TRIP6-207ENST00000488670 ZNF608Q9ULD9 1512 aaPredicted RBP25.98■■□□□ 1.75
TRIP6-207ENST00000488670 CUX1P39880 1505 aa25.95■■□□□ 1.74
TRIP6-207ENST00000488670 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.74
TRIP6-207ENST00000488670 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
TRIP6-207ENST00000488670 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
TRIP6-207ENST00000488670 SOGA1O94964 1423 aa25.87■■□□□ 1.73
TRIP6-207ENST00000488670 RAD54L2Q9Y4B4 1467 aa25.84■■□□□ 1.73
TRIP6-207ENST00000488670 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
TRIP6-207ENST00000488670 AQRO60306 1485 aaKnown RBP eCLIP25.79■■□□□ 1.726e-7■■■□□ 17.9
TRIP6-207ENST00000488670 BIVM-ERCC5R4GMW8 1640 aa25.74■■□□□ 1.71
TRIP6-207ENST00000488670 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
TRIP6-207ENST00000488670 TOP2BQ02880 1626 aa25.71■■□□□ 1.71
TRIP6-207ENST00000488670 WRNQ14191 1432 aaPredicted RBP eCLIP25.71■■□□□ 1.71
TRIP6-207ENST00000488670 ABCA10Q8WWZ4 1543 aa25.67■■□□□ 1.7
TRIP6-207ENST00000488670 CHD1O14646 1710 aa25.66■■□□□ 1.7
TRIP6-207ENST00000488670 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
TRIP6-207ENST00000488670 GRIN2BQ13224 1484 aa25.64■■□□□ 1.69
TRIP6-207ENST00000488670 MAGI1Q96QZ7 1491 aaPredicted RBP25.62■■□□□ 1.69
TRIP6-207ENST00000488670 ABCA5Q8WWZ7 1642 aa25.61■■□□□ 1.69
TRIP6-207ENST00000488670 SNAPC4Q5SXM2 1469 aa25.6■■□□□ 1.69
TRIP6-207ENST00000488670 PBRM1Q86U86 1689 aa25.6■■□□□ 1.69
TRIP6-207ENST00000488670 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
TRIP6-207ENST00000488670 SYNJ2O15056 1496 aa25.5■■□□□ 1.67
TRIP6-207ENST00000488670 FBLN2P98095 1184 aa25.49■■□□□ 1.67
TRIP6-207ENST00000488670 RIMBP3CA6NJZ7 1639 aa25.46■■□□□ 1.67
TRIP6-207ENST00000488670 RIMBP3BA6NNM3 1639 aa25.46■■□□□ 1.67
TRIP6-207ENST00000488670 RIMBP3Q9UFD9 1639 aa25.46■■□□□ 1.67
TRIP6-207ENST00000488670 CHMP7Q8WUX9 453 aaPredicted RBP25.44■■□□□ 1.66
TRIP6-207ENST00000488670 ARHGEF11O15085 1522 aa25.43■■□□□ 1.66
TRIP6-207ENST00000488670 CLASP1Q7Z460 1538 aa25.39■■□□□ 1.66
TRIP6-207ENST00000488670 ERICH3Q5RHP9 1530 aa25.38■■□□□ 1.65
TRIP6-207ENST00000488670 ADAMTS12P58397 1594 aa25.37■■□□□ 1.65
TRIP6-207ENST00000488670 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
TRIP6-207ENST00000488670 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
TRIP6-207ENST00000488670 GRIN2AQ12879 1464 aa25.3■■□□□ 1.64
TRIP6-207ENST00000488670 NUP160Q12769 1436 aa25.21■■□□□ 1.63
TRIP6-207ENST00000488670 ARAP1Q96P48 1450 aa25.2■■□□□ 1.62
TRIP6-207ENST00000488670 KIF27Q86VH2 1401 aa25.2■■□□□ 1.62
TRIP6-207ENST00000488670 CEP170Q5SW79 1584 aa25.17■■□□□ 1.62
TRIP6-207ENST00000488670 CUL7Q14999 1698 aa25.13■■□□□ 1.61
TRIP6-207ENST00000488670 CYB5RLQ6IPT4 315 aa25.11■■□□□ 1.61
TRIP6-207ENST00000488670 SHROOM2Q13796 1616 aa25.08■■□□□ 1.6
TRIP6-207ENST00000488670 IGF1RP08069 1367 aa25.07■■□□□ 1.6
TRIP6-207ENST00000488670 RUSC2Q8N2Y8 1516 aa25.01■■□□□ 1.59
TRIP6-207ENST00000488670 ERCC6L2Q5T890 1561 aa24.94■■□□□ 1.58
TRIP6-207ENST00000488670 CARMIL1Q5VZK9 1371 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms