RNA–Protein interactions for RNA: ENST00000488648.5

SKIV2L-212, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5

Gene SKIV2L, Length 720 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-212ENST00000488648 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
SKIV2L-212ENST00000488648 CCDC180Q9P1Z9 1646 aa26■■□□□ 1.75
SKIV2L-212ENST00000488648 ABCC9O60706 1549 aa24.91■■□□□ 1.58
SKIV2L-212ENST00000488648 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
SKIV2L-212ENST00000488648 DCAF1Q9Y4B6 1507 aa24.3■■□□□ 1.48
SKIV2L-212ENST00000488648 NACADO15069 1562 aa24.29■■□□□ 1.48
SKIV2L-212ENST00000488648 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
SKIV2L-212ENST00000488648 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
SKIV2L-212ENST00000488648 RB1CC1Q8TDY2 1594 aa24.24■■□□□ 1.47
SKIV2L-212ENST00000488648 UNC13AQ9UPW8 1703 aa23.71■■□□□ 1.39
SKIV2L-212ENST00000488648 SCRIBQ14160 1630 aa23.7■■□□□ 1.38
SKIV2L-212ENST00000488648 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
SKIV2L-212ENST00000488648 SHROOM4Q9ULL8 1493 aa23.36■■□□□ 1.33
SKIV2L-212ENST00000488648 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
SKIV2L-212ENST00000488648 EIF4G1Q04637 1599 aaKnown RBP22.78■■□□□ 1.24
SKIV2L-212ENST00000488648 BAZ1AQ9NRL2 1556 aaPredicted RBP22.75■■□□□ 1.23
SKIV2L-212ENST00000488648 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
SKIV2L-212ENST00000488648 SMARCA4P51532 1647 aa22.7■■□□□ 1.22
SKIV2L-212ENST00000488648 CC2D2AQ9P2K1 1620 aa22.59■■□□□ 1.21
SKIV2L-212ENST00000488648 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
SKIV2L-212ENST00000488648 SMARCA2P51531 1590 aa22.49■■□□□ 1.19
SKIV2L-212ENST00000488648 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
SKIV2L-212ENST00000488648 RSF1Q96T23 1441 aaPredicted RBP22.43■■□□□ 1.18
SKIV2L-212ENST00000488648 ATAD2BQ9ULI0 1458 aa22.4■■□□□ 1.18
SKIV2L-212ENST00000488648 WIZO95785 1651 aa22.39■■□□□ 1.18
SKIV2L-212ENST00000488648 HMGXB3Q12766 1538 aa22.34■■□□□ 1.17
SKIV2L-212ENST00000488648 NCAPD3P42695 1498 aa22.32■■□□□ 1.16
SKIV2L-212ENST00000488648 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
SKIV2L-212ENST00000488648 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
SKIV2L-212ENST00000488648 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
SKIV2L-212ENST00000488648 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
SKIV2L-212ENST00000488648 CCDC88BA6NC98 1476 aa21.86■■□□□ 1.09
SKIV2L-212ENST00000488648 LAMC3Q9Y6N6 1575 aa21.76■■□□□ 1.07
SKIV2L-212ENST00000488648 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
SKIV2L-212ENST00000488648 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
SKIV2L-212ENST00000488648 CFTRP13569 1480 aa21.66■■□□□ 1.06
SKIV2L-212ENST00000488648 NESP48681 1621 aa21.65■■□□□ 1.06
SKIV2L-212ENST00000488648 PDS5BQ9NTI5 1447 aa21.56■■□□□ 1.04
SKIV2L-212ENST00000488648 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
SKIV2L-212ENST00000488648 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
SKIV2L-212ENST00000488648 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
SKIV2L-212ENST00000488648 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
SKIV2L-212ENST00000488648 MRC2Q9UBG0 1479 aa21.33■■□□□ 1.01
SKIV2L-212ENST00000488648 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
SKIV2L-212ENST00000488648 ABCC8Q09428 1581 aa21.26■□□□□ 0.99
SKIV2L-212ENST00000488648 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
SKIV2L-212ENST00000488648 WDR62O43379 1518 aa21.24■□□□□ 0.99
SKIV2L-212ENST00000488648 URB2Q14146 1524 aaKnown RBP21.22■□□□□ 0.99
SKIV2L-212ENST00000488648 WRNQ14191 1432 aaPredicted RBP eCLIP21.2■□□□□ 0.98
SKIV2L-212ENST00000488648 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
SKIV2L-212ENST00000488648 BIVM-ERCC5R4GMW8 1640 aa21.17■□□□□ 0.98
SKIV2L-212ENST00000488648 CUX1P39880 1505 aa21.16■□□□□ 0.98
SKIV2L-212ENST00000488648 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
SKIV2L-212ENST00000488648 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
SKIV2L-212ENST00000488648 CUX2O14529 1486 aa21.13■□□□□ 0.97
SKIV2L-212ENST00000488648 FGD5Q6ZNL6 1462 aa21.05■□□□□ 0.96
SKIV2L-212ENST00000488648 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.96
SKIV2L-212ENST00000488648 IFT140Q96RY7 1462 aa20.97■□□□□ 0.95
SKIV2L-212ENST00000488648 TRIM41Q8WV44 630 aa20.95■□□□□ 0.94
SKIV2L-212ENST00000488648 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
SKIV2L-212ENST00000488648 SOGA1O94964 1423 aa20.93■□□□□ 0.94
SKIV2L-212ENST00000488648 WDR97A6NE52 1622 aa20.93■□□□□ 0.94
SKIV2L-212ENST00000488648 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.93
SKIV2L-212ENST00000488648 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
SKIV2L-212ENST00000488648 ABCA10Q8WWZ4 1543 aa20.86■□□□□ 0.93
SKIV2L-212ENST00000488648 EIF4G3O43432 1585 aaKnown RBP20.82■□□□□ 0.92
SKIV2L-212ENST00000488648 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
SKIV2L-212ENST00000488648 ZNF608Q9ULD9 1512 aaPredicted RBP20.77■□□□□ 0.92
SKIV2L-212ENST00000488648 PBRM1Q86U86 1689 aa20.77■□□□□ 0.91
SKIV2L-212ENST00000488648 KIF27Q86VH2 1401 aa20.74■□□□□ 0.91
SKIV2L-212ENST00000488648 GAPVD1Q14C86 1478 aa20.73■□□□□ 0.91
SKIV2L-212ENST00000488648 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
SKIV2L-212ENST00000488648 AQRO60306 1485 aaKnown RBP eCLIP20.7■□□□□ 0.93e-8■■■■■ 35.4
SKIV2L-212ENST00000488648 GRIN2BQ13224 1484 aa20.68■□□□□ 0.9
SKIV2L-212ENST00000488648 ERICH3Q5RHP9 1530 aa20.66■□□□□ 0.9
SKIV2L-212ENST00000488648 EEA1Q15075 1411 aa20.65■□□□□ 0.9
SKIV2L-212ENST00000488648 CUL7Q14999 1698 aa20.62■□□□□ 0.89
SKIV2L-212ENST00000488648 MAGI1Q96QZ7 1491 aaPredicted RBP20.6■□□□□ 0.89
SKIV2L-212ENST00000488648 SNAPC4Q5SXM2 1469 aa20.58■□□□□ 0.89
SKIV2L-212ENST00000488648 ADAMTS12P58397 1594 aa20.57■□□□□ 0.88
SKIV2L-212ENST00000488648 RUSC2Q8N2Y8 1516 aa20.57■□□□□ 0.88
SKIV2L-212ENST00000488648 CHD1O14646 1710 aa20.52■□□□□ 0.88
SKIV2L-212ENST00000488648 FHAD1B1AJZ9 1412 aa20.51■□□□□ 0.87
SKIV2L-212ENST00000488648 IGF1RP08069 1367 aa20.5■□□□□ 0.87
SKIV2L-212ENST00000488648 SYNJ2O15056 1496 aa20.5■□□□□ 0.87
SKIV2L-212ENST00000488648 FAM9AQ8IZU1 332 aaPredicted RBP20.47■□□□□ 0.87
SKIV2L-212ENST00000488648 CSRNP3Q8WYN3 585 aa20.45■□□□□ 0.86
SKIV2L-212ENST00000488648 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
SKIV2L-212ENST00000488648 KIF21BO75037 1637 aa20.42■□□□□ 0.86
SKIV2L-212ENST00000488648 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
SKIV2L-212ENST00000488648 FBLN2P98095 1184 aa20.41■□□□□ 0.86
SKIV2L-212ENST00000488648 GRIN2AQ12879 1464 aa20.41■□□□□ 0.86
SKIV2L-212ENST00000488648 RAPGEF2Q9Y4G8 1499 aa20.41■□□□□ 0.86
SKIV2L-212ENST00000488648 PRXQ9BXM0 1461 aa20.39■□□□□ 0.85
SKIV2L-212ENST00000488648 CTTNBP2Q8WZ74 1663 aa20.32■□□□□ 0.84
SKIV2L-212ENST00000488648 GOLGA3Q08378 1498 aa20.3■□□□□ 0.84
SKIV2L-212ENST00000488648 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
SKIV2L-212ENST00000488648 NUP160Q12769 1436 aa20.27■□□□□ 0.83
SKIV2L-212ENST00000488648 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
SKIV2L-212ENST00000488648 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms