RNA–Protein interactions for RNA: ENST00000488443.1

UBAP2-211, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-211ENST00000488443 NISCHQ9Y2I1 1504 aa33.37■■■□□ 2.93
UBAP2-211ENST00000488443 ABCC9O60706 1549 aa30.24■■■□□ 2.43
UBAP2-211ENST00000488443 CCDC180Q9P1Z9 1646 aa29.98■■■□□ 2.39
UBAP2-211ENST00000488443 RB1CC1Q8TDY2 1594 aa28.62■■■□□ 2.17
UBAP2-211ENST00000488443 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.14
UBAP2-211ENST00000488443 DNAJC5BQ9UF47 199 aa28.4■■■□□ 2.14
UBAP2-211ENST00000488443 NACADO15069 1562 aa28.34■■■□□ 2.13
UBAP2-211ENST00000488443 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.1
UBAP2-211ENST00000488443 UNC13AQ9UPW8 1703 aa28.07■■■□□ 2.08
UBAP2-211ENST00000488443 BICRAQ9NZM4 1560 aa27.79■■■□□ 2.04
UBAP2-211ENST00000488443 MYO15BQ96JP2 1530 aa27.78■■■□□ 2.04
UBAP2-211ENST00000488443 ZCCHC6Q5VYS8 1495 aaKnown RBP27.63■■■□□ 2.01
UBAP2-211ENST00000488443 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
UBAP2-211ENST00000488443 DCAF1Q9Y4B6 1507 aa27.43■■□□□ 1.98
UBAP2-211ENST00000488443 CC2D2AQ9P2K1 1620 aa27.26■■□□□ 1.95
UBAP2-211ENST00000488443 SHROOM4Q9ULL8 1493 aa27.24■■□□□ 1.95
UBAP2-211ENST00000488443 CECR2Q9BXF3 1484 aa27.19■■□□□ 1.94
UBAP2-211ENST00000488443 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.93
UBAP2-211ENST00000488443 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
UBAP2-211ENST00000488443 ERCC6Q03468 1493 aa26.11■■□□□ 1.77
UBAP2-211ENST00000488443 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
UBAP2-211ENST00000488443 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
UBAP2-211ENST00000488443 DNAJC5Q9H3Z4 198 aa26.07■■□□□ 1.76
UBAP2-211ENST00000488443 SMARCA2P51531 1590 aa26.02■■□□□ 1.76
UBAP2-211ENST00000488443 HMGXB3Q12766 1538 aa25.96■■□□□ 1.75
UBAP2-211ENST00000488443 CUX2O14529 1486 aa25.95■■□□□ 1.74
UBAP2-211ENST00000488443 NESP48681 1621 aa25.94■■□□□ 1.74
UBAP2-211ENST00000488443 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
UBAP2-211ENST00000488443 BAZ1BQ9UIG0 1483 aaKnown RBP25.91■■□□□ 1.74
UBAP2-211ENST00000488443 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
UBAP2-211ENST00000488443 PEG3Q9GZU2 1588 aa25.72■■□□□ 1.71
UBAP2-211ENST00000488443 THOC2Q8NI27 1593 aaKnown RBP25.64■■□□□ 1.69
UBAP2-211ENST00000488443 KIF21AQ7Z4S6 1674 aa25.62■■□□□ 1.69
UBAP2-211ENST00000488443 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
UBAP2-211ENST00000488443 WIZO95785 1651 aa25.52■■□□□ 1.68
UBAP2-211ENST00000488443 PDS5BQ9NTI5 1447 aa25.47■■□□□ 1.67
UBAP2-211ENST00000488443 CADPSQ9ULU8 1353 aa25.38■■□□□ 1.65
UBAP2-211ENST00000488443 MRC2Q9UBG0 1479 aa25.31■■□□□ 1.64
UBAP2-211ENST00000488443 WDR62O43379 1518 aa25.22■■□□□ 1.63
UBAP2-211ENST00000488443 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
UBAP2-211ENST00000488443 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
UBAP2-211ENST00000488443 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
UBAP2-211ENST00000488443 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
UBAP2-211ENST00000488443 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
UBAP2-211ENST00000488443 CFTRP13569 1480 aa25.05■■□□□ 1.6
UBAP2-211ENST00000488443 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
UBAP2-211ENST00000488443 PRDM2Q13029 1718 aa24.9■■□□□ 1.58
UBAP2-211ENST00000488443 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
UBAP2-211ENST00000488443 OSCARQ8IYS5 282 aa24.79■■□□□ 1.56
UBAP2-211ENST00000488443 ZNF608Q9ULD9 1512 aaPredicted RBP24.71■■□□□ 1.55
UBAP2-211ENST00000488443 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
UBAP2-211ENST00000488443 IFT140Q96RY7 1462 aa24.65■■□□□ 1.54
UBAP2-211ENST00000488443 EIF4G3O43432 1585 aaKnown RBP24.57■■□□□ 1.52
UBAP2-211ENST00000488443 RIMBP3CA6NJZ7 1639 aa24.57■■□□□ 1.52
UBAP2-211ENST00000488443 RIMBP3BA6NNM3 1639 aa24.57■■□□□ 1.52
UBAP2-211ENST00000488443 RIMBP3Q9UFD9 1639 aa24.57■■□□□ 1.52
UBAP2-211ENST00000488443 DNMBPQ6XZF7 1577 aa24.56■■□□□ 1.52
UBAP2-211ENST00000488443 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
UBAP2-211ENST00000488443 AQRO60306 1485 aaKnown RBP eCLIP24.47■■□□□ 1.511e-6■■■□□ 17.3
UBAP2-211ENST00000488443 CHD1O14646 1710 aa24.46■■□□□ 1.51
UBAP2-211ENST00000488443 ARHGEF11O15085 1522 aa24.44■■□□□ 1.5
UBAP2-211ENST00000488443 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
UBAP2-211ENST00000488443 FBLN2P98095 1184 aa24.43■■□□□ 1.5
UBAP2-211ENST00000488443 POLA1P09884 1462 aaPredicted RBP24.4■■□□□ 1.5
UBAP2-211ENST00000488443 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
UBAP2-211ENST00000488443 CYB5RLQ6IPT4 315 aa24.32■■□□□ 1.48
UBAP2-211ENST00000488443 TDRD9Q8NDG6 1382 aaKnown RBP24.3■■□□□ 1.48
UBAP2-211ENST00000488443 SOGA1O94964 1423 aa24.29■■□□□ 1.48
UBAP2-211ENST00000488443 FGD5Q6ZNL6 1462 aa24.27■■□□□ 1.48
UBAP2-211ENST00000488443 CUX1P39880 1505 aa24.22■■□□□ 1.47
UBAP2-211ENST00000488443 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
UBAP2-211ENST00000488443 ARAP1Q96P48 1450 aa24.19■■□□□ 1.46
UBAP2-211ENST00000488443 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
UBAP2-211ENST00000488443 TRHP20396 242 aaPredicted RBP24.15■■□□□ 1.46
UBAP2-211ENST00000488443 CHMP7Q8WUX9 453 aaPredicted RBP24.13■■□□□ 1.45
UBAP2-211ENST00000488443 WDR97A6NE52 1622 aa24.08■■□□□ 1.45
UBAP2-211ENST00000488443 PBRM1Q86U86 1689 aa24.08■■□□□ 1.44
UBAP2-211ENST00000488443 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
UBAP2-211ENST00000488443 SYNJ1O43426 1573 aa24.07■■□□□ 1.44
UBAP2-211ENST00000488443 MAGI1Q96QZ7 1491 aaPredicted RBP24.06■■□□□ 1.44
UBAP2-211ENST00000488443 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
UBAP2-211ENST00000488443 SYNJ2O15056 1496 aa24■■□□□ 1.43
UBAP2-211ENST00000488443 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
UBAP2-211ENST00000488443 ABCA5Q8WWZ7 1642 aa23.92■■□□□ 1.42
UBAP2-211ENST00000488443 ABCA10Q8WWZ4 1543 aa23.91■■□□□ 1.42
UBAP2-211ENST00000488443 WRNQ14191 1432 aaPredicted RBP eCLIP23.81■■□□□ 1.4
UBAP2-211ENST00000488443 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
UBAP2-211ENST00000488443 BIVM-ERCC5R4GMW8 1640 aa23.78■■□□□ 1.4
UBAP2-211ENST00000488443 GRIN2AQ12879 1464 aa23.78■■□□□ 1.4
UBAP2-211ENST00000488443 ERCC6L2Q5T890 1561 aa23.78■■□□□ 1.4
UBAP2-211ENST00000488443 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
UBAP2-211ENST00000488443 CEP170Q5SW79 1584 aa23.74■■□□□ 1.39
UBAP2-211ENST00000488443 FHAD1B1AJZ9 1412 aa23.65■■□□□ 1.38
UBAP2-211ENST00000488443 NUP160Q12769 1436 aa23.65■■□□□ 1.38
UBAP2-211ENST00000488443 ERICH3Q5RHP9 1530 aa23.6■■□□□ 1.37
UBAP2-211ENST00000488443 SHROOM2Q13796 1616 aa23.58■■□□□ 1.36
UBAP2-211ENST00000488443 PRG4Q92954 1404 aaPredicted RBP23.51■■□□□ 1.35
UBAP2-211ENST00000488443 AEBP2Q6ZN18 517 aaPredicted RBP23.51■■□□□ 1.35
UBAP2-211ENST00000488443 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
UBAP2-211ENST00000488443 JPH4Q96JJ6 628 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms