RNA–Protein interactions for RNA: ENST00000488440.2

RN7SL477P-201, Transcript of RNA, 7SL, cytoplasmic 477, pseudogene, humanhuman

BASIC

Gene RN7SL477P, Length 286 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL477P-201ENST00000488440 NISCHQ9Y2I1 1504 aa30.87■■■□□ 2.53
RN7SL477P-201ENST00000488440 ABCC9O60706 1549 aa27.72■■■□□ 2.03
RN7SL477P-201ENST00000488440 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
RN7SL477P-201ENST00000488440 RB1CC1Q8TDY2 1594 aa26.33■■□□□ 1.81
RN7SL477P-201ENST00000488440 NACADO15069 1562 aa26.15■■□□□ 1.78
RN7SL477P-201ENST00000488440 DCAF8L2P0C7V8 631 aa26.05■■□□□ 1.76
RN7SL477P-201ENST00000488440 DNAJC5BQ9UF47 199 aa25.95■■□□□ 1.74
RN7SL477P-201ENST00000488440 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
RN7SL477P-201ENST00000488440 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
RN7SL477P-201ENST00000488440 UNC13AQ9UPW8 1703 aa25.75■■□□□ 1.71
RN7SL477P-201ENST00000488440 ZCCHC6Q5VYS8 1495 aaKnown RBP25.61■■□□□ 1.69
RN7SL477P-201ENST00000488440 BICRAQ9NZM4 1560 aa25.6■■□□□ 1.69
RN7SL477P-201ENST00000488440 DCAF1Q9Y4B6 1507 aa25.46■■□□□ 1.67
RN7SL477P-201ENST00000488440 SCRIBQ14160 1630 aa25.29■■□□□ 1.64
RN7SL477P-201ENST00000488440 SHROOM4Q9ULL8 1493 aa25.2■■□□□ 1.62
RN7SL477P-201ENST00000488440 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
RN7SL477P-201ENST00000488440 EIF4G1Q04637 1599 aaKnown RBP24.97■■□□□ 1.59
RN7SL477P-201ENST00000488440 CECR2Q9BXF3 1484 aa24.94■■□□□ 1.58
RN7SL477P-201ENST00000488440 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
RN7SL477P-201ENST00000488440 ATAD2BQ9ULI0 1458 aa24.1■■□□□ 1.45
RN7SL477P-201ENST00000488440 SMARCA4P51532 1647 aa24.09■■□□□ 1.45
RN7SL477P-201ENST00000488440 SMARCA2P51531 1590 aa24.01■■□□□ 1.43
RN7SL477P-201ENST00000488440 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
RN7SL477P-201ENST00000488440 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.43
RN7SL477P-201ENST00000488440 ERCC6Q03468 1493 aa23.91■■□□□ 1.42
RN7SL477P-201ENST00000488440 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
RN7SL477P-201ENST00000488440 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
RN7SL477P-201ENST00000488440 CUX2O14529 1486 aa23.82■■□□□ 1.4
RN7SL477P-201ENST00000488440 NESP48681 1621 aa23.82■■□□□ 1.4
RN7SL477P-201ENST00000488440 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
RN7SL477P-201ENST00000488440 DNAJC5Q9H3Z4 198 aa23.75■■□□□ 1.39
RN7SL477P-201ENST00000488440 LAMC3Q9Y6N6 1575 aa23.61■■□□□ 1.37
RN7SL477P-201ENST00000488440 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
RN7SL477P-201ENST00000488440 WIZO95785 1651 aa23.53■■□□□ 1.36
RN7SL477P-201ENST00000488440 KIF21AQ7Z4S6 1674 aa23.49■■□□□ 1.35
RN7SL477P-201ENST00000488440 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
RN7SL477P-201ENST00000488440 CADPSQ9ULU8 1353 aa23.41■■□□□ 1.34
RN7SL477P-201ENST00000488440 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
RN7SL477P-201ENST00000488440 MRC2Q9UBG0 1479 aa23.29■■□□□ 1.32
RN7SL477P-201ENST00000488440 WDR62O43379 1518 aa23.23■■□□□ 1.31
RN7SL477P-201ENST00000488440 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
RN7SL477P-201ENST00000488440 CEP164Q9UPV0 1460 aa23.2■■□□□ 1.3
RN7SL477P-201ENST00000488440 FANCD2Q9BXW9 1451 aa23.18■■□□□ 1.3
RN7SL477P-201ENST00000488440 CFTRP13569 1480 aa23.16■■□□□ 1.3
RN7SL477P-201ENST00000488440 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
RN7SL477P-201ENST00000488440 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
RN7SL477P-201ENST00000488440 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
RN7SL477P-201ENST00000488440 TRIM41Q8WV44 630 aa22.79■■□□□ 1.24
RN7SL477P-201ENST00000488440 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
RN7SL477P-201ENST00000488440 ZNF608Q9ULD9 1512 aaPredicted RBP22.72■■□□□ 1.23
RN7SL477P-201ENST00000488440 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
RN7SL477P-201ENST00000488440 OSCARQ8IYS5 282 aa22.7■■□□□ 1.22
RN7SL477P-201ENST00000488440 DNMBPQ6XZF7 1577 aa22.66■■□□□ 1.22
RN7SL477P-201ENST00000488440 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
RN7SL477P-201ENST00000488440 EIF4G3O43432 1585 aaKnown RBP22.6■■□□□ 1.21
RN7SL477P-201ENST00000488440 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
RN7SL477P-201ENST00000488440 POLA1P09884 1462 aaPredicted RBP22.52■■□□□ 1.2
RN7SL477P-201ENST00000488440 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.19
RN7SL477P-201ENST00000488440 RIMBP3CA6NJZ7 1639 aa22.47■■□□□ 1.19
RN7SL477P-201ENST00000488440 RIMBP3BA6NNM3 1639 aa22.47■■□□□ 1.19
RN7SL477P-201ENST00000488440 RIMBP3Q9UFD9 1639 aa22.47■■□□□ 1.19
RN7SL477P-201ENST00000488440 RAD54L2Q9Y4B4 1467 aa22.46■■□□□ 1.19
RN7SL477P-201ENST00000488440 ARHGEF11O15085 1522 aa22.41■■□□□ 1.18
RN7SL477P-201ENST00000488440 CHD1O14646 1710 aa22.4■■□□□ 1.18
RN7SL477P-201ENST00000488440 FGD5Q6ZNL6 1462 aa22.39■■□□□ 1.17
RN7SL477P-201ENST00000488440 SOGA1O94964 1423 aa22.39■■□□□ 1.17
RN7SL477P-201ENST00000488440 CUX1P39880 1505 aa22.37■■□□□ 1.17
RN7SL477P-201ENST00000488440 TDRD9Q8NDG6 1382 aaKnown RBP22.37■■□□□ 1.17
RN7SL477P-201ENST00000488440 FBLN2P98095 1184 aa22.34■■□□□ 1.17
RN7SL477P-201ENST00000488440 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
RN7SL477P-201ENST00000488440 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
RN7SL477P-201ENST00000488440 WDR97A6NE52 1622 aa22.27■■□□□ 1.16
RN7SL477P-201ENST00000488440 CYB5RLQ6IPT4 315 aa22.21■■□□□ 1.15
RN7SL477P-201ENST00000488440 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
RN7SL477P-201ENST00000488440 GRIN2BQ13224 1484 aa22.2■■□□□ 1.14
RN7SL477P-201ENST00000488440 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
RN7SL477P-201ENST00000488440 CLASP1Q7Z460 1538 aa22.16■■□□□ 1.14
RN7SL477P-201ENST00000488440 CHMP7Q8WUX9 453 aaPredicted RBP22.15■■□□□ 1.14
RN7SL477P-201ENST00000488440 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
RN7SL477P-201ENST00000488440 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
RN7SL477P-201ENST00000488440 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
RN7SL477P-201ENST00000488440 SYNJ2O15056 1496 aa22.12■■□□□ 1.13
RN7SL477P-201ENST00000488440 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
RN7SL477P-201ENST00000488440 ABCA5Q8WWZ7 1642 aa22.09■■□□□ 1.13
RN7SL477P-201ENST00000488440 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
RN7SL477P-201ENST00000488440 TOP2BQ02880 1626 aa22■■□□□ 1.11
RN7SL477P-201ENST00000488440 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
RN7SL477P-201ENST00000488440 TRHP20396 242 aaPredicted RBP21.97■■□□□ 1.11
RN7SL477P-201ENST00000488440 ADAMTS12P58397 1594 aa21.95■■□□□ 1.1
RN7SL477P-201ENST00000488440 GRIN2AQ12879 1464 aa21.93■■□□□ 1.1
RN7SL477P-201ENST00000488440 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
RN7SL477P-201ENST00000488440 ERCC6L2Q5T890 1561 aa21.85■■□□□ 1.09
RN7SL477P-201ENST00000488440 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
RN7SL477P-201ENST00000488440 NUP160Q12769 1436 aa21.84■■□□□ 1.09
RN7SL477P-201ENST00000488440 ERICH3Q5RHP9 1530 aa21.82■■□□□ 1.08
RN7SL477P-201ENST00000488440 SHROOM2Q13796 1616 aa21.74■■□□□ 1.07
RN7SL477P-201ENST00000488440 PRG4Q92954 1404 aaPredicted RBP21.64■■□□□ 1.06
RN7SL477P-201ENST00000488440 RUSC2Q8N2Y8 1516 aa21.64■■□□□ 1.05
RN7SL477P-201ENST00000488440 JPH4Q96JJ6 628 aa21.58■■□□□ 1.05
RN7SL477P-201ENST00000488440 KIF27Q86VH2 1401 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms