RNA–Protein interactions for RNA: ENST00000488385.1

TCTA-204, Transcript of T cell leukemia translocation altered, humanhuman

TSL 2

Gene TCTA, Length 800 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTA-204ENST00000488385 NISCHQ9Y2I1 1504 aa44.19■■■■■ 4.67
TCTA-204ENST00000488385 CCDC180Q9P1Z9 1646 aa39.32■■■■□ 3.88
TCTA-204ENST00000488385 ABCC9O60706 1549 aa38.6■■■■□ 3.77
TCTA-204ENST00000488385 DCAF8L2P0C7V8 631 aa37.07■■■■□ 3.52
TCTA-204ENST00000488385 RB1CC1Q8TDY2 1594 aa37.05■■■■□ 3.52
TCTA-204ENST00000488385 NACADO15069 1562 aa36.96■■■■□ 3.51
TCTA-204ENST00000488385 ZCCHC6Q5VYS8 1495 aaKnown RBP36.81■■■■□ 3.48
TCTA-204ENST00000488385 MYO15BQ96JP2 1530 aa36.66■■■■□ 3.46
TCTA-204ENST00000488385 DCAF1Q9Y4B6 1507 aa36.5■■■■□ 3.43
TCTA-204ENST00000488385 UNC13AQ9UPW8 1703 aa36.24■■■■□ 3.39
TCTA-204ENST00000488385 PABPN1Q86U42 306 aaKnown RBP eCLIP36.07■■■■□ 3.36
TCTA-204ENST00000488385 SCRIBQ14160 1630 aa35.96■■■■□ 3.35
TCTA-204ENST00000488385 BICRAQ9NZM4 1560 aa35.92■■■■□ 3.34
TCTA-204ENST00000488385 DNAJC5BQ9UF47 199 aa35.71■■■■□ 3.31
TCTA-204ENST00000488385 SHROOM4Q9ULL8 1493 aa35.48■■■■□ 3.27
TCTA-204ENST00000488385 EIF4G1Q04637 1599 aaKnown RBP35■■■■□ 3.19
TCTA-204ENST00000488385 CC2D2AQ9P2K1 1620 aa34.88■■■■□ 3.17
TCTA-204ENST00000488385 CECR2Q9BXF3 1484 aa34.66■■■■□ 3.14
TCTA-204ENST00000488385 SMARCA4P51532 1647 aa34.33■■■■□ 3.09
TCTA-204ENST00000488385 BAZ1AQ9NRL2 1556 aaPredicted RBP34.27■■■■□ 3.08
TCTA-204ENST00000488385 ATAD2BQ9ULI0 1458 aa34.13■■■■□ 3.05
TCTA-204ENST00000488385 SMARCA2P51531 1590 aa34.1■■■■□ 3.05
TCTA-204ENST00000488385 MROH2BQ7Z745 1585 aa34.09■■■■□ 3.05
TCTA-204ENST00000488385 NCAPD3P42695 1498 aa34.08■■■■□ 3.05
TCTA-204ENST00000488385 HMGXB3Q12766 1538 aa33.94■■■■□ 3.02
TCTA-204ENST00000488385 PEG3Q9GZU2 1588 aa33.93■■■■□ 3.02
TCTA-204ENST00000488385 BAZ1BQ9UIG0 1483 aaKnown RBP33.88■■■■□ 3.01
TCTA-204ENST00000488385 WIZO95785 1651 aa33.74■■■□□ 2.99
TCTA-204ENST00000488385 RSF1Q96T23 1441 aaPredicted RBP33.65■■■□□ 2.98
TCTA-204ENST00000488385 NESP48681 1621 aa33.38■■■□□ 2.93
TCTA-204ENST00000488385 TOP2AP11388 1531 aaKnown RBP33.35■■■□□ 2.93
TCTA-204ENST00000488385 ERCC6Q03468 1493 aa33.29■■■□□ 2.92
TCTA-204ENST00000488385 LAMC3Q9Y6N6 1575 aa33.23■■■□□ 2.91
TCTA-204ENST00000488385 CADPSQ9ULU8 1353 aa33.11■■■□□ 2.89
TCTA-204ENST00000488385 PDS5BQ9NTI5 1447 aa33.02■■■□□ 2.88
TCTA-204ENST00000488385 KIF21AQ7Z4S6 1674 aa32.99■■■□□ 2.87
TCTA-204ENST00000488385 DNAJC5Q9H3Z4 198 aa32.97■■■□□ 2.87
TCTA-204ENST00000488385 CCDC88BA6NC98 1476 aa32.95■■■□□ 2.87
TCTA-204ENST00000488385 CUX2O14529 1486 aa32.93■■■□□ 2.86
TCTA-204ENST00000488385 CFTRP13569 1480 aa32.9■■■□□ 2.86
TCTA-204ENST00000488385 SUPT5HO00267 1087 aaKnown RBP32.87■■■□□ 2.85
TCTA-204ENST00000488385 THOC2Q8NI27 1593 aaKnown RBP32.86■■■□□ 2.85
TCTA-204ENST00000488385 FANCD2Q9BXW9 1451 aa32.78■■■□□ 2.84
TCTA-204ENST00000488385 CEP164Q9UPV0 1460 aa32.75■■■□□ 2.83
TCTA-204ENST00000488385 MRC2Q9UBG0 1479 aa32.7■■■□□ 2.83
TCTA-204ENST00000488385 PRDM2Q13029 1718 aa32.7■■■□□ 2.83
TCTA-204ENST00000488385 WDR62O43379 1518 aa32.57■■■□□ 2.8
TCTA-204ENST00000488385 URB2Q14146 1524 aaKnown RBP32.45■■■□□ 2.78
TCTA-204ENST00000488385 TOPBP1Q92547 1522 aa32.24■■■□□ 2.75
TCTA-204ENST00000488385 ABCC8Q09428 1581 aa32.19■■■□□ 2.74
TCTA-204ENST00000488385 DNMBPQ6XZF7 1577 aa32.19■■■□□ 2.74
TCTA-204ENST00000488385 IFT140Q96RY7 1462 aa32.03■■■□□ 2.72
TCTA-204ENST00000488385 CUX1P39880 1505 aa31.99■■■□□ 2.71
TCTA-204ENST00000488385 POLA1P09884 1462 aaPredicted RBP31.97■■■□□ 2.71
TCTA-204ENST00000488385 ZNF608Q9ULD9 1512 aaPredicted RBP31.93■■■□□ 2.7
TCTA-204ENST00000488385 FGD5Q6ZNL6 1462 aa31.9■■■□□ 2.7
TCTA-204ENST00000488385 TARBP1Q13395 1621 aaKnown RBP31.88■■■□□ 2.69
TCTA-204ENST00000488385 RAD54L2Q9Y4B4 1467 aa31.85■■■□□ 2.69
TCTA-204ENST00000488385 SOGA1O94964 1423 aa31.83■■■□□ 2.69
TCTA-204ENST00000488385 EIF4G3O43432 1585 aaKnown RBP31.81■■■□□ 2.68
TCTA-204ENST00000488385 WRNQ14191 1432 aaPredicted RBP eCLIP31.76■■■□□ 2.68
TCTA-204ENST00000488385 AQRO60306 1485 aaKnown RBP eCLIP31.74■■■□□ 2.67
TCTA-204ENST00000488385 SYNJ1O43426 1573 aa31.7■■■□□ 2.67
TCTA-204ENST00000488385 TDRD9Q8NDG6 1382 aaKnown RBP31.68■■■□□ 2.66
TCTA-204ENST00000488385 TOP2BQ02880 1626 aa31.68■■■□□ 2.66
TCTA-204ENST00000488385 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
TCTA-204ENST00000488385 WDR97A6NE52 1622 aa31.62■■■□□ 2.65
TCTA-204ENST00000488385 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
TCTA-204ENST00000488385 ABCA10Q8WWZ4 1543 aa31.54■■■□□ 2.64
TCTA-204ENST00000488385 OSCARQ8IYS5 282 aa31.52■■■□□ 2.64
TCTA-204ENST00000488385 GRIN2BQ13224 1484 aa31.46■■■□□ 2.63
TCTA-204ENST00000488385 GAPVD1Q14C86 1478 aa31.46■■■□□ 2.63
TCTA-204ENST00000488385 SNAPC4Q5SXM2 1469 aa31.46■■■□□ 2.63
TCTA-204ENST00000488385 ABCA5Q8WWZ7 1642 aa31.45■■■□□ 2.62
TCTA-204ENST00000488385 CHD1O14646 1710 aa31.44■■■□□ 2.62
TCTA-204ENST00000488385 PBRM1Q86U86 1689 aa31.44■■■□□ 2.62
TCTA-204ENST00000488385 FBLN2P98095 1184 aa31.43■■■□□ 2.62
TCTA-204ENST00000488385 MAGI1Q96QZ7 1491 aaPredicted RBP31.38■■■□□ 2.61
TCTA-204ENST00000488385 CHMP7Q8WUX9 453 aaPredicted RBP31.29■■■□□ 2.6
TCTA-204ENST00000488385 SYNJ2O15056 1496 aa31.27■■■□□ 2.6
TCTA-204ENST00000488385 ADAMTS12P58397 1594 aa31.17■■■□□ 2.58
TCTA-204ENST00000488385 ERICH3Q5RHP9 1530 aa31.16■■■□□ 2.58
TCTA-204ENST00000488385 KIF27Q86VH2 1401 aa31.1■■■□□ 2.57
TCTA-204ENST00000488385 FHAD1B1AJZ9 1412 aa31.08■■■□□ 2.57
TCTA-204ENST00000488385 GRIN2AQ12879 1464 aa31.07■■■□□ 2.56
TCTA-204ENST00000488385 RIMBP3CA6NJZ7 1639 aa31.06■■■□□ 2.56
TCTA-204ENST00000488385 RIMBP3BA6NNM3 1639 aa31.06■■■□□ 2.56
TCTA-204ENST00000488385 RIMBP3Q9UFD9 1639 aa31.06■■■□□ 2.56
TCTA-204ENST00000488385 CLASP1Q7Z460 1538 aa31.04■■■□□ 2.56
TCTA-204ENST00000488385 ARHGEF11O15085 1522 aa31.03■■■□□ 2.56
TCTA-204ENST00000488385 IGF1RP08069 1367 aa30.94■■■□□ 2.54
TCTA-204ENST00000488385 CEP170Q5SW79 1584 aa30.93■■■□□ 2.54
TCTA-204ENST00000488385 CUL7Q14999 1698 aa30.9■■■□□ 2.54
TCTA-204ENST00000488385 NUP160Q12769 1436 aa30.9■■■□□ 2.54
TCTA-204ENST00000488385 RUSC2Q8N2Y8 1516 aa30.83■■■□□ 2.53
TCTA-204ENST00000488385 CARMIL1Q5VZK9 1371 aa30.79■■■□□ 2.52
TCTA-204ENST00000488385 ARAP1Q96P48 1450 aa30.78■■■□□ 2.52
TCTA-204ENST00000488385 CYB5RLQ6IPT4 315 aa30.77■■■□□ 2.52
TCTA-204ENST00000488385 SHROOM2Q13796 1616 aa30.68■■■□□ 2.5
TCTA-204ENST00000488385 ERCC6L2Q5T890 1561 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms