RNA–Protein interactions for RNA: ENST00000488339.1

PRPSAP1-208, Transcript of phosphoribosyl pyrophosphate synthetase associated protein 1, humanhuman

TSL 2

Gene PRPSAP1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPSAP1-208ENST00000488339 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
PRPSAP1-208ENST00000488339 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
PRPSAP1-208ENST00000488339 ABCC9O60706 1549 aa21.28■■□□□ 1
PRPSAP1-208ENST00000488339 DCAF8L2P0C7V8 631 aa20.46■□□□□ 0.87
PRPSAP1-208ENST00000488339 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
PRPSAP1-208ENST00000488339 NACADO15069 1562 aa20.34■□□□□ 0.85
PRPSAP1-208ENST00000488339 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
PRPSAP1-208ENST00000488339 MYO15BQ96JP2 1530 aa20.14■□□□□ 0.81
PRPSAP1-208ENST00000488339 DCAF1Q9Y4B6 1507 aa20.06■□□□□ 0.8
PRPSAP1-208ENST00000488339 UNC13AQ9UPW8 1703 aa19.94■□□□□ 0.78
PRPSAP1-208ENST00000488339 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
PRPSAP1-208ENST00000488339 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
PRPSAP1-208ENST00000488339 BICRAQ9NZM4 1560 aa19.76■□□□□ 0.75
PRPSAP1-208ENST00000488339 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
PRPSAP1-208ENST00000488339 DNAJC5BQ9UF47 199 aa19.51■□□□□ 0.71
PRPSAP1-208ENST00000488339 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.68
PRPSAP1-208ENST00000488339 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
PRPSAP1-208ENST00000488339 CECR2Q9BXF3 1484 aa19.1■□□□□ 0.65
PRPSAP1-208ENST00000488339 SMARCA4P51532 1647 aa18.89■□□□□ 0.62
PRPSAP1-208ENST00000488339 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
PRPSAP1-208ENST00000488339 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
PRPSAP1-208ENST00000488339 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
PRPSAP1-208ENST00000488339 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
PRPSAP1-208ENST00000488339 NCAPD3P42695 1498 aa18.75■□□□□ 0.59
PRPSAP1-208ENST00000488339 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
PRPSAP1-208ENST00000488339 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
PRPSAP1-208ENST00000488339 PEG3Q9GZU2 1588 aa18.65■□□□□ 0.58
PRPSAP1-208ENST00000488339 WIZO95785 1651 aa18.58■□□□□ 0.57
PRPSAP1-208ENST00000488339 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
PRPSAP1-208ENST00000488339 NESP48681 1621 aa18.38■□□□□ 0.53
PRPSAP1-208ENST00000488339 ERCC6Q03468 1493 aa18.37■□□□□ 0.53
PRPSAP1-208ENST00000488339 TOP2AP11388 1531 aaKnown RBP18.35■□□□□ 0.53
PRPSAP1-208ENST00000488339 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
PRPSAP1-208ENST00000488339 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
PRPSAP1-208ENST00000488339 PDS5BQ9NTI5 1447 aa18.19■□□□□ 0.5
PRPSAP1-208ENST00000488339 KIF21AQ7Z4S6 1674 aa18.17■□□□□ 0.5
PRPSAP1-208ENST00000488339 CCDC88BA6NC98 1476 aa18.13■□□□□ 0.49
PRPSAP1-208ENST00000488339 CUX2O14529 1486 aa18.12■□□□□ 0.49
PRPSAP1-208ENST00000488339 CFTRP13569 1480 aa18.1■□□□□ 0.49
PRPSAP1-208ENST00000488339 SUPT5HO00267 1087 aaKnown RBP18.1■□□□□ 0.49
PRPSAP1-208ENST00000488339 THOC2Q8NI27 1593 aaKnown RBP18.09■□□□□ 0.49
PRPSAP1-208ENST00000488339 FANCD2Q9BXW9 1451 aa18.05■□□□□ 0.48
PRPSAP1-208ENST00000488339 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
PRPSAP1-208ENST00000488339 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
PRPSAP1-208ENST00000488339 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
PRPSAP1-208ENST00000488339 WDR62O43379 1518 aa17.94■□□□□ 0.46
PRPSAP1-208ENST00000488339 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
PRPSAP1-208ENST00000488339 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
PRPSAP1-208ENST00000488339 DNMBPQ6XZF7 1577 aa17.72■□□□□ 0.43
PRPSAP1-208ENST00000488339 ABCC8Q09428 1581 aa17.71■□□□□ 0.43
PRPSAP1-208ENST00000488339 IFT140Q96RY7 1462 aa17.64■□□□□ 0.41
PRPSAP1-208ENST00000488339 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
PRPSAP1-208ENST00000488339 POLA1P09884 1462 aaPredicted RBP17.6■□□□□ 0.41
PRPSAP1-208ENST00000488339 CUX1P39880 1505 aa17.6■□□□□ 0.41
PRPSAP1-208ENST00000488339 ZNF608Q9ULD9 1512 aaPredicted RBP17.59■□□□□ 0.41
PRPSAP1-208ENST00000488339 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
PRPSAP1-208ENST00000488339 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
PRPSAP1-208ENST00000488339 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
PRPSAP1-208ENST00000488339 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
PRPSAP1-208ENST00000488339 SOGA1O94964 1423 aa17.53■□□□□ 0.4
PRPSAP1-208ENST00000488339 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.398e-11■■■■■ 26.9
PRPSAP1-208ENST00000488339 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
PRPSAP1-208ENST00000488339 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
PRPSAP1-208ENST00000488339 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
PRPSAP1-208ENST00000488339 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
PRPSAP1-208ENST00000488339 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
PRPSAP1-208ENST00000488339 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
PRPSAP1-208ENST00000488339 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
PRPSAP1-208ENST00000488339 ABCA10Q8WWZ4 1543 aa17.36■□□□□ 0.37
PRPSAP1-208ENST00000488339 FBLN2P98095 1184 aa17.35■□□□□ 0.37
PRPSAP1-208ENST00000488339 SNAPC4Q5SXM2 1469 aa17.34■□□□□ 0.37
PRPSAP1-208ENST00000488339 GAPVD1Q14C86 1478 aa17.33■□□□□ 0.37
PRPSAP1-208ENST00000488339 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
PRPSAP1-208ENST00000488339 CHD1O14646 1710 aa17.32■□□□□ 0.36
PRPSAP1-208ENST00000488339 PBRM1Q86U86 1689 aa17.32■□□□□ 0.36
PRPSAP1-208ENST00000488339 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
PRPSAP1-208ENST00000488339 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.36
PRPSAP1-208ENST00000488339 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
PRPSAP1-208ENST00000488339 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
PRPSAP1-208ENST00000488339 ADAMTS12P58397 1594 aa17.16■□□□□ 0.34
PRPSAP1-208ENST00000488339 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
PRPSAP1-208ENST00000488339 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
PRPSAP1-208ENST00000488339 RIMBP3CA6NJZ7 1639 aa17.12■□□□□ 0.33
PRPSAP1-208ENST00000488339 RIMBP3BA6NNM3 1639 aa17.12■□□□□ 0.33
PRPSAP1-208ENST00000488339 RIMBP3Q9UFD9 1639 aa17.12■□□□□ 0.33
PRPSAP1-208ENST00000488339 KIF27Q86VH2 1401 aa17.12■□□□□ 0.33
PRPSAP1-208ENST00000488339 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
PRPSAP1-208ENST00000488339 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
PRPSAP1-208ENST00000488339 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
PRPSAP1-208ENST00000488339 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
PRPSAP1-208ENST00000488339 CEP170Q5SW79 1584 aa17.03■□□□□ 0.32
PRPSAP1-208ENST00000488339 IGF1RP08069 1367 aa17.02■□□□□ 0.31
PRPSAP1-208ENST00000488339 CUL7Q14999 1698 aa17.01■□□□□ 0.31
PRPSAP1-208ENST00000488339 NUP160Q12769 1436 aa17■□□□□ 0.31
PRPSAP1-208ENST00000488339 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
PRPSAP1-208ENST00000488339 ARAP1Q96P48 1450 aa16.96■□□□□ 0.31
PRPSAP1-208ENST00000488339 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.3
PRPSAP1-208ENST00000488339 CARMIL1Q5VZK9 1371 aa16.94■□□□□ 0.3
PRPSAP1-208ENST00000488339 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
PRPSAP1-208ENST00000488339 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms