RNA–Protein interactions for RNA: ENST00000488324.1

PPP1R18-204, Transcript of protein phosphatase 1 regulatory subunit 18, humanhuman

TSL 3

Gene PPP1R18, Length 1,328 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R18-204ENST00000488324 NISCHQ9Y2I1 1504 aa35.65■■■■□ 3.3
PPP1R18-204ENST00000488324 ABCC9O60706 1549 aa32.05■■■□□ 2.72
PPP1R18-204ENST00000488324 CCDC180Q9P1Z9 1646 aa31.96■■■□□ 2.71
PPP1R18-204ENST00000488324 RB1CC1Q8TDY2 1594 aa30.43■■■□□ 2.46
PPP1R18-204ENST00000488324 DNAJC5BQ9UF47 199 aa30.34■■■□□ 2.45
PPP1R18-204ENST00000488324 NACADO15069 1562 aa30.24■■■□□ 2.43
PPP1R18-204ENST00000488324 DCAF8L2P0C7V8 631 aa30.03■■■□□ 2.4
PPP1R18-204ENST00000488324 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
PPP1R18-204ENST00000488324 PABPN1Q86U42 306 aaKnown RBP eCLIP29.88■■■□□ 2.37
PPP1R18-204ENST00000488324 MYO15BQ96JP2 1530 aa29.83■■■□□ 2.37
PPP1R18-204ENST00000488324 BICRAQ9NZM4 1560 aa29.71■■■□□ 2.35
PPP1R18-204ENST00000488324 ZCCHC6Q5VYS8 1495 aaKnown RBP29.5■■■□□ 2.31
PPP1R18-204ENST00000488324 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
PPP1R18-204ENST00000488324 SCRIBQ14160 1630 aa29.11■■■□□ 2.25
PPP1R18-204ENST00000488324 SHROOM4Q9ULL8 1493 aa29.11■■■□□ 2.25
PPP1R18-204ENST00000488324 CC2D2AQ9P2K1 1620 aa28.98■■■□□ 2.23
PPP1R18-204ENST00000488324 EIF4G1Q04637 1599 aaKnown RBP28.88■■■□□ 2.21
PPP1R18-204ENST00000488324 CECR2Q9BXF3 1484 aa28.86■■■□□ 2.21
PPP1R18-204ENST00000488324 NCAPD3P42695 1498 aa27.97■■■□□ 2.07
PPP1R18-204ENST00000488324 ATAD2BQ9ULI0 1458 aa27.87■■■□□ 2.05
PPP1R18-204ENST00000488324 DNAJC5Q9H3Z4 198 aa27.8■■■□□ 2.04
PPP1R18-204ENST00000488324 SMARCA4P51532 1647 aa27.8■■■□□ 2.04
PPP1R18-204ENST00000488324 SMARCA2P51531 1590 aa27.7■■■□□ 2.02
PPP1R18-204ENST00000488324 HMGXB3Q12766 1538 aa27.69■■■□□ 2.02
PPP1R18-204ENST00000488324 CUX2O14529 1486 aa27.61■■■□□ 2.01
PPP1R18-204ENST00000488324 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
PPP1R18-204ENST00000488324 NESP48681 1621 aa27.58■■■□□ 2.01
PPP1R18-204ENST00000488324 PEG3Q9GZU2 1588 aa27.57■■■□□ 2
PPP1R18-204ENST00000488324 ERCC6Q03468 1493 aa27.57■■■□□ 2
PPP1R18-204ENST00000488324 BAZ1BQ9UIG0 1483 aaKnown RBP27.51■■□□□ 1.99
PPP1R18-204ENST00000488324 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
PPP1R18-204ENST00000488324 LAMC3Q9Y6N6 1575 aa27.29■■□□□ 1.96
PPP1R18-204ENST00000488324 THOC2Q8NI27 1593 aaKnown RBP27.27■■□□□ 1.96
PPP1R18-204ENST00000488324 KIF21AQ7Z4S6 1674 aa27.2■■□□□ 1.94
PPP1R18-204ENST00000488324 WIZO95785 1651 aa27.17■■□□□ 1.94
PPP1R18-204ENST00000488324 PDS5BQ9NTI5 1447 aa27.1■■□□□ 1.93
PPP1R18-204ENST00000488324 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
PPP1R18-204ENST00000488324 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
PPP1R18-204ENST00000488324 MRC2Q9UBG0 1479 aa26.88■■□□□ 1.89
PPP1R18-204ENST00000488324 WDR62O43379 1518 aa26.85■■□□□ 1.89
PPP1R18-204ENST00000488324 CFTRP13569 1480 aa26.78■■□□□ 1.88
PPP1R18-204ENST00000488324 FANCD2Q9BXW9 1451 aa26.75■■□□□ 1.87
PPP1R18-204ENST00000488324 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
PPP1R18-204ENST00000488324 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
PPP1R18-204ENST00000488324 URB2Q14146 1524 aaKnown RBP26.6■■□□□ 1.85
PPP1R18-204ENST00000488324 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
PPP1R18-204ENST00000488324 PRDM2Q13029 1718 aa26.48■■□□□ 1.83
PPP1R18-204ENST00000488324 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
PPP1R18-204ENST00000488324 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
PPP1R18-204ENST00000488324 ZNF608Q9ULD9 1512 aaPredicted RBP26.29■■□□□ 1.8
PPP1R18-204ENST00000488324 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
PPP1R18-204ENST00000488324 IFT140Q96RY7 1462 aa26.23■■□□□ 1.79
PPP1R18-204ENST00000488324 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
PPP1R18-204ENST00000488324 DNMBPQ6XZF7 1577 aa26.13■■□□□ 1.77
PPP1R18-204ENST00000488324 TARBP1Q13395 1621 aaKnown RBP26.09■■□□□ 1.77
PPP1R18-204ENST00000488324 EIF4G3O43432 1585 aaKnown RBP26.06■■□□□ 1.76
PPP1R18-204ENST00000488324 RIMBP3CA6NJZ7 1639 aa26.06■■□□□ 1.76
PPP1R18-204ENST00000488324 RIMBP3BA6NNM3 1639 aa26.06■■□□□ 1.76
PPP1R18-204ENST00000488324 RIMBP3Q9UFD9 1639 aa26.06■■□□□ 1.76
PPP1R18-204ENST00000488324 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.76
PPP1R18-204ENST00000488324 POLA1P09884 1462 aaPredicted RBP25.99■■□□□ 1.75
PPP1R18-204ENST00000488324 ARHGEF11O15085 1522 aa25.95■■□□□ 1.74
PPP1R18-204ENST00000488324 RAD54L2Q9Y4B4 1467 aa25.94■■□□□ 1.74
PPP1R18-204ENST00000488324 CHD1O14646 1710 aa25.93■■□□□ 1.74
PPP1R18-204ENST00000488324 SOGA1O94964 1423 aa25.86■■□□□ 1.73
PPP1R18-204ENST00000488324 TDRD9Q8NDG6 1382 aaKnown RBP25.85■■□□□ 1.73
PPP1R18-204ENST00000488324 CUX1P39880 1505 aa25.82■■□□□ 1.72
PPP1R18-204ENST00000488324 FGD5Q6ZNL6 1462 aa25.8■■□□□ 1.72
PPP1R18-204ENST00000488324 CYB5RLQ6IPT4 315 aa25.78■■□□□ 1.72
PPP1R18-204ENST00000488324 FBLN2P98095 1184 aa25.77■■□□□ 1.72
PPP1R18-204ENST00000488324 ARAP1Q96P48 1450 aa25.72■■□□□ 1.71
PPP1R18-204ENST00000488324 WDR97A6NE52 1622 aa25.7■■□□□ 1.7
PPP1R18-204ENST00000488324 SNAPC4Q5SXM2 1469 aa25.69■■□□□ 1.7
PPP1R18-204ENST00000488324 CLASP1Q7Z460 1538 aa25.64■■□□□ 1.7
PPP1R18-204ENST00000488324 GRIN2BQ13224 1484 aa25.61■■□□□ 1.69
PPP1R18-204ENST00000488324 MAGI1Q96QZ7 1491 aaPredicted RBP25.61■■□□□ 1.69
PPP1R18-204ENST00000488324 CHMP7Q8WUX9 453 aaPredicted RBP25.59■■□□□ 1.69
PPP1R18-204ENST00000488324 SUPT5HO00267 1087 aaKnown RBP25.58■■□□□ 1.69
PPP1R18-204ENST00000488324 SYNJ2O15056 1496 aa25.54■■□□□ 1.68
PPP1R18-204ENST00000488324 PBRM1Q86U86 1689 aa25.53■■□□□ 1.68
PPP1R18-204ENST00000488324 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
PPP1R18-204ENST00000488324 SYNJ1O43426 1573 aa25.52■■□□□ 1.68
PPP1R18-204ENST00000488324 ABCA10Q8WWZ4 1543 aa25.52■■□□□ 1.68
PPP1R18-204ENST00000488324 ABCA5Q8WWZ7 1642 aa25.5■■□□□ 1.67
PPP1R18-204ENST00000488324 TRHP20396 242 aaPredicted RBP25.42■■□□□ 1.66
PPP1R18-204ENST00000488324 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
PPP1R18-204ENST00000488324 TOP2BQ02880 1626 aa25.35■■□□□ 1.65
PPP1R18-204ENST00000488324 WRNQ14191 1432 aaPredicted RBP eCLIP25.35■■□□□ 1.65
PPP1R18-204ENST00000488324 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
PPP1R18-204ENST00000488324 GRIN2AQ12879 1464 aa25.29■■□□□ 1.64
PPP1R18-204ENST00000488324 ADAMTS12P58397 1594 aa25.27■■□□□ 1.64
PPP1R18-204ENST00000488324 CEP170Q5SW79 1584 aa25.26■■□□□ 1.63
PPP1R18-204ENST00000488324 NUP160Q12769 1436 aa25.25■■□□□ 1.63
PPP1R18-204ENST00000488324 FHAD1B1AJZ9 1412 aa25.19■■□□□ 1.62
PPP1R18-204ENST00000488324 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
PPP1R18-204ENST00000488324 SHROOM2Q13796 1616 aa25.17■■□□□ 1.62
PPP1R18-204ENST00000488324 JPH4Q96JJ6 628 aa25.01■■□□□ 1.59
PPP1R18-204ENST00000488324 PRG4Q92954 1404 aaPredicted RBP24.99■■□□□ 1.59
PPP1R18-204ENST00000488324 IGF1RP08069 1367 aa24.93■■□□□ 1.58
PPP1R18-204ENST00000488324 RUSC2Q8N2Y8 1516 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms