RNA–Protein interactions for RNA: ENST00000488216.5

RBM3-207, Transcript of RNA binding motif protein 3, humanhuman

TSL 3

Gene RBM3, Length 835 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-207ENST00000488216 NISCHQ9Y2I1 1504 aa40.02■■■■■ 4
RBM3-207ENST00000488216 ABCC9O60706 1549 aa36.88■■■■□ 3.49
RBM3-207ENST00000488216 CCDC180Q9P1Z9 1646 aa36.16■■■■□ 3.38
RBM3-207ENST00000488216 DNAJC5BQ9UF47 199 aa35.15■■■■□ 3.22
RBM3-207ENST00000488216 RB1CC1Q8TDY2 1594 aa34.76■■■■□ 3.16
RBM3-207ENST00000488216 NACADO15069 1562 aa34.35■■■■□ 3.09
RBM3-207ENST00000488216 PABPN1Q86U42 306 aaKnown RBP eCLIP34.24■■■■□ 3.07
RBM3-207ENST00000488216 DCAF8L2P0C7V8 631 aa34.14■■■■□ 3.06
RBM3-207ENST00000488216 UNC13AQ9UPW8 1703 aa33.93■■■■□ 3.02
RBM3-207ENST00000488216 BICRAQ9NZM4 1560 aa33.78■■■■□ 3
RBM3-207ENST00000488216 MYO15BQ96JP2 1530 aa33.63■■■□□ 2.97
RBM3-207ENST00000488216 CECR2Q9BXF3 1484 aa33.27■■■□□ 2.92
RBM3-207ENST00000488216 CC2D2AQ9P2K1 1620 aa33.24■■■□□ 2.91
RBM3-207ENST00000488216 SHROOM4Q9ULL8 1493 aa33.21■■■□□ 2.91
RBM3-207ENST00000488216 ZCCHC6Q5VYS8 1495 aaKnown RBP33.05■■■□□ 2.88
RBM3-207ENST00000488216 EIF4G1Q04637 1599 aaKnown RBP33.01■■■□□ 2.88
RBM3-207ENST00000488216 SCRIBQ14160 1630 aa33■■■□□ 2.87
RBM3-207ENST00000488216 DCAF1Q9Y4B6 1507 aa32.97■■■□□ 2.87
RBM3-207ENST00000488216 DNAJC5Q9H3Z4 198 aa32.71■■■□□ 2.83
RBM3-207ENST00000488216 CUX2O14529 1486 aa31.99■■■□□ 2.71
RBM3-207ENST00000488216 ERCC6Q03468 1493 aa31.89■■■□□ 2.7
RBM3-207ENST00000488216 NCAPD3P42695 1498 aa31.72■■■□□ 2.67
RBM3-207ENST00000488216 ATAD2BQ9ULI0 1458 aa31.56■■■□□ 2.64
RBM3-207ENST00000488216 NESP48681 1621 aa31.49■■■□□ 2.63
RBM3-207ENST00000488216 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
RBM3-207ENST00000488216 SMARCA2P51531 1590 aa31.43■■■□□ 2.62
RBM3-207ENST00000488216 SMARCA4P51532 1647 aa31.37■■■□□ 2.61
RBM3-207ENST00000488216 THOC2Q8NI27 1593 aaKnown RBP31.27■■■□□ 2.6
RBM3-207ENST00000488216 BAZ1BQ9UIG0 1483 aaKnown RBP31.24■■■□□ 2.59
RBM3-207ENST00000488216 BAZ1AQ9NRL2 1556 aaPredicted RBP31.11■■■□□ 2.57
RBM3-207ENST00000488216 LAMC3Q9Y6N6 1575 aa31.11■■■□□ 2.57
RBM3-207ENST00000488216 TRIM41Q8WV44 630 aa31.09■■■□□ 2.57
RBM3-207ENST00000488216 KIF21AQ7Z4S6 1674 aa31.03■■■□□ 2.56
RBM3-207ENST00000488216 PEG3Q9GZU2 1588 aa31.02■■■□□ 2.56
RBM3-207ENST00000488216 PDS5BQ9NTI5 1447 aa30.98■■■□□ 2.55
RBM3-207ENST00000488216 MROH2BQ7Z745 1585 aa30.86■■■□□ 2.53
RBM3-207ENST00000488216 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.52
RBM3-207ENST00000488216 CADPSQ9ULU8 1353 aa30.75■■■□□ 2.51
RBM3-207ENST00000488216 WDR62O43379 1518 aa30.69■■■□□ 2.5
RBM3-207ENST00000488216 CEP164Q9UPV0 1460 aa30.51■■■□□ 2.48
RBM3-207ENST00000488216 WIZO95785 1651 aa30.45■■■□□ 2.46
RBM3-207ENST00000488216 OSCARQ8IYS5 282 aa30.43■■■□□ 2.46
RBM3-207ENST00000488216 FANCD2Q9BXW9 1451 aa30.43■■■□□ 2.46
RBM3-207ENST00000488216 CFTRP13569 1480 aa30.25■■■□□ 2.43
RBM3-207ENST00000488216 URB2Q14146 1524 aaKnown RBP30.22■■■□□ 2.43
RBM3-207ENST00000488216 RIMBP3CA6NJZ7 1639 aa30.12■■■□□ 2.41
RBM3-207ENST00000488216 RIMBP3BA6NNM3 1639 aa30.12■■■□□ 2.41
RBM3-207ENST00000488216 RIMBP3Q9UFD9 1639 aa30.12■■■□□ 2.41
RBM3-207ENST00000488216 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.4
RBM3-207ENST00000488216 RSF1Q96T23 1441 aaPredicted RBP29.97■■■□□ 2.39
RBM3-207ENST00000488216 ARHGEF11O15085 1522 aa29.97■■■□□ 2.39
RBM3-207ENST00000488216 ZNF608Q9ULD9 1512 aaPredicted RBP29.96■■■□□ 2.39
RBM3-207ENST00000488216 IFT140Q96RY7 1462 aa29.92■■■□□ 2.38
RBM3-207ENST00000488216 PRDM2Q13029 1718 aa29.85■■■□□ 2.37
RBM3-207ENST00000488216 CYB5RLQ6IPT4 315 aa29.8■■■□□ 2.36
RBM3-207ENST00000488216 TOPBP1Q92547 1522 aa29.77■■■□□ 2.36
RBM3-207ENST00000488216 EIF4G3O43432 1585 aaKnown RBP29.75■■■□□ 2.35
RBM3-207ENST00000488216 TRHP20396 242 aaPredicted RBP29.7■■■□□ 2.35
RBM3-207ENST00000488216 CCDC88BA6NC98 1476 aa29.69■■■□□ 2.34
RBM3-207ENST00000488216 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
RBM3-207ENST00000488216 CHD1O14646 1710 aa29.63■■■□□ 2.33
RBM3-207ENST00000488216 ABCC8Q09428 1581 aa29.61■■■□□ 2.33
RBM3-207ENST00000488216 AQRO60306 1485 aaKnown RBP eCLIP29.61■■■□□ 2.332e-11■■■■■ 28.6
RBM3-207ENST00000488216 DNMBPQ6XZF7 1577 aa29.6■■■□□ 2.33
RBM3-207ENST00000488216 FBLN2P98095 1184 aa29.57■■■□□ 2.32
RBM3-207ENST00000488216 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
RBM3-207ENST00000488216 POLA1P09884 1462 aaPredicted RBP29.43■■■□□ 2.3
RBM3-207ENST00000488216 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
RBM3-207ENST00000488216 TDRD9Q8NDG6 1382 aaKnown RBP29.34■■■□□ 2.29
RBM3-207ENST00000488216 AEBP2Q6ZN18 517 aaPredicted RBP29.3■■■□□ 2.28
RBM3-207ENST00000488216 SNAPC4Q5SXM2 1469 aa29.29■■■□□ 2.28
RBM3-207ENST00000488216 CLASP1Q7Z460 1538 aa29.29■■■□□ 2.28
RBM3-207ENST00000488216 SOGA1O94964 1423 aa29.28■■■□□ 2.28
RBM3-207ENST00000488216 CHMP7Q8WUX9 453 aaPredicted RBP29.22■■■□□ 2.27
RBM3-207ENST00000488216 SYNJ1O43426 1573 aa29.21■■■□□ 2.27
RBM3-207ENST00000488216 FGD5Q6ZNL6 1462 aa29.17■■■□□ 2.26
RBM3-207ENST00000488216 WDR97A6NE52 1622 aa29.15■■■□□ 2.26
RBM3-207ENST00000488216 MAGI1Q96QZ7 1491 aaPredicted RBP29.15■■■□□ 2.26
RBM3-207ENST00000488216 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
RBM3-207ENST00000488216 SYNJ2O15056 1496 aa29.08■■■□□ 2.25
RBM3-207ENST00000488216 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
RBM3-207ENST00000488216 CUX1P39880 1505 aa29.03■■■□□ 2.24
RBM3-207ENST00000488216 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
RBM3-207ENST00000488216 ERCC6L2Q5T890 1561 aa28.82■■■□□ 2.2
RBM3-207ENST00000488216 ABCA5Q8WWZ7 1642 aa28.79■■■□□ 2.2
RBM3-207ENST00000488216 ABCA10Q8WWZ4 1543 aa28.77■■■□□ 2.2
RBM3-207ENST00000488216 GRIN2AQ12879 1464 aa28.72■■■□□ 2.19
RBM3-207ENST00000488216 CEP170Q5SW79 1584 aa28.7■■■□□ 2.18
RBM3-207ENST00000488216 NUP160Q12769 1436 aa28.64■■■□□ 2.18
RBM3-207ENST00000488216 ADAMTS12P58397 1594 aa28.63■■■□□ 2.17
RBM3-207ENST00000488216 SHROOM2Q13796 1616 aa28.57■■■□□ 2.16
RBM3-207ENST00000488216 WRNQ14191 1432 aaPredicted RBP eCLIP28.53■■■□□ 2.16
RBM3-207ENST00000488216 KIF13AQ9H1H9 1805 aa28.53■■■□□ 2.16
RBM3-207ENST00000488216 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
RBM3-207ENST00000488216 PRG4Q92954 1404 aaPredicted RBP28.44■■■□□ 2.14
RBM3-207ENST00000488216 ERICH3Q5RHP9 1530 aa28.38■■■□□ 2.13
RBM3-207ENST00000488216 FAM69CQ0P6D2 419 aa28.38■■■□□ 2.13
RBM3-207ENST00000488216 TOP2BQ02880 1626 aa28.36■■■□□ 2.13
RBM3-207ENST00000488216 BIVM-ERCC5R4GMW8 1640 aa28.36■■■□□ 2.13
RBM3-207ENST00000488216 JPH4Q96JJ6 628 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms