RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 NISCHQ9Y2I1 1504 aa34.44■■■■□ 3.1
PFKFB3-213ENST00000487989 CCDC180Q9P1Z9 1646 aa30.61■■■□□ 2.49
PFKFB3-213ENST00000487989 ABCC9O60706 1549 aa30.12■■■□□ 2.41
PFKFB3-213ENST00000487989 DCAF8L2P0C7V8 631 aa28.93■■■□□ 2.22
PFKFB3-213ENST00000487989 RB1CC1Q8TDY2 1594 aa28.89■■■□□ 2.22
PFKFB3-213ENST00000487989 NACADO15069 1562 aa28.83■■■□□ 2.21
PFKFB3-213ENST00000487989 ZCCHC6Q5VYS8 1495 aaKnown RBP28.65■■■□□ 2.18
PFKFB3-213ENST00000487989 MYO15BQ96JP2 1530 aa28.62■■■□□ 2.17
PFKFB3-213ENST00000487989 DCAF1Q9Y4B6 1507 aa28.46■■■□□ 2.15
PFKFB3-213ENST00000487989 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
PFKFB3-213ENST00000487989 PABPN1Q86U42 306 aaKnown RBP eCLIP28.17■■■□□ 2.1
PFKFB3-213ENST00000487989 BICRAQ9NZM4 1560 aa28.01■■■□□ 2.07
PFKFB3-213ENST00000487989 SCRIBQ14160 1630 aa27.97■■■□□ 2.07
PFKFB3-213ENST00000487989 DNAJC5BQ9UF47 199 aa27.75■■■□□ 2.03
PFKFB3-213ENST00000487989 SHROOM4Q9ULL8 1493 aa27.69■■■□□ 2.02
PFKFB3-213ENST00000487989 EIF4G1Q04637 1599 aaKnown RBP27.28■■□□□ 1.96
PFKFB3-213ENST00000487989 CC2D2AQ9P2K1 1620 aa27.2■■□□□ 1.95
PFKFB3-213ENST00000487989 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
PFKFB3-213ENST00000487989 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
PFKFB3-213ENST00000487989 BAZ1AQ9NRL2 1556 aaPredicted RBP26.69■■□□□ 1.86
PFKFB3-213ENST00000487989 NCAPD3P42695 1498 aa26.62■■□□□ 1.85
PFKFB3-213ENST00000487989 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
PFKFB3-213ENST00000487989 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
PFKFB3-213ENST00000487989 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
PFKFB3-213ENST00000487989 HMGXB3Q12766 1538 aa26.45■■□□□ 1.83
PFKFB3-213ENST00000487989 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.82
PFKFB3-213ENST00000487989 BAZ1BQ9UIG0 1483 aaKnown RBP26.41■■□□□ 1.82
PFKFB3-213ENST00000487989 WIZO95785 1651 aa26.25■■□□□ 1.79
PFKFB3-213ENST00000487989 RSF1Q96T23 1441 aaPredicted RBP26.22■■□□□ 1.79
PFKFB3-213ENST00000487989 NESP48681 1621 aa26.03■■□□□ 1.76
PFKFB3-213ENST00000487989 ERCC6Q03468 1493 aa25.97■■□□□ 1.75
PFKFB3-213ENST00000487989 TOP2AP11388 1531 aaKnown RBP25.95■■□□□ 1.74
PFKFB3-213ENST00000487989 LAMC3Q9Y6N6 1575 aa25.91■■□□□ 1.74
PFKFB3-213ENST00000487989 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
PFKFB3-213ENST00000487989 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
PFKFB3-213ENST00000487989 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
PFKFB3-213ENST00000487989 CUX2O14529 1486 aa25.69■■□□□ 1.7
PFKFB3-213ENST00000487989 CFTRP13569 1480 aa25.67■■□□□ 1.7
PFKFB3-213ENST00000487989 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
PFKFB3-213ENST00000487989 THOC2Q8NI27 1593 aaKnown RBP25.6■■□□□ 1.69
PFKFB3-213ENST00000487989 SUPT5HO00267 1087 aaKnown RBP25.58■■□□□ 1.69
PFKFB3-213ENST00000487989 FANCD2Q9BXW9 1451 aa25.56■■□□□ 1.68
PFKFB3-213ENST00000487989 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
PFKFB3-213ENST00000487989 MRC2Q9UBG0 1479 aa25.5■■□□□ 1.67
PFKFB3-213ENST00000487989 WDR62O43379 1518 aa25.4■■□□□ 1.66
PFKFB3-213ENST00000487989 PRDM2Q13029 1718 aa25.39■■□□□ 1.65
PFKFB3-213ENST00000487989 URB2Q14146 1524 aaKnown RBP25.3■■□□□ 1.64
PFKFB3-213ENST00000487989 TOPBP1Q92547 1522 aa25.13■■□□□ 1.61
PFKFB3-213ENST00000487989 ABCC8Q09428 1581 aa25.13■■□□□ 1.61
PFKFB3-213ENST00000487989 DNMBPQ6XZF7 1577 aa25.08■■□□□ 1.61
PFKFB3-213ENST00000487989 DNAJC5Q9H3Z4 198 aa25.06■■□□□ 1.6
PFKFB3-213ENST00000487989 IFT140Q96RY7 1462 aa25■■□□□ 1.59
PFKFB3-213ENST00000487989 POLA1P09884 1462 aaPredicted RBP24.91■■□□□ 1.58
PFKFB3-213ENST00000487989 CUX1P39880 1505 aa24.91■■□□□ 1.58
PFKFB3-213ENST00000487989 ZNF608Q9ULD9 1512 aaPredicted RBP24.9■■□□□ 1.58
PFKFB3-213ENST00000487989 SOGA1O94964 1423 aa24.85■■□□□ 1.57
PFKFB3-213ENST00000487989 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
PFKFB3-213ENST00000487989 TARBP1Q13395 1621 aaKnown RBP24.84■■□□□ 1.57
PFKFB3-213ENST00000487989 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.56
PFKFB3-213ENST00000487989 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.561e-9■■■■■ 38.7
PFKFB3-213ENST00000487989 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
PFKFB3-213ENST00000487989 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.55
PFKFB3-213ENST00000487989 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
PFKFB3-213ENST00000487989 OSCARQ8IYS5 282 aa24.68■■□□□ 1.54
PFKFB3-213ENST00000487989 TOP2BQ02880 1626 aa24.65■■□□□ 1.54
PFKFB3-213ENST00000487989 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
PFKFB3-213ENST00000487989 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.53
PFKFB3-213ENST00000487989 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
PFKFB3-213ENST00000487989 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
PFKFB3-213ENST00000487989 FBLN2P98095 1184 aa24.55■■□□□ 1.52
PFKFB3-213ENST00000487989 GRIN2BQ13224 1484 aa24.54■■□□□ 1.52
PFKFB3-213ENST00000487989 GAPVD1Q14C86 1478 aa24.53■■□□□ 1.52
PFKFB3-213ENST00000487989 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
PFKFB3-213ENST00000487989 ABCA5Q8WWZ7 1642 aa24.47■■□□□ 1.51
PFKFB3-213ENST00000487989 MAGI1Q96QZ7 1491 aaPredicted RBP24.47■■□□□ 1.51
PFKFB3-213ENST00000487989 CHD1O14646 1710 aa24.45■■□□□ 1.5
PFKFB3-213ENST00000487989 CHMP7Q8WUX9 453 aaPredicted RBP24.45■■□□□ 1.5
PFKFB3-213ENST00000487989 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
PFKFB3-213ENST00000487989 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
PFKFB3-213ENST00000487989 ERICH3Q5RHP9 1530 aa24.29■■□□□ 1.48
PFKFB3-213ENST00000487989 FHAD1B1AJZ9 1412 aa24.25■■□□□ 1.47
PFKFB3-213ENST00000487989 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
PFKFB3-213ENST00000487989 TRIM41Q8WV44 630 aa24.23■■□□□ 1.47
PFKFB3-213ENST00000487989 KIF27Q86VH2 1401 aa24.23■■□□□ 1.47
PFKFB3-213ENST00000487989 RIMBP3CA6NJZ7 1639 aa24.22■■□□□ 1.47
PFKFB3-213ENST00000487989 RIMBP3BA6NNM3 1639 aa24.22■■□□□ 1.47
PFKFB3-213ENST00000487989 RIMBP3Q9UFD9 1639 aa24.22■■□□□ 1.47
PFKFB3-213ENST00000487989 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
PFKFB3-213ENST00000487989 GRIN2AQ12879 1464 aa24.21■■□□□ 1.47
PFKFB3-213ENST00000487989 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.47
PFKFB3-213ENST00000487989 IGF1RP08069 1367 aa24.16■■□□□ 1.46
PFKFB3-213ENST00000487989 NUP160Q12769 1436 aa24.1■■□□□ 1.45
PFKFB3-213ENST00000487989 CEP170Q5SW79 1584 aa24.08■■□□□ 1.45
PFKFB3-213ENST00000487989 CYB5RLQ6IPT4 315 aa24.07■■□□□ 1.44
PFKFB3-213ENST00000487989 CUL7Q14999 1698 aa24.03■■□□□ 1.44
PFKFB3-213ENST00000487989 ARAP1Q96P48 1450 aa24.02■■□□□ 1.44
PFKFB3-213ENST00000487989 CARMIL1Q5VZK9 1371 aa24.01■■□□□ 1.43
PFKFB3-213ENST00000487989 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
PFKFB3-213ENST00000487989 JPH4Q96JJ6 628 aa23.92■■□□□ 1.42
PFKFB3-213ENST00000487989 SHROOM2Q13796 1616 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms