RNA–Protein interactions for RNA: ENST00000487940.1

RNF5-204, Transcript of ring finger protein 5, humanhuman

TSL 2

Gene RNF5, Length 357 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5-204ENST00000487940 NISCHQ9Y2I1 1504 aa39.41■■■■□ 3.9
RNF5-204ENST00000487940 CCDC180Q9P1Z9 1646 aa35.21■■■■□ 3.23
RNF5-204ENST00000487940 ABCC9O60706 1549 aa34.96■■■■□ 3.19
RNF5-204ENST00000487940 RB1CC1Q8TDY2 1594 aa33.38■■■□□ 2.93
RNF5-204ENST00000487940 NACADO15069 1562 aa33.23■■■□□ 2.91
RNF5-204ENST00000487940 DCAF8L2P0C7V8 631 aa33.12■■■□□ 2.89
RNF5-204ENST00000487940 MYO15BQ96JP2 1530 aa32.88■■■□□ 2.85
RNF5-204ENST00000487940 ZCCHC6Q5VYS8 1495 aaKnown RBP32.74■■■□□ 2.83
RNF5-204ENST00000487940 UNC13AQ9UPW8 1703 aa32.63■■■□□ 2.81
RNF5-204ENST00000487940 PABPN1Q86U42 306 aaKnown RBP eCLIP32.6■■■□□ 2.81
RNF5-204ENST00000487940 DNAJC5BQ9UF47 199 aa32.57■■■□□ 2.8
RNF5-204ENST00000487940 DCAF1Q9Y4B6 1507 aa32.56■■■□□ 2.8
RNF5-204ENST00000487940 BICRAQ9NZM4 1560 aa32.44■■■□□ 2.78
RNF5-204ENST00000487940 SCRIBQ14160 1630 aa32.12■■■□□ 2.73
RNF5-204ENST00000487940 SHROOM4Q9ULL8 1493 aa31.99■■■□□ 2.71
RNF5-204ENST00000487940 CC2D2AQ9P2K1 1620 aa31.6■■■□□ 2.65
RNF5-204ENST00000487940 EIF4G1Q04637 1599 aaKnown RBP31.6■■■□□ 2.65
RNF5-204ENST00000487940 CECR2Q9BXF3 1484 aa31.46■■■□□ 2.63
RNF5-204ENST00000487940 NCAPD3P42695 1498 aa30.7■■■□□ 2.5
RNF5-204ENST00000487940 SMARCA4P51532 1647 aa30.68■■■□□ 2.5
RNF5-204ENST00000487940 ATAD2BQ9ULI0 1458 aa30.65■■■□□ 2.5
RNF5-204ENST00000487940 BAZ1AQ9NRL2 1556 aaPredicted RBP30.56■■■□□ 2.48
RNF5-204ENST00000487940 SMARCA2P51531 1590 aa30.55■■■□□ 2.48
RNF5-204ENST00000487940 HMGXB3Q12766 1538 aa30.48■■■□□ 2.47
RNF5-204ENST00000487940 MROH2BQ7Z745 1585 aa30.39■■■□□ 2.46
RNF5-204ENST00000487940 PEG3Q9GZU2 1588 aa30.38■■■□□ 2.45
RNF5-204ENST00000487940 BAZ1BQ9UIG0 1483 aaKnown RBP30.34■■■□□ 2.45
RNF5-204ENST00000487940 ERCC6Q03468 1493 aa30.14■■■□□ 2.42
RNF5-204ENST00000487940 NESP48681 1621 aa30.13■■■□□ 2.41
RNF5-204ENST00000487940 WIZO95785 1651 aa30.02■■■□□ 2.4
RNF5-204ENST00000487940 CUX2O14529 1486 aa30■■■□□ 2.39
RNF5-204ENST00000487940 LAMC3Q9Y6N6 1575 aa29.94■■■□□ 2.38
RNF5-204ENST00000487940 RSF1Q96T23 1441 aaPredicted RBP29.86■■■□□ 2.37
RNF5-204ENST00000487940 CADPSQ9ULU8 1353 aa29.77■■■□□ 2.36
RNF5-204ENST00000487940 THOC2Q8NI27 1593 aaKnown RBP29.76■■■□□ 2.35
RNF5-204ENST00000487940 PDS5BQ9NTI5 1447 aa29.75■■■□□ 2.35
RNF5-204ENST00000487940 KIF21AQ7Z4S6 1674 aa29.72■■■□□ 2.35
RNF5-204ENST00000487940 DNAJC5Q9H3Z4 198 aa29.66■■■□□ 2.34
RNF5-204ENST00000487940 TOP2AP11388 1531 aaKnown RBP29.66■■■□□ 2.34
RNF5-204ENST00000487940 CFTRP13569 1480 aa29.5■■■□□ 2.31
RNF5-204ENST00000487940 MRC2Q9UBG0 1479 aa29.48■■■□□ 2.31
RNF5-204ENST00000487940 FANCD2Q9BXW9 1451 aa29.43■■■□□ 2.3
RNF5-204ENST00000487940 CEP164Q9UPV0 1460 aa29.42■■■□□ 2.3
RNF5-204ENST00000487940 WDR62O43379 1518 aa29.41■■■□□ 2.3
RNF5-204ENST00000487940 CCDC88BA6NC98 1476 aa29.33■■■□□ 2.29
RNF5-204ENST00000487940 PRDM2Q13029 1718 aa29.18■■■□□ 2.26
RNF5-204ENST00000487940 URB2Q14146 1524 aaKnown RBP29.18■■■□□ 2.26
RNF5-204ENST00000487940 TOPBP1Q92547 1522 aa28.91■■■□□ 2.22
RNF5-204ENST00000487940 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
RNF5-204ENST00000487940 IFT140Q96RY7 1462 aa28.83■■■□□ 2.21
RNF5-204ENST00000487940 DNMBPQ6XZF7 1577 aa28.82■■■□□ 2.2
RNF5-204ENST00000487940 ZNF608Q9ULD9 1512 aaPredicted RBP28.78■■■□□ 2.2
RNF5-204ENST00000487940 SUPT5HO00267 1087 aaKnown RBP28.74■■■□□ 2.19
RNF5-204ENST00000487940 OSCARQ8IYS5 282 aa28.67■■■□□ 2.18
RNF5-204ENST00000487940 POLA1P09884 1462 aaPredicted RBP28.64■■■□□ 2.17
RNF5-204ENST00000487940 TARBP1Q13395 1621 aaKnown RBP28.63■■■□□ 2.17
RNF5-204ENST00000487940 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
RNF5-204ENST00000487940 AQRO60306 1485 aaKnown RBP eCLIP28.55■■■□□ 2.163e-8■■■■■ 45
RNF5-204ENST00000487940 RAD54L2Q9Y4B4 1467 aa28.53■■■□□ 2.16
RNF5-204ENST00000487940 CUX1P39880 1505 aa28.53■■■□□ 2.16
RNF5-204ENST00000487940 SOGA1O94964 1423 aa28.51■■■□□ 2.15
RNF5-204ENST00000487940 FGD5Q6ZNL6 1462 aa28.49■■■□□ 2.15
RNF5-204ENST00000487940 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
RNF5-204ENST00000487940 TDRD9Q8NDG6 1382 aaKnown RBP28.42■■■□□ 2.14
RNF5-204ENST00000487940 WDR97A6NE52 1622 aa28.34■■■□□ 2.13
RNF5-204ENST00000487940 CHD1O14646 1710 aa28.33■■■□□ 2.13
RNF5-204ENST00000487940 FBLN2P98095 1184 aa28.28■■■□□ 2.12
RNF5-204ENST00000487940 RIMBP3CA6NJZ7 1639 aa28.28■■■□□ 2.12
RNF5-204ENST00000487940 RIMBP3BA6NNM3 1639 aa28.28■■■□□ 2.12
RNF5-204ENST00000487940 RIMBP3Q9UFD9 1639 aa28.28■■■□□ 2.12
RNF5-204ENST00000487940 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
RNF5-204ENST00000487940 ARHGEF11O15085 1522 aa28.23■■■□□ 2.11
RNF5-204ENST00000487940 GRIN2BQ13224 1484 aa28.22■■■□□ 2.11
RNF5-204ENST00000487940 ABCA10Q8WWZ4 1543 aa28.19■■■□□ 2.1
RNF5-204ENST00000487940 MAGI1Q96QZ7 1491 aaPredicted RBP28.19■■■□□ 2.1
RNF5-204ENST00000487940 GAPVD1Q14C86 1478 aa28.16■■■□□ 2.1
RNF5-204ENST00000487940 WRNQ14191 1432 aaPredicted RBP eCLIP28.15■■■□□ 2.1
RNF5-204ENST00000487940 TOP2BQ02880 1626 aa28.13■■■□□ 2.09
RNF5-204ENST00000487940 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
RNF5-204ENST00000487940 ABCA5Q8WWZ7 1642 aa28.12■■■□□ 2.09
RNF5-204ENST00000487940 CHMP7Q8WUX9 453 aaPredicted RBP28.12■■■□□ 2.09
RNF5-204ENST00000487940 PBRM1Q86U86 1689 aa28.12■■■□□ 2.09
RNF5-204ENST00000487940 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
RNF5-204ENST00000487940 SYNJ2O15056 1496 aa28.09■■■□□ 2.09
RNF5-204ENST00000487940 CLASP1Q7Z460 1538 aa28.04■■■□□ 2.08
RNF5-204ENST00000487940 CYB5RLQ6IPT4 315 aa28■■■□□ 2.07
RNF5-204ENST00000487940 ARAP1Q96P48 1450 aa27.98■■■□□ 2.07
RNF5-204ENST00000487940 ADAMTS12P58397 1594 aa27.89■■■□□ 2.05
RNF5-204ENST00000487940 GRIN2AQ12879 1464 aa27.86■■■□□ 2.05
RNF5-204ENST00000487940 ERICH3Q5RHP9 1530 aa27.83■■■□□ 2.05
RNF5-204ENST00000487940 FHAD1B1AJZ9 1412 aa27.82■■■□□ 2.04
RNF5-204ENST00000487940 NUP160Q12769 1436 aa27.77■■■□□ 2.04
RNF5-204ENST00000487940 CEP170Q5SW79 1584 aa27.76■■■□□ 2.03
RNF5-204ENST00000487940 ERCC6L2Q5T890 1561 aa27.64■■■□□ 2.01
RNF5-204ENST00000487940 SHROOM2Q13796 1616 aa27.6■■■□□ 2.01
RNF5-204ENST00000487940 KIF27Q86VH2 1401 aa27.58■■■□□ 2.01
RNF5-204ENST00000487940 TRHP20396 242 aaPredicted RBP27.57■■■□□ 2
RNF5-204ENST00000487940 IGF1RP08069 1367 aa27.57■■■□□ 2
RNF5-204ENST00000487940 RUSC2Q8N2Y8 1516 aa27.48■■□□□ 1.99
RNF5-204ENST00000487940 JPH4Q96JJ6 628 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms