RNA–Protein interactions for RNA: ENST00000487406.2

FUBP3-205, Transcript of far upstream element binding protein 3, humanhuman

TSL 5

Gene FUBP3, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3-205ENST00000487406 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
FUBP3-205ENST00000487406 CCDC180Q9P1Z9 1646 aa30.18■■■□□ 2.42
FUBP3-205ENST00000487406 ABCC9O60706 1549 aa29.33■■■□□ 2.29
FUBP3-205ENST00000487406 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
FUBP3-205ENST00000487406 NACADO15069 1562 aa28.29■■■□□ 2.12
FUBP3-205ENST00000487406 ZCCHC6Q5VYS8 1495 aaKnown RBP28.21■■■□□ 2.11
FUBP3-205ENST00000487406 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
FUBP3-205ENST00000487406 DCAF1Q9Y4B6 1507 aa28.07■■■□□ 2.08
FUBP3-205ENST00000487406 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
FUBP3-205ENST00000487406 UNC13AQ9UPW8 1703 aa27.85■■■□□ 2.05
FUBP3-205ENST00000487406 BICRAQ9NZM4 1560 aa27.54■■■□□ 2
FUBP3-205ENST00000487406 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
FUBP3-205ENST00000487406 PABPN1Q86U42 306 aaKnown RBP eCLIP27.34■■□□□ 1.97
FUBP3-205ENST00000487406 SHROOM4Q9ULL8 1493 aa27.2■■□□□ 1.95
FUBP3-205ENST00000487406 DNAJC5BQ9UF47 199 aa26.95■■□□□ 1.9
FUBP3-205ENST00000487406 EIF4G1Q04637 1599 aaKnown RBP26.73■■□□□ 1.87
FUBP3-205ENST00000487406 CC2D2AQ9P2K1 1620 aa26.62■■□□□ 1.85
FUBP3-205ENST00000487406 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
FUBP3-205ENST00000487406 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
FUBP3-205ENST00000487406 BAZ1AQ9NRL2 1556 aaPredicted RBP26.21■■□□□ 1.79
FUBP3-205ENST00000487406 NCAPD3P42695 1498 aa26.1■■□□□ 1.77
FUBP3-205ENST00000487406 ATAD2BQ9ULI0 1458 aa26.09■■□□□ 1.77
FUBP3-205ENST00000487406 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
FUBP3-205ENST00000487406 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
FUBP3-205ENST00000487406 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
FUBP3-205ENST00000487406 HMGXB3Q12766 1538 aa25.99■■□□□ 1.75
FUBP3-205ENST00000487406 WIZO95785 1651 aa25.83■■□□□ 1.73
FUBP3-205ENST00000487406 BAZ1BQ9UIG0 1483 aaKnown RBP25.83■■□□□ 1.73
FUBP3-205ENST00000487406 RSF1Q96T23 1441 aaPredicted RBP25.76■■□□□ 1.71
FUBP3-205ENST00000487406 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
FUBP3-205ENST00000487406 NESP48681 1621 aa25.44■■□□□ 1.66
FUBP3-205ENST00000487406 LAMC3Q9Y6N6 1575 aa25.42■■□□□ 1.66
FUBP3-205ENST00000487406 CADPSQ9ULU8 1353 aa25.28■■□□□ 1.64
FUBP3-205ENST00000487406 KIF21AQ7Z4S6 1674 aa25.24■■□□□ 1.63
FUBP3-205ENST00000487406 ERCC6Q03468 1493 aa25.22■■□□□ 1.63
FUBP3-205ENST00000487406 CCDC88BA6NC98 1476 aa25.2■■□□□ 1.62
FUBP3-205ENST00000487406 CFTRP13569 1480 aa25.18■■□□□ 1.62
FUBP3-205ENST00000487406 PRDM2Q13029 1718 aa25.16■■□□□ 1.62
FUBP3-205ENST00000487406 PDS5BQ9NTI5 1447 aa25.15■■□□□ 1.62
FUBP3-205ENST00000487406 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.61
FUBP3-205ENST00000487406 CUX2O14529 1486 aa25.06■■□□□ 1.6
FUBP3-205ENST00000487406 FANCD2Q9BXW9 1451 aa24.98■■□□□ 1.59
FUBP3-205ENST00000487406 CEP164Q9UPV0 1460 aa24.95■■□□□ 1.58
FUBP3-205ENST00000487406 SUPT5HO00267 1087 aaKnown RBP24.94■■□□□ 1.58
FUBP3-205ENST00000487406 MRC2Q9UBG0 1479 aa24.93■■□□□ 1.58
FUBP3-205ENST00000487406 WDR62O43379 1518 aa24.91■■□□□ 1.58
FUBP3-205ENST00000487406 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
FUBP3-205ENST00000487406 TOPBP1Q92547 1522 aa24.63■■□□□ 1.53
FUBP3-205ENST00000487406 DNMBPQ6XZF7 1577 aa24.62■■□□□ 1.53
FUBP3-205ENST00000487406 ABCC8Q09428 1581 aa24.61■■□□□ 1.53
FUBP3-205ENST00000487406 CUX1P39880 1505 aa24.46■■□□□ 1.51
FUBP3-205ENST00000487406 IFT140Q96RY7 1462 aa24.44■■□□□ 1.5
FUBP3-205ENST00000487406 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
FUBP3-205ENST00000487406 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
FUBP3-205ENST00000487406 FGD5Q6ZNL6 1462 aa24.34■■□□□ 1.49
FUBP3-205ENST00000487406 ZNF608Q9ULD9 1512 aaPredicted RBP24.34■■□□□ 1.49
FUBP3-205ENST00000487406 BIVM-ERCC5R4GMW8 1640 aa24.33■■□□□ 1.49
FUBP3-205ENST00000487406 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
FUBP3-205ENST00000487406 WDR97A6NE52 1622 aa24.29■■□□□ 1.48
FUBP3-205ENST00000487406 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
FUBP3-205ENST00000487406 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
FUBP3-205ENST00000487406 SYNJ1O43426 1573 aa24.27■■□□□ 1.48
FUBP3-205ENST00000487406 SOGA1O94964 1423 aa24.26■■□□□ 1.47
FUBP3-205ENST00000487406 WRNQ14191 1432 aaPredicted RBP eCLIP24.24■■□□□ 1.47
FUBP3-205ENST00000487406 DNAJC5Q9H3Z4 198 aa24.23■■□□□ 1.47
FUBP3-205ENST00000487406 AQRO60306 1485 aaKnown RBP eCLIP24.17■■□□□ 1.461e-6■■■□□ 17
FUBP3-205ENST00000487406 ABCA10Q8WWZ4 1543 aa24.14■■□□□ 1.45
FUBP3-205ENST00000487406 TDRD9Q8NDG6 1382 aaKnown RBP24.1■■□□□ 1.45
FUBP3-205ENST00000487406 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
FUBP3-205ENST00000487406 PBRM1Q86U86 1689 aa24.08■■□□□ 1.44
FUBP3-205ENST00000487406 CHD1O14646 1710 aa24.04■■□□□ 1.44
FUBP3-205ENST00000487406 GRIN2BQ13224 1484 aa24■■□□□ 1.43
FUBP3-205ENST00000487406 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
FUBP3-205ENST00000487406 MAGI1Q96QZ7 1491 aaPredicted RBP23.96■■□□□ 1.43
FUBP3-205ENST00000487406 SNAPC4Q5SXM2 1469 aa23.95■■□□□ 1.42
FUBP3-205ENST00000487406 OSCARQ8IYS5 282 aa23.92■■□□□ 1.42
FUBP3-205ENST00000487406 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
FUBP3-205ENST00000487406 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
FUBP3-205ENST00000487406 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
FUBP3-205ENST00000487406 CLASP1Q7Z460 1538 aa23.75■■□□□ 1.39
FUBP3-205ENST00000487406 FBLN2P98095 1184 aa23.73■■□□□ 1.39
FUBP3-205ENST00000487406 CHMP7Q8WUX9 453 aaPredicted RBP23.72■■□□□ 1.39
FUBP3-205ENST00000487406 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
FUBP3-205ENST00000487406 KIF27Q86VH2 1401 aa23.72■■□□□ 1.39
FUBP3-205ENST00000487406 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
FUBP3-205ENST00000487406 RIMBP3CA6NJZ7 1639 aa23.68■■□□□ 1.38
FUBP3-205ENST00000487406 RIMBP3BA6NNM3 1639 aa23.68■■□□□ 1.38
FUBP3-205ENST00000487406 RIMBP3Q9UFD9 1639 aa23.68■■□□□ 1.38
FUBP3-205ENST00000487406 CUL7Q14999 1698 aa23.67■■□□□ 1.38
FUBP3-205ENST00000487406 IGF1RP08069 1367 aa23.65■■□□□ 1.38
FUBP3-205ENST00000487406 CEP170Q5SW79 1584 aa23.64■■□□□ 1.37
FUBP3-205ENST00000487406 ARHGEF11O15085 1522 aa23.64■■□□□ 1.37
FUBP3-205ENST00000487406 NUP160Q12769 1436 aa23.63■■□□□ 1.37
FUBP3-205ENST00000487406 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
FUBP3-205ENST00000487406 RUSC2Q8N2Y8 1516 aa23.57■■□□□ 1.36
FUBP3-205ENST00000487406 SHROOM2Q13796 1616 aa23.54■■□□□ 1.36
FUBP3-205ENST00000487406 CARMIL1Q5VZK9 1371 aa23.48■■□□□ 1.35
FUBP3-205ENST00000487406 ARAP1Q96P48 1450 aa23.45■■□□□ 1.34
FUBP3-205ENST00000487406 ERCC6L2Q5T890 1561 aa23.4■■□□□ 1.34
FUBP3-205ENST00000487406 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms