RNA–Protein interactions for RNA: ENST00000487378.1

TRMT2A-215, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

TSL 2

Gene TRMT2A, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-215ENST00000487378 NISCHQ9Y2I1 1504 aa37.08■■■■□ 3.53
TRMT2A-215ENST00000487378 CCDC180Q9P1Z9 1646 aa33.09■■■□□ 2.89
TRMT2A-215ENST00000487378 ABCC9O60706 1549 aa32.99■■■□□ 2.87
TRMT2A-215ENST00000487378 RB1CC1Q8TDY2 1594 aa31.47■■■□□ 2.63
TRMT2A-215ENST00000487378 NACADO15069 1562 aa31.34■■■□□ 2.61
TRMT2A-215ENST00000487378 DCAF8L2P0C7V8 631 aa31.18■■■□□ 2.58
TRMT2A-215ENST00000487378 MYO15BQ96JP2 1530 aa31.06■■■□□ 2.56
TRMT2A-215ENST00000487378 DNAJC5BQ9UF47 199 aa30.98■■■□□ 2.55
TRMT2A-215ENST00000487378 PABPN1Q86U42 306 aaKnown RBP eCLIP30.81■■■□□ 2.527e-7■■■■□ 25.6
TRMT2A-215ENST00000487378 ZCCHC6Q5VYS8 1495 aaKnown RBP30.74■■■□□ 2.51
TRMT2A-215ENST00000487378 DCAF1Q9Y4B6 1507 aa30.68■■■□□ 2.5
TRMT2A-215ENST00000487378 UNC13AQ9UPW8 1703 aa30.62■■■□□ 2.49
TRMT2A-215ENST00000487378 BICRAQ9NZM4 1560 aa30.59■■■□□ 2.49
TRMT2A-215ENST00000487378 SHROOM4Q9ULL8 1493 aa30.25■■■□□ 2.43
TRMT2A-215ENST00000487378 SCRIBQ14160 1630 aa30.11■■■□□ 2.41
TRMT2A-215ENST00000487378 EIF4G1Q04637 1599 aaKnown RBP29.8■■■□□ 2.36
TRMT2A-215ENST00000487378 CC2D2AQ9P2K1 1620 aa29.79■■■□□ 2.36
TRMT2A-215ENST00000487378 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
TRMT2A-215ENST00000487378 NCAPD3P42695 1498 aa29.03■■■□□ 2.24
TRMT2A-215ENST00000487378 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
TRMT2A-215ENST00000487378 SMARCA4P51532 1647 aa28.81■■■□□ 2.2
TRMT2A-215ENST00000487378 SMARCA2P51531 1590 aa28.77■■■□□ 2.2
TRMT2A-215ENST00000487378 BAZ1AQ9NRL2 1556 aaPredicted RBP28.73■■■□□ 2.19
TRMT2A-215ENST00000487378 HMGXB3Q12766 1538 aa28.72■■■□□ 2.19
TRMT2A-215ENST00000487378 PEG3Q9GZU2 1588 aa28.62■■■□□ 2.17
TRMT2A-215ENST00000487378 BAZ1BQ9UIG0 1483 aaKnown RBP28.56■■■□□ 2.16
TRMT2A-215ENST00000487378 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
TRMT2A-215ENST00000487378 ERCC6Q03468 1493 aa28.45■■■□□ 2.14
TRMT2A-215ENST00000487378 CUX2O14529 1486 aa28.43■■■□□ 2.14
TRMT2A-215ENST00000487378 NESP48681 1621 aa28.4■■■□□ 2.14
TRMT2A-215ENST00000487378 DNAJC5Q9H3Z4 198 aa28.35■■■□□ 2.13
TRMT2A-215ENST00000487378 LAMC3Q9Y6N6 1575 aa28.23■■■□□ 2.11
TRMT2A-215ENST00000487378 CADPSQ9ULU8 1353 aa28.13■■■□□ 2.09
TRMT2A-215ENST00000487378 WIZO95785 1651 aa28.12■■■□□ 2.09
TRMT2A-215ENST00000487378 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
TRMT2A-215ENST00000487378 RSF1Q96T23 1441 aaPredicted RBP28.08■■■□□ 2.09
TRMT2A-215ENST00000487378 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
TRMT2A-215ENST00000487378 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
TRMT2A-215ENST00000487378 TOP2AP11388 1531 aaKnown RBP27.83■■■□□ 2.05
TRMT2A-215ENST00000487378 CFTRP13569 1480 aa27.83■■■□□ 2.04
TRMT2A-215ENST00000487378 MRC2Q9UBG0 1479 aa27.82■■■□□ 2.04
TRMT2A-215ENST00000487378 WDR62O43379 1518 aa27.74■■■□□ 2.03
TRMT2A-215ENST00000487378 FANCD2Q9BXW9 1451 aa27.73■■■□□ 2.03
TRMT2A-215ENST00000487378 CEP164Q9UPV0 1460 aa27.71■■■□□ 2.03
TRMT2A-215ENST00000487378 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
TRMT2A-215ENST00000487378 URB2Q14146 1524 aaKnown RBP27.5■■□□□ 1.99
TRMT2A-215ENST00000487378 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
TRMT2A-215ENST00000487378 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
TRMT2A-215ENST00000487378 TOPBP1Q92547 1522 aa27.22■■□□□ 1.95
TRMT2A-215ENST00000487378 ABCC8Q09428 1581 aa27.22■■□□□ 1.95
TRMT2A-215ENST00000487378 IFT140Q96RY7 1462 aa27.21■■□□□ 1.95
TRMT2A-215ENST00000487378 ZNF608Q9ULD9 1512 aaPredicted RBP27.13■■□□□ 1.93
TRMT2A-215ENST00000487378 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
TRMT2A-215ENST00000487378 TRIM41Q8WV44 630 aa27■■□□□ 1.91
TRMT2A-215ENST00000487378 POLA1P09884 1462 aaPredicted RBP26.96■■□□□ 1.91
TRMT2A-215ENST00000487378 TARBP1Q13395 1621 aaKnown RBP26.95■■□□□ 1.91
TRMT2A-215ENST00000487378 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.94e-6■□□□□ 10.8
TRMT2A-215ENST00000487378 EIF4G3O43432 1585 aaKnown RBP26.89■■□□□ 1.9
TRMT2A-215ENST00000487378 SOGA1O94964 1423 aa26.87■■□□□ 1.89
TRMT2A-215ENST00000487378 SUPT5HO00267 1087 aaKnown RBP26.85■■□□□ 1.89
TRMT2A-215ENST00000487378 RAD54L2Q9Y4B4 1467 aa26.85■■□□□ 1.89
TRMT2A-215ENST00000487378 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
TRMT2A-215ENST00000487378 CUX1P39880 1505 aa26.8■■□□□ 1.88
TRMT2A-215ENST00000487378 FGD5Q6ZNL6 1462 aa26.78■■□□□ 1.88
TRMT2A-215ENST00000487378 WDR97A6NE52 1622 aa26.69■■□□□ 1.86
TRMT2A-215ENST00000487378 RIMBP3CA6NJZ7 1639 aa26.69■■□□□ 1.86
TRMT2A-215ENST00000487378 RIMBP3BA6NNM3 1639 aa26.69■■□□□ 1.86
TRMT2A-215ENST00000487378 RIMBP3Q9UFD9 1639 aa26.69■■□□□ 1.86
TRMT2A-215ENST00000487378 ARHGEF11O15085 1522 aa26.68■■□□□ 1.86
TRMT2A-215ENST00000487378 FBLN2P98095 1184 aa26.67■■□□□ 1.86
TRMT2A-215ENST00000487378 GRIN2BQ13224 1484 aa26.6■■□□□ 1.85
TRMT2A-215ENST00000487378 SNAPC4Q5SXM2 1469 aa26.6■■□□□ 1.85
TRMT2A-215ENST00000487378 CHD1O14646 1710 aa26.59■■□□□ 1.85
TRMT2A-215ENST00000487378 MAGI1Q96QZ7 1491 aaPredicted RBP26.58■■□□□ 1.85
TRMT2A-215ENST00000487378 CHMP7Q8WUX9 453 aaPredicted RBP26.56■■□□□ 1.84
TRMT2A-215ENST00000487378 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
TRMT2A-215ENST00000487378 CYB5RLQ6IPT4 315 aa26.53■■□□□ 1.84
TRMT2A-215ENST00000487378 GAPVD1Q14C86 1478 aa26.52■■□□□ 1.84
TRMT2A-215ENST00000487378 SYNJ2O15056 1496 aa26.49■■□□□ 1.83
TRMT2A-215ENST00000487378 WRNQ14191 1432 aaPredicted RBP eCLIP26.48■■□□□ 1.83
TRMT2A-215ENST00000487378 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
TRMT2A-215ENST00000487378 ARAP1Q96P48 1450 aa26.44■■□□□ 1.82
TRMT2A-215ENST00000487378 ABCA5Q8WWZ7 1642 aa26.4■■□□□ 1.82
TRMT2A-215ENST00000487378 SYNJ1O43426 1573 aa26.39■■□□□ 1.82
TRMT2A-215ENST00000487378 TOP2BQ02880 1626 aa26.39■■□□□ 1.81
TRMT2A-215ENST00000487378 BIVM-ERCC5R4GMW8 1640 aa26.35■■□□□ 1.81
TRMT2A-215ENST00000487378 PBRM1Q86U86 1689 aa26.32■■□□□ 1.8
TRMT2A-215ENST00000487378 GRIN2AQ12879 1464 aa26.24■■□□□ 1.79
TRMT2A-215ENST00000487378 FHAD1B1AJZ9 1412 aa26.22■■□□□ 1.79
TRMT2A-215ENST00000487378 NUP160Q12769 1436 aa26.21■■□□□ 1.79
TRMT2A-215ENST00000487378 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
TRMT2A-215ENST00000487378 ADAMTS12P58397 1594 aa26.17■■□□□ 1.78
TRMT2A-215ENST00000487378 TRHP20396 242 aaPredicted RBP26.12■■□□□ 1.77
TRMT2A-215ENST00000487378 CEP170Q5SW79 1584 aa26.09■■□□□ 1.77
TRMT2A-215ENST00000487378 ERCC6L2Q5T890 1561 aa26.01■■□□□ 1.75
TRMT2A-215ENST00000487378 SHROOM2Q13796 1616 aa25.99■■□□□ 1.75
TRMT2A-215ENST00000487378 IGF1RP08069 1367 aa25.99■■□□□ 1.75
TRMT2A-215ENST00000487378 JPH4Q96JJ6 628 aa25.97■■□□□ 1.75
TRMT2A-215ENST00000487378 KIF27Q86VH2 1401 aa25.93■■□□□ 1.74
TRMT2A-215ENST00000487378 PRG4Q92954 1404 aaPredicted RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms