RNA–Protein interactions for RNA: ENST00000487086.1

NSFL1C-208, Transcript of NSFL1 cofactor, humanhuman

TSL 2

Gene NSFL1C, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-208ENST00000487086 NISCHQ9Y2I1 1504 aa40.72■■■■■ 4.11
NSFL1C-208ENST00000487086 ABCC9O60706 1549 aa37■■■■□ 3.51
NSFL1C-208ENST00000487086 CCDC180Q9P1Z9 1646 aa36.65■■■■□ 3.46
NSFL1C-208ENST00000487086 RB1CC1Q8TDY2 1594 aa35.01■■■■□ 3.2
NSFL1C-208ENST00000487086 DNAJC5BQ9UF47 199 aa35.01■■■■□ 3.2
NSFL1C-208ENST00000487086 NACADO15069 1562 aa34.68■■■■□ 3.14
NSFL1C-208ENST00000487086 DCAF8L2P0C7V8 631 aa34.56■■■■□ 3.12
NSFL1C-208ENST00000487086 PABPN1Q86U42 306 aaKnown RBP eCLIP34.42■■■■□ 3.1
NSFL1C-208ENST00000487086 UNC13AQ9UPW8 1703 aa34.39■■■■□ 3.1
NSFL1C-208ENST00000487086 BICRAQ9NZM4 1560 aa34.09■■■■□ 3.05
NSFL1C-208ENST00000487086 MYO15BQ96JP2 1530 aa34.04■■■■□ 3.04
NSFL1C-208ENST00000487086 ZCCHC6Q5VYS8 1495 aaKnown RBP33.93■■■■□ 3.02
NSFL1C-208ENST00000487086 DCAF1Q9Y4B6 1507 aa33.68■■■□□ 2.98
NSFL1C-208ENST00000487086 SCRIBQ14160 1630 aa33.46■■■□□ 2.95
NSFL1C-208ENST00000487086 CC2D2AQ9P2K1 1620 aa33.41■■■□□ 2.94
NSFL1C-208ENST00000487086 SHROOM4Q9ULL8 1493 aa33.4■■■□□ 2.94
NSFL1C-208ENST00000487086 CECR2Q9BXF3 1484 aa33.31■■■□□ 2.92
NSFL1C-208ENST00000487086 EIF4G1Q04637 1599 aaKnown RBP33.23■■■□□ 2.91
NSFL1C-208ENST00000487086 DNAJC5Q9H3Z4 198 aa32.25■■■□□ 2.75
NSFL1C-208ENST00000487086 NCAPD3P42695 1498 aa32.03■■■□□ 2.72
NSFL1C-208ENST00000487086 ATAD2BQ9ULI0 1458 aa31.92■■■□□ 2.7
NSFL1C-208ENST00000487086 ERCC6Q03468 1493 aa31.9■■■□□ 2.7
NSFL1C-208ENST00000487086 CUX2O14529 1486 aa31.89■■■□□ 2.7
NSFL1C-208ENST00000487086 SMARCA4P51532 1647 aa31.85■■■□□ 2.69
NSFL1C-208ENST00000487086 SMARCA2P51531 1590 aa31.77■■■□□ 2.68
NSFL1C-208ENST00000487086 HMGXB3Q12766 1538 aa31.75■■■□□ 2.67
NSFL1C-208ENST00000487086 NESP48681 1621 aa31.73■■■□□ 2.67
NSFL1C-208ENST00000487086 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
NSFL1C-208ENST00000487086 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
NSFL1C-208ENST00000487086 PEG3Q9GZU2 1588 aa31.49■■■□□ 2.63
NSFL1C-208ENST00000487086 MROH2BQ7Z745 1585 aa31.43■■■□□ 2.62
NSFL1C-208ENST00000487086 THOC2Q8NI27 1593 aaKnown RBP31.43■■■□□ 2.62
NSFL1C-208ENST00000487086 LAMC3Q9Y6N6 1575 aa31.36■■■□□ 2.61
NSFL1C-208ENST00000487086 KIF21AQ7Z4S6 1674 aa31.34■■■□□ 2.61
NSFL1C-208ENST00000487086 PDS5BQ9NTI5 1447 aa31.15■■■□□ 2.58
NSFL1C-208ENST00000487086 WIZO95785 1651 aa31.08■■■□□ 2.57
NSFL1C-208ENST00000487086 CADPSQ9ULU8 1353 aa31.05■■■□□ 2.56
NSFL1C-208ENST00000487086 RSF1Q96T23 1441 aaPredicted RBP30.98■■■□□ 2.55
NSFL1C-208ENST00000487086 MRC2Q9UBG0 1479 aa30.95■■■□□ 2.54
NSFL1C-208ENST00000487086 WDR62O43379 1518 aa30.88■■■□□ 2.53
NSFL1C-208ENST00000487086 TRIM41Q8WV44 630 aa30.79■■■□□ 2.52
NSFL1C-208ENST00000487086 CEP164Q9UPV0 1460 aa30.76■■■□□ 2.52
NSFL1C-208ENST00000487086 FANCD2Q9BXW9 1451 aa30.72■■■□□ 2.51
NSFL1C-208ENST00000487086 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
NSFL1C-208ENST00000487086 CFTRP13569 1480 aa30.63■■■□□ 2.49
NSFL1C-208ENST00000487086 URB2Q14146 1524 aaKnown RBP30.52■■■□□ 2.48
NSFL1C-208ENST00000487086 OSCARQ8IYS5 282 aa30.42■■■□□ 2.46
NSFL1C-208ENST00000487086 PRDM2Q13029 1718 aa30.39■■■□□ 2.46
NSFL1C-208ENST00000487086 CCDC88BA6NC98 1476 aa30.28■■■□□ 2.44
NSFL1C-208ENST00000487086 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
NSFL1C-208ENST00000487086 RIMBP3CA6NJZ7 1639 aa30.14■■■□□ 2.41
NSFL1C-208ENST00000487086 RIMBP3BA6NNM3 1639 aa30.14■■■□□ 2.41
NSFL1C-208ENST00000487086 RIMBP3Q9UFD9 1639 aa30.14■■■□□ 2.41
NSFL1C-208ENST00000487086 IFT140Q96RY7 1462 aa30.13■■■□□ 2.41
NSFL1C-208ENST00000487086 TOPBP1Q92547 1522 aa30.12■■■□□ 2.41
NSFL1C-208ENST00000487086 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
NSFL1C-208ENST00000487086 EIF4G3O43432 1585 aaKnown RBP30.02■■■□□ 2.4
NSFL1C-208ENST00000487086 ARHGEF11O15085 1522 aa29.97■■■□□ 2.39
NSFL1C-208ENST00000487086 DNMBPQ6XZF7 1577 aa29.97■■■□□ 2.39
NSFL1C-208ENST00000487086 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
NSFL1C-208ENST00000487086 CHD1O14646 1710 aa29.91■■■□□ 2.38
NSFL1C-208ENST00000487086 TARBP1Q13395 1621 aaKnown RBP29.9■■■□□ 2.38
NSFL1C-208ENST00000487086 AQRO60306 1485 aaKnown RBP eCLIP29.89■■■□□ 2.382e-7■■□□□ 14.2
NSFL1C-208ENST00000487086 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
NSFL1C-208ENST00000487086 CYB5RLQ6IPT4 315 aa29.79■■■□□ 2.36
NSFL1C-208ENST00000487086 RAD54L2Q9Y4B4 1467 aa29.74■■■□□ 2.35
NSFL1C-208ENST00000487086 FBLN2P98095 1184 aa29.74■■■□□ 2.35
NSFL1C-208ENST00000487086 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
NSFL1C-208ENST00000487086 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
NSFL1C-208ENST00000487086 SOGA1O94964 1423 aa29.64■■■□□ 2.34
NSFL1C-208ENST00000487086 FGD5Q6ZNL6 1462 aa29.58■■■□□ 2.33
NSFL1C-208ENST00000487086 SNAPC4Q5SXM2 1469 aa29.55■■■□□ 2.32
NSFL1C-208ENST00000487086 TRHP20396 242 aaPredicted RBP29.54■■■□□ 2.32
NSFL1C-208ENST00000487086 CUX1P39880 1505 aa29.53■■■□□ 2.32
NSFL1C-208ENST00000487086 CLASP1Q7Z460 1538 aa29.47■■■□□ 2.31
NSFL1C-208ENST00000487086 WDR97A6NE52 1622 aa29.46■■■□□ 2.31
NSFL1C-208ENST00000487086 CHMP7Q8WUX9 453 aaPredicted RBP29.43■■■□□ 2.3
NSFL1C-208ENST00000487086 MAGI1Q96QZ7 1491 aaPredicted RBP29.4■■■□□ 2.3
NSFL1C-208ENST00000487086 SYNJ1O43426 1573 aa29.39■■■□□ 2.3
NSFL1C-208ENST00000487086 GRIN2BQ13224 1484 aa29.39■■■□□ 2.3
NSFL1C-208ENST00000487086 PBRM1Q86U86 1689 aa29.36■■■□□ 2.29
NSFL1C-208ENST00000487086 SYNJ2O15056 1496 aa29.33■■■□□ 2.29
NSFL1C-208ENST00000487086 GAPVD1Q14C86 1478 aa29.27■■■□□ 2.28
NSFL1C-208ENST00000487086 ABCA5Q8WWZ7 1642 aa29.21■■■□□ 2.27
NSFL1C-208ENST00000487086 BIVM-ERCC5R4GMW8 1640 aa29.21■■■□□ 2.27
NSFL1C-208ENST00000487086 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.26
NSFL1C-208ENST00000487086 TOP2BQ02880 1626 aa29.19■■■□□ 2.26
NSFL1C-208ENST00000487086 ABCA10Q8WWZ4 1543 aa29.19■■■□□ 2.26
NSFL1C-208ENST00000487086 ERCC6L2Q5T890 1561 aa29.09■■■□□ 2.25
NSFL1C-208ENST00000487086 GRIN2AQ12879 1464 aa29.04■■■□□ 2.24
NSFL1C-208ENST00000487086 ADAMTS12P58397 1594 aa29.01■■■□□ 2.23
NSFL1C-208ENST00000487086 CEP170Q5SW79 1584 aa29.01■■■□□ 2.23
NSFL1C-208ENST00000487086 NUP160Q12769 1436 aa28.94■■■□□ 2.22
NSFL1C-208ENST00000487086 SHROOM2Q13796 1616 aa28.88■■■□□ 2.21
NSFL1C-208ENST00000487086 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
NSFL1C-208ENST00000487086 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
NSFL1C-208ENST00000487086 ERICH3Q5RHP9 1530 aa28.8■■■□□ 2.2
NSFL1C-208ENST00000487086 KIF13AQ9H1H9 1805 aa28.73■■■□□ 2.19
NSFL1C-208ENST00000487086 PRG4Q92954 1404 aaPredicted RBP28.7■■■□□ 2.19
NSFL1C-208ENST00000487086 JPH4Q96JJ6 628 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms