RNA–Protein interactions for RNA: ENST00000487059.1

MRPL43-212, Transcript of mitochondrial ribosomal protein L43, humanhuman

TSL 2

Gene MRPL43, Length 810 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL43-212ENST00000487059 NISCHQ9Y2I1 1504 aa50.6■■■■■ 5.69
MRPL43-212ENST00000487059 ABCC9O60706 1549 aa45.78■■■■■ 4.92
MRPL43-212ENST00000487059 CCDC180Q9P1Z9 1646 aa45.56■■■■■ 4.88
MRPL43-212ENST00000487059 RB1CC1Q8TDY2 1594 aa43.53■■■■■ 4.56
MRPL43-212ENST00000487059 DNAJC5BQ9UF47 199 aa43.25■■■■■ 4.51
MRPL43-212ENST00000487059 NACADO15069 1562 aa43.19■■■■■ 4.5
MRPL43-212ENST00000487059 DCAF8L2P0C7V8 631 aa42.68■■■■■ 4.42
MRPL43-212ENST00000487059 MYO15BQ96JP2 1530 aa42.58■■■■■ 4.41
MRPL43-212ENST00000487059 PABPN1Q86U42 306 aaKnown RBP eCLIP42.54■■■■■ 4.4
MRPL43-212ENST00000487059 UNC13AQ9UPW8 1703 aa42.4■■■■■ 4.38
MRPL43-212ENST00000487059 BICRAQ9NZM4 1560 aa42.24■■■■■ 4.35
MRPL43-212ENST00000487059 ZCCHC6Q5VYS8 1495 aaKnown RBP41.88■■■■■ 4.29
MRPL43-212ENST00000487059 DCAF1Q9Y4B6 1507 aa41.88■■■■■ 4.29
MRPL43-212ENST00000487059 SHROOM4Q9ULL8 1493 aa41.81■■■■■ 4.28
MRPL43-212ENST00000487059 CC2D2AQ9P2K1 1620 aa41.37■■■■■ 4.21
MRPL43-212ENST00000487059 SCRIBQ14160 1630 aa41.36■■■■■ 4.21
MRPL43-212ENST00000487059 CECR2Q9BXF3 1484 aa41.34■■■■■ 4.21
MRPL43-212ENST00000487059 EIF4G1Q04637 1599 aaKnown RBP41.24■■■■■ 4.19
MRPL43-212ENST00000487059 DNAJC5Q9H3Z4 198 aa40.06■■■■■ 4
MRPL43-212ENST00000487059 NCAPD3P42695 1498 aa39.89■■■■□ 3.98
MRPL43-212ENST00000487059 CUX2O14529 1486 aa39.74■■■■□ 3.95
MRPL43-212ENST00000487059 ATAD2BQ9ULI0 1458 aa39.68■■■■□ 3.94
MRPL43-212ENST00000487059 ERCC6Q03468 1493 aa39.58■■■■□ 3.93
MRPL43-212ENST00000487059 SMARCA2P51531 1590 aa39.56■■■■□ 3.92
MRPL43-212ENST00000487059 HMGXB3Q12766 1538 aa39.55■■■■□ 3.92
MRPL43-212ENST00000487059 SMARCA4P51532 1647 aa39.51■■■■□ 3.91
MRPL43-212ENST00000487059 BAZ1AQ9NRL2 1556 aaPredicted RBP39.31■■■■□ 3.88
MRPL43-212ENST00000487059 BAZ1BQ9UIG0 1483 aaKnown RBP39.24■■■■□ 3.87
MRPL43-212ENST00000487059 NESP48681 1621 aa39.22■■■■□ 3.87
MRPL43-212ENST00000487059 PEG3Q9GZU2 1588 aa39.22■■■■□ 3.87
MRPL43-212ENST00000487059 LAMC3Q9Y6N6 1575 aa39.01■■■■□ 3.84
MRPL43-212ENST00000487059 THOC2Q8NI27 1593 aaKnown RBP38.95■■■■□ 3.83
MRPL43-212ENST00000487059 MROH2BQ7Z745 1585 aa38.93■■■■□ 3.82
MRPL43-212ENST00000487059 PDS5BQ9NTI5 1447 aa38.81■■■■□ 3.8
MRPL43-212ENST00000487059 KIF21AQ7Z4S6 1674 aa38.68■■■■□ 3.78
MRPL43-212ENST00000487059 CADPSQ9ULU8 1353 aa38.64■■■■□ 3.78
MRPL43-212ENST00000487059 MRC2Q9UBG0 1479 aa38.47■■■■□ 3.75
MRPL43-212ENST00000487059 WIZO95785 1651 aa38.39■■■■□ 3.74
MRPL43-212ENST00000487059 WDR62O43379 1518 aa38.39■■■■□ 3.74
MRPL43-212ENST00000487059 CEP164Q9UPV0 1460 aa38.23■■■■□ 3.71
MRPL43-212ENST00000487059 FANCD2Q9BXW9 1451 aa38.15■■■■□ 3.7
MRPL43-212ENST00000487059 CFTRP13569 1480 aa38.14■■■■□ 3.7
MRPL43-212ENST00000487059 RSF1Q96T23 1441 aaPredicted RBP38.04■■■■□ 3.68
MRPL43-212ENST00000487059 TRIM41Q8WV44 630 aa38.01■■■■□ 3.68
MRPL43-212ENST00000487059 TOP2AP11388 1531 aaKnown RBP37.98■■■■□ 3.67
MRPL43-212ENST00000487059 URB2Q14146 1524 aaKnown RBP37.84■■■■□ 3.65
MRPL43-212ENST00000487059 OSCARQ8IYS5 282 aa37.82■■■■□ 3.64
MRPL43-212ENST00000487059 PRDM2Q13029 1718 aa37.62■■■■□ 3.61
MRPL43-212ENST00000487059 CCDC88BA6NC98 1476 aa37.53■■■■□ 3.6
MRPL43-212ENST00000487059 IFT140Q96RY7 1462 aa37.52■■■■□ 3.6
MRPL43-212ENST00000487059 ZNF608Q9ULD9 1512 aaPredicted RBP37.41■■■■□ 3.58
MRPL43-212ENST00000487059 TOPBP1Q92547 1522 aa37.39■■■■□ 3.58
MRPL43-212ENST00000487059 ABCC8Q09428 1581 aa37.38■■■■□ 3.57
MRPL43-212ENST00000487059 RIMBP3CA6NJZ7 1639 aa37.29■■■■□ 3.56
MRPL43-212ENST00000487059 RIMBP3BA6NNM3 1639 aa37.29■■■■□ 3.56
MRPL43-212ENST00000487059 RIMBP3Q9UFD9 1639 aa37.29■■■■□ 3.56
MRPL43-212ENST00000487059 DNMBPQ6XZF7 1577 aa37.24■■■■□ 3.55
MRPL43-212ENST00000487059 EIF4G3O43432 1585 aaKnown RBP37.19■■■■□ 3.54
MRPL43-212ENST00000487059 ARHGEF11O15085 1522 aa37.18■■■■□ 3.54
MRPL43-212ENST00000487059 TARBP1Q13395 1621 aaKnown RBP37.08■■■■□ 3.53
MRPL43-212ENST00000487059 AQRO60306 1485 aaKnown RBP eCLIP37.02■■■■□ 3.525e-8■■■■□ 19.3
MRPL43-212ENST00000487059 POLA1P09884 1462 aaPredicted RBP37■■■■□ 3.51
MRPL43-212ENST00000487059 CHD1O14646 1710 aa36.91■■■■□ 3.5
MRPL43-212ENST00000487059 CYB5RLQ6IPT4 315 aa36.88■■■■□ 3.49
MRPL43-212ENST00000487059 SOGA1O94964 1423 aa36.82■■■■□ 3.48
MRPL43-212ENST00000487059 RAD54L2Q9Y4B4 1467 aa36.81■■■■□ 3.48
MRPL43-212ENST00000487059 ARAP1Q96P48 1450 aa36.8■■■■□ 3.48
MRPL43-212ENST00000487059 WDR97A6NE52 1622 aa36.79■■■■□ 3.48
MRPL43-212ENST00000487059 FBLN2P98095 1184 aa36.79■■■■□ 3.48
MRPL43-212ENST00000487059 TDRD9Q8NDG6 1382 aaKnown RBP36.74■■■■□ 3.47
MRPL43-212ENST00000487059 FGD5Q6ZNL6 1462 aa36.69■■■■□ 3.46
MRPL43-212ENST00000487059 SNAPC4Q5SXM2 1469 aa36.65■■■■□ 3.46
MRPL43-212ENST00000487059 MAGI1Q96QZ7 1491 aaPredicted RBP36.62■■■■□ 3.45
MRPL43-212ENST00000487059 CUX1P39880 1505 aa36.6■■■■□ 3.45
MRPL43-212ENST00000487059 CLASP1Q7Z460 1538 aa36.6■■■■□ 3.45
MRPL43-212ENST00000487059 GRIN2BQ13224 1484 aa36.56■■■■□ 3.44
MRPL43-212ENST00000487059 TRHP20396 242 aaPredicted RBP36.55■■■■□ 3.44
MRPL43-212ENST00000487059 CHMP7Q8WUX9 453 aaPredicted RBP36.55■■■■□ 3.44
MRPL43-212ENST00000487059 SYNJ1O43426 1573 aa36.54■■■■□ 3.44
MRPL43-212ENST00000487059 SYNJ2O15056 1496 aa36.49■■■■□ 3.43
MRPL43-212ENST00000487059 GAPVD1Q14C86 1478 aa36.37■■■■□ 3.41
MRPL43-212ENST00000487059 ABCA10Q8WWZ4 1543 aa36.32■■■■□ 3.4
MRPL43-212ENST00000487059 PBRM1Q86U86 1689 aa36.29■■■■□ 3.4
MRPL43-212ENST00000487059 ABCA5Q8WWZ7 1642 aa36.25■■■■□ 3.39
MRPL43-212ENST00000487059 WRNQ14191 1432 aaPredicted RBP eCLIP36.09■■■■□ 3.37
MRPL43-212ENST00000487059 GRIN2AQ12879 1464 aa36.07■■■■□ 3.37
MRPL43-212ENST00000487059 NUP160Q12769 1436 aa36.01■■■■□ 3.36
MRPL43-212ENST00000487059 ADAMTS12P58397 1594 aa35.99■■■■□ 3.35
MRPL43-212ENST00000487059 SUPT5HO00267 1087 aaKnown RBP35.96■■■■□ 3.35
MRPL43-212ENST00000487059 TOP2BQ02880 1626 aa35.95■■■■□ 3.35
MRPL43-212ENST00000487059 BIVM-ERCC5R4GMW8 1640 aa35.94■■■■□ 3.34
MRPL43-212ENST00000487059 FHAD1B1AJZ9 1412 aa35.92■■■■□ 3.34
MRPL43-212ENST00000487059 CEP170Q5SW79 1584 aa35.92■■■■□ 3.34
MRPL43-212ENST00000487059 ERCC6L2Q5T890 1561 aa35.91■■■■□ 3.34
MRPL43-212ENST00000487059 ERICH3Q5RHP9 1530 aa35.87■■■■□ 3.33
MRPL43-212ENST00000487059 SHROOM2Q13796 1616 aa35.86■■■■□ 3.33
MRPL43-212ENST00000487059 AEBP2Q6ZN18 517 aaPredicted RBP35.75■■■■□ 3.31
MRPL43-212ENST00000487059 PRG4Q92954 1404 aaPredicted RBP35.63■■■■□ 3.29
MRPL43-212ENST00000487059 JPH4Q96JJ6 628 aa35.6■■■■□ 3.29
MRPL43-212ENST00000487059 RUSC2Q8N2Y8 1516 aa35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms