RNA–Protein interactions for RNA: ENST00000487006.2

BUD23-217, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-217ENST00000487006 NISCHQ9Y2I1 1504 aa52.35■■■■■ 5.97
BUD23-217ENST00000487006 CCDC180Q9P1Z9 1646 aa46.54■■■■■ 5.04
BUD23-217ENST00000487006 ABCC9O60706 1549 aa45.57■■■■■ 4.89
BUD23-217ENST00000487006 RB1CC1Q8TDY2 1594 aa43.78■■■■■ 4.6
BUD23-217ENST00000487006 DCAF8L2P0C7V8 631 aa43.73■■■■■ 4.59
BUD23-217ENST00000487006 NACADO15069 1562 aa43.71■■■■■ 4.59
BUD23-217ENST00000487006 ZCCHC6Q5VYS8 1495 aaKnown RBP43.62■■■■■ 4.57
BUD23-217ENST00000487006 MYO15BQ96JP2 1530 aa43.41■■■■■ 4.54
BUD23-217ENST00000487006 DCAF1Q9Y4B6 1507 aa43.25■■■■■ 4.51
BUD23-217ENST00000487006 UNC13AQ9UPW8 1703 aa42.91■■■■■ 4.46
BUD23-217ENST00000487006 PABPN1Q86U42 306 aaKnown RBP eCLIP42.58■■■■■ 4.41
BUD23-217ENST00000487006 SCRIBQ14160 1630 aa42.54■■■■■ 4.4
BUD23-217ENST00000487006 BICRAQ9NZM4 1560 aa42.52■■■■■ 4.4
BUD23-217ENST00000487006 SHROOM4Q9ULL8 1493 aa41.94■■■■■ 4.3
BUD23-217ENST00000487006 DNAJC5BQ9UF47 199 aa41.82■■■■■ 4.29
BUD23-217ENST00000487006 EIF4G1Q04637 1599 aaKnown RBP41.37■■■■■ 4.21
BUD23-217ENST00000487006 CC2D2AQ9P2K1 1620 aa41.22■■■■■ 4.19
BUD23-217ENST00000487006 CECR2Q9BXF3 1484 aa40.91■■■■■ 4.14
BUD23-217ENST00000487006 SMARCA4P51532 1647 aa40.65■■■■■ 4.1
BUD23-217ENST00000487006 BAZ1AQ9NRL2 1556 aaPredicted RBP40.56■■■■■ 4.08
BUD23-217ENST00000487006 ATAD2BQ9ULI0 1458 aa40.39■■■■■ 4.06
BUD23-217ENST00000487006 MROH2BQ7Z745 1585 aa40.39■■■■■ 4.06
BUD23-217ENST00000487006 NCAPD3P42695 1498 aa40.32■■■■■ 4.05
BUD23-217ENST00000487006 SMARCA2P51531 1590 aa40.32■■■■■ 4.05
BUD23-217ENST00000487006 PEG3Q9GZU2 1588 aa40.2■■■■■ 4.03
BUD23-217ENST00000487006 HMGXB3Q12766 1538 aa40.16■■■■■ 4.02
BUD23-217ENST00000487006 BAZ1BQ9UIG0 1483 aaKnown RBP40.07■■■■■ 4
BUD23-217ENST00000487006 WIZO95785 1651 aa39.99■■■■□ 3.99
BUD23-217ENST00000487006 RSF1Q96T23 1441 aaPredicted RBP39.89■■■■□ 3.98
BUD23-217ENST00000487006 TOP2AP11388 1531 aaKnown RBP39.5■■■■□ 3.91
BUD23-217ENST00000487006 NESP48681 1621 aa39.47■■■■□ 3.91
BUD23-217ENST00000487006 LAMC3Q9Y6N6 1575 aa39.28■■■■□ 3.88
BUD23-217ENST00000487006 ERCC6Q03468 1493 aa39.24■■■■□ 3.87
BUD23-217ENST00000487006 CADPSQ9ULU8 1353 aa39.16■■■■□ 3.86
BUD23-217ENST00000487006 CCDC88BA6NC98 1476 aa39.04■■■■□ 3.84
BUD23-217ENST00000487006 KIF21AQ7Z4S6 1674 aa39.02■■■■□ 3.84
BUD23-217ENST00000487006 PDS5BQ9NTI5 1447 aa38.98■■■■□ 3.83
BUD23-217ENST00000487006 CFTRP13569 1480 aa38.94■■■■□ 3.82
BUD23-217ENST00000487006 SUPT5HO00267 1087 aaKnown RBP38.91■■■■□ 3.82
BUD23-217ENST00000487006 THOC2Q8NI27 1593 aaKnown RBP38.86■■■■□ 3.81
BUD23-217ENST00000487006 CUX2O14529 1486 aa38.78■■■■□ 3.8
BUD23-217ENST00000487006 FANCD2Q9BXW9 1451 aa38.75■■■■□ 3.79
BUD23-217ENST00000487006 PRDM2Q13029 1718 aa38.73■■■■□ 3.79
BUD23-217ENST00000487006 CEP164Q9UPV0 1460 aa38.69■■■■□ 3.78
BUD23-217ENST00000487006 MRC2Q9UBG0 1479 aa38.64■■■■□ 3.78
BUD23-217ENST00000487006 WDR62O43379 1518 aa38.53■■■■□ 3.76
BUD23-217ENST00000487006 URB2Q14146 1524 aaKnown RBP38.39■■■■□ 3.74
BUD23-217ENST00000487006 TOPBP1Q92547 1522 aa38.14■■■■□ 3.7
BUD23-217ENST00000487006 DNMBPQ6XZF7 1577 aa38.1■■■■□ 3.69
BUD23-217ENST00000487006 ABCC8Q09428 1581 aa38.04■■■■□ 3.68
BUD23-217ENST00000487006 CUX1P39880 1505 aa37.88■■■■□ 3.65
BUD23-217ENST00000487006 IFT140Q96RY7 1462 aa37.86■■■■□ 3.65
BUD23-217ENST00000487006 POLA1P09884 1462 aaPredicted RBP37.83■■■■□ 3.65
BUD23-217ENST00000487006 ZNF608Q9ULD9 1512 aaPredicted RBP37.77■■■■□ 3.64
BUD23-217ENST00000487006 FGD5Q6ZNL6 1462 aa37.75■■■■□ 3.63
BUD23-217ENST00000487006 TARBP1Q13395 1621 aaKnown RBP37.75■■■■□ 3.63
BUD23-217ENST00000487006 RAD54L2Q9Y4B4 1467 aa37.69■■■■□ 3.62
BUD23-217ENST00000487006 SOGA1O94964 1423 aa37.62■■■■□ 3.61
BUD23-217ENST00000487006 EIF4G3O43432 1585 aaKnown RBP37.62■■■■□ 3.61
BUD23-217ENST00000487006 WRNQ14191 1432 aaPredicted RBP eCLIP37.6■■■■□ 3.61
BUD23-217ENST00000487006 SYNJ1O43426 1573 aa37.59■■■■□ 3.61
BUD23-217ENST00000487006 DNAJC5Q9H3Z4 198 aa37.57■■■■□ 3.6
BUD23-217ENST00000487006 BIVM-ERCC5R4GMW8 1640 aa37.55■■■■□ 3.6
BUD23-217ENST00000487006 TOP2BQ02880 1626 aa37.54■■■■□ 3.6
BUD23-217ENST00000487006 AQRO60306 1485 aaKnown RBP eCLIP37.52■■■■□ 3.62e-7■■■■■ 31.1
BUD23-217ENST00000487006 WDR97A6NE52 1622 aa37.47■■■■□ 3.59
BUD23-217ENST00000487006 TDRD9Q8NDG6 1382 aaKnown RBP37.45■■■■□ 3.59
BUD23-217ENST00000487006 ABCA10Q8WWZ4 1543 aa37.34■■■■□ 3.57
BUD23-217ENST00000487006 ABCA5Q8WWZ7 1642 aa37.24■■■■□ 3.55
BUD23-217ENST00000487006 PBRM1Q86U86 1689 aa37.21■■■■□ 3.55
BUD23-217ENST00000487006 GAPVD1Q14C86 1478 aa37.2■■■■□ 3.55
BUD23-217ENST00000487006 GRIN2BQ13224 1484 aa37.19■■■■□ 3.54
BUD23-217ENST00000487006 SNAPC4Q5SXM2 1469 aa37.19■■■■□ 3.54
BUD23-217ENST00000487006 CHD1O14646 1710 aa37.18■■■■□ 3.54
BUD23-217ENST00000487006 OSCARQ8IYS5 282 aa37.15■■■■□ 3.54
BUD23-217ENST00000487006 MAGI1Q96QZ7 1491 aaPredicted RBP37.08■■■■□ 3.53
BUD23-217ENST00000487006 FBLN2P98095 1184 aa37.05■■■■□ 3.52
BUD23-217ENST00000487006 SYNJ2O15056 1496 aa36.95■■■■□ 3.51
BUD23-217ENST00000487006 CHMP7Q8WUX9 453 aaPredicted RBP36.91■■■■□ 3.5
BUD23-217ENST00000487006 ADAMTS12P58397 1594 aa36.89■■■■□ 3.5
BUD23-217ENST00000487006 ERICH3Q5RHP9 1530 aa36.88■■■■□ 3.49
BUD23-217ENST00000487006 KIF27Q86VH2 1401 aa36.78■■■■□ 3.48
BUD23-217ENST00000487006 FHAD1B1AJZ9 1412 aa36.76■■■■□ 3.47
BUD23-217ENST00000487006 GRIN2AQ12879 1464 aa36.74■■■■□ 3.47
BUD23-217ENST00000487006 CLASP1Q7Z460 1538 aa36.72■■■■□ 3.47
BUD23-217ENST00000487006 TRIM41Q8WV44 630 aa36.69■■■■□ 3.46
BUD23-217ENST00000487006 RIMBP3CA6NJZ7 1639 aa36.67■■■■□ 3.46
BUD23-217ENST00000487006 RIMBP3BA6NNM3 1639 aa36.67■■■■□ 3.46
BUD23-217ENST00000487006 RIMBP3Q9UFD9 1639 aa36.67■■■■□ 3.46
BUD23-217ENST00000487006 IGF1RP08069 1367 aa36.65■■■■□ 3.46
BUD23-217ENST00000487006 ARHGEF11O15085 1522 aa36.64■■■■□ 3.46
BUD23-217ENST00000487006 CEP170Q5SW79 1584 aa36.6■■■■□ 3.45
BUD23-217ENST00000487006 CUL7Q14999 1698 aa36.58■■■■□ 3.45
BUD23-217ENST00000487006 RUSC2Q8N2Y8 1516 aa36.56■■■■□ 3.44
BUD23-217ENST00000487006 NUP160Q12769 1436 aa36.56■■■■□ 3.44
BUD23-217ENST00000487006 CARMIL1Q5VZK9 1371 aa36.42■■■■□ 3.42
BUD23-217ENST00000487006 ARAP1Q96P48 1450 aa36.37■■■■□ 3.41
BUD23-217ENST00000487006 SHROOM2Q13796 1616 aa36.32■■■■□ 3.4
BUD23-217ENST00000487006 CHIC1Q5VXU3 224 aa36.29■■■■□ 3.4
BUD23-217ENST00000487006 ERCC6L2Q5T890 1561 aa36.27■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms