RNA–Protein interactions for RNA: ENST00000486827.1

RAD51C-210, Transcript of RAD51 paralog C, humanhuman

TSL 2

Gene RAD51C, Length 1,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51C-210ENST00000486827 NISCHQ9Y2I1 1504 aa32.37■■■□□ 2.77
RAD51C-210ENST00000486827 CCDC180Q9P1Z9 1646 aa28.8■■■□□ 2.2
RAD51C-210ENST00000486827 ABCC9O60706 1549 aa28.52■■■□□ 2.16
RAD51C-210ENST00000486827 RB1CC1Q8TDY2 1594 aa27.21■■□□□ 1.95
RAD51C-210ENST00000486827 DCAF8L2P0C7V8 631 aa27.14■■□□□ 1.94
RAD51C-210ENST00000486827 NACADO15069 1562 aa27.12■■□□□ 1.93
RAD51C-210ENST00000486827 ZCCHC6Q5VYS8 1495 aaKnown RBP26.93■■□□□ 1.9
RAD51C-210ENST00000486827 MYO15BQ96JP2 1530 aa26.86■■□□□ 1.89
RAD51C-210ENST00000486827 UNC13AQ9UPW8 1703 aa26.72■■□□□ 1.87
RAD51C-210ENST00000486827 DCAF1Q9Y4B6 1507 aa26.69■■□□□ 1.86
RAD51C-210ENST00000486827 PABPN1Q86U42 306 aaKnown RBP eCLIP26.64■■□□□ 1.85
RAD51C-210ENST00000486827 BICRAQ9NZM4 1560 aa26.53■■□□□ 1.84
RAD51C-210ENST00000486827 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
RAD51C-210ENST00000486827 SCRIBQ14160 1630 aa26.38■■□□□ 1.81
RAD51C-210ENST00000486827 SHROOM4Q9ULL8 1493 aa26.02■■□□□ 1.76
RAD51C-210ENST00000486827 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
RAD51C-210ENST00000486827 CC2D2AQ9P2K1 1620 aa25.76■■□□□ 1.71
RAD51C-210ENST00000486827 CECR2Q9BXF3 1484 aa25.59■■□□□ 1.69
RAD51C-210ENST00000486827 SMARCA4P51532 1647 aa25.17■■□□□ 1.62
RAD51C-210ENST00000486827 ATAD2BQ9ULI0 1458 aa25.09■■□□□ 1.61
RAD51C-210ENST00000486827 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
RAD51C-210ENST00000486827 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
RAD51C-210ENST00000486827 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
RAD51C-210ENST00000486827 SMARCA2P51531 1590 aa24.97■■□□□ 1.59
RAD51C-210ENST00000486827 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
RAD51C-210ENST00000486827 PEG3Q9GZU2 1588 aa24.89■■□□□ 1.57
RAD51C-210ENST00000486827 BAZ1BQ9UIG0 1483 aaKnown RBP24.84■■□□□ 1.57
RAD51C-210ENST00000486827 WIZO95785 1651 aa24.73■■□□□ 1.55
RAD51C-210ENST00000486827 NESP48681 1621 aa24.66■■□□□ 1.54
RAD51C-210ENST00000486827 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
RAD51C-210ENST00000486827 ERCC6Q03468 1493 aa24.5■■□□□ 1.51
RAD51C-210ENST00000486827 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
RAD51C-210ENST00000486827 TOP2AP11388 1531 aaKnown RBP24.38■■□□□ 1.49
RAD51C-210ENST00000486827 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
RAD51C-210ENST00000486827 KIF21AQ7Z4S6 1674 aa24.31■■□□□ 1.48
RAD51C-210ENST00000486827 CUX2O14529 1486 aa24.29■■□□□ 1.48
RAD51C-210ENST00000486827 THOC2Q8NI27 1593 aaKnown RBP24.28■■□□□ 1.48
RAD51C-210ENST00000486827 PDS5BQ9NTI5 1447 aa24.23■■□□□ 1.47
RAD51C-210ENST00000486827 CFTRP13569 1480 aa24.15■■□□□ 1.46
RAD51C-210ENST00000486827 CCDC88BA6NC98 1476 aa24.13■■□□□ 1.45
RAD51C-210ENST00000486827 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
RAD51C-210ENST00000486827 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
RAD51C-210ENST00000486827 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
RAD51C-210ENST00000486827 WDR62O43379 1518 aa24■■□□□ 1.43
RAD51C-210ENST00000486827 PRDM2Q13029 1718 aa23.92■■□□□ 1.42
RAD51C-210ENST00000486827 URB2Q14146 1524 aaKnown RBP23.9■■□□□ 1.42
RAD51C-210ENST00000486827 DNAJC5Q9H3Z4 198 aa23.86■■□□□ 1.41
RAD51C-210ENST00000486827 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
RAD51C-210ENST00000486827 TOPBP1Q92547 1522 aa23.68■■□□□ 1.38
RAD51C-210ENST00000486827 DNMBPQ6XZF7 1577 aa23.6■■□□□ 1.37
RAD51C-210ENST00000486827 ZNF608Q9ULD9 1512 aaPredicted RBP23.56■■□□□ 1.36
RAD51C-210ENST00000486827 ABCC8Q09428 1581 aa23.53■■□□□ 1.36
RAD51C-210ENST00000486827 IFT140Q96RY7 1462 aa23.52■■□□□ 1.36
RAD51C-210ENST00000486827 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
RAD51C-210ENST00000486827 CUX1P39880 1505 aa23.46■■□□□ 1.35
RAD51C-210ENST00000486827 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
RAD51C-210ENST00000486827 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
RAD51C-210ENST00000486827 EIF4G3O43432 1585 aaKnown RBP23.41■■□□□ 1.34
RAD51C-210ENST00000486827 FGD5Q6ZNL6 1462 aa23.39■■□□□ 1.33
RAD51C-210ENST00000486827 AQRO60306 1485 aaKnown RBP eCLIP23.37■■□□□ 1.33
RAD51C-210ENST00000486827 SOGA1O94964 1423 aa23.34■■□□□ 1.33
RAD51C-210ENST00000486827 TDRD9Q8NDG6 1382 aaKnown RBP23.29■■□□□ 1.32
RAD51C-210ENST00000486827 OSCARQ8IYS5 282 aa23.25■■□□□ 1.31
RAD51C-210ENST00000486827 WDR97A6NE52 1622 aa23.21■■□□□ 1.31
RAD51C-210ENST00000486827 SYNJ1O43426 1573 aa23.2■■□□□ 1.3
RAD51C-210ENST00000486827 WRNQ14191 1432 aaPredicted RBP eCLIP23.17■■□□□ 1.3
RAD51C-210ENST00000486827 CHD1O14646 1710 aa23.16■■□□□ 1.3
RAD51C-210ENST00000486827 BIVM-ERCC5R4GMW8 1640 aa23.14■■□□□ 1.3
RAD51C-210ENST00000486827 TOP2BQ02880 1626 aa23.14■■□□□ 1.29
RAD51C-210ENST00000486827 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
RAD51C-210ENST00000486827 ABCA10Q8WWZ4 1543 aa23.11■■□□□ 1.29
RAD51C-210ENST00000486827 FBLN2P98095 1184 aa23.08■■□□□ 1.28
RAD51C-210ENST00000486827 ABCA5Q8WWZ7 1642 aa23.07■■□□□ 1.28
RAD51C-210ENST00000486827 GRIN2BQ13224 1484 aa23.07■■□□□ 1.28
RAD51C-210ENST00000486827 GAPVD1Q14C86 1478 aa23.06■■□□□ 1.28
RAD51C-210ENST00000486827 PBRM1Q86U86 1689 aa23.05■■□□□ 1.28
RAD51C-210ENST00000486827 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
RAD51C-210ENST00000486827 MAGI1Q96QZ7 1491 aaPredicted RBP23.01■■□□□ 1.27
RAD51C-210ENST00000486827 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
RAD51C-210ENST00000486827 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
RAD51C-210ENST00000486827 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
RAD51C-210ENST00000486827 ARHGEF11O15085 1522 aa22.95■■□□□ 1.26
RAD51C-210ENST00000486827 SYNJ2O15056 1496 aa22.94■■□□□ 1.26
RAD51C-210ENST00000486827 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
RAD51C-210ENST00000486827 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
RAD51C-210ENST00000486827 ADAMTS12P58397 1594 aa22.87■■□□□ 1.25
RAD51C-210ENST00000486827 GRIN2AQ12879 1464 aa22.8■■□□□ 1.24
RAD51C-210ENST00000486827 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
RAD51C-210ENST00000486827 ARAP1Q96P48 1450 aa22.8■■□□□ 1.24
RAD51C-210ENST00000486827 FHAD1B1AJZ9 1412 aa22.76■■□□□ 1.23
RAD51C-210ENST00000486827 CEP170Q5SW79 1584 aa22.75■■□□□ 1.23
RAD51C-210ENST00000486827 CYB5RLQ6IPT4 315 aa22.75■■□□□ 1.23
RAD51C-210ENST00000486827 NUP160Q12769 1436 aa22.72■■□□□ 1.23
RAD51C-210ENST00000486827 ERCC6L2Q5T890 1561 aa22.66■■□□□ 1.22
RAD51C-210ENST00000486827 IGF1RP08069 1367 aa22.66■■□□□ 1.22
RAD51C-210ENST00000486827 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
RAD51C-210ENST00000486827 SHROOM2Q13796 1616 aa22.57■■□□□ 1.2
RAD51C-210ENST00000486827 RUSC2Q8N2Y8 1516 aa22.56■■□□□ 1.2
RAD51C-210ENST00000486827 CUL7Q14999 1698 aa22.53■■□□□ 1.2
RAD51C-210ENST00000486827 CARMIL1Q5VZK9 1371 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms