RNA–Protein interactions for RNA: ENST00000486681.5

PRKCZ-220, Transcript of protein kinase C zeta, humanhuman

TSL 3

Gene PRKCZ, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCZ-220ENST00000486681 NISCHQ9Y2I1 1504 aa45.93■■■■■ 4.94
PRKCZ-220ENST00000486681 CCDC180Q9P1Z9 1646 aa41.02■■■■■ 4.16
PRKCZ-220ENST00000486681 ABCC9O60706 1549 aa40.42■■■■■ 4.06
PRKCZ-220ENST00000486681 RB1CC1Q8TDY2 1594 aa38.7■■■■□ 3.79
PRKCZ-220ENST00000486681 NACADO15069 1562 aa38.56■■■■□ 3.76
PRKCZ-220ENST00000486681 DCAF8L2P0C7V8 631 aa38.43■■■■□ 3.74
PRKCZ-220ENST00000486681 ZCCHC6Q5VYS8 1495 aaKnown RBP38.22■■■■□ 3.71
PRKCZ-220ENST00000486681 MYO15BQ96JP2 1530 aa38.18■■■■□ 3.7
PRKCZ-220ENST00000486681 UNC13AQ9UPW8 1703 aa38.02■■■■□ 3.68
PRKCZ-220ENST00000486681 DCAF1Q9Y4B6 1507 aa37.94■■■■□ 3.66
PRKCZ-220ENST00000486681 PABPN1Q86U42 306 aaKnown RBP eCLIP37.67■■■■□ 3.62
PRKCZ-220ENST00000486681 BICRAQ9NZM4 1560 aa37.63■■■■□ 3.62
PRKCZ-220ENST00000486681 SCRIBQ14160 1630 aa37.46■■■■□ 3.59
PRKCZ-220ENST00000486681 DNAJC5BQ9UF47 199 aa37.35■■■■□ 3.57
PRKCZ-220ENST00000486681 SHROOM4Q9ULL8 1493 aa37.05■■■■□ 3.52
PRKCZ-220ENST00000486681 EIF4G1Q04637 1599 aaKnown RBP36.61■■■■□ 3.45
PRKCZ-220ENST00000486681 CC2D2AQ9P2K1 1620 aa36.56■■■■□ 3.44
PRKCZ-220ENST00000486681 CECR2Q9BXF3 1484 aa36.31■■■■□ 3.4
PRKCZ-220ENST00000486681 SMARCA4P51532 1647 aa35.76■■■■□ 3.32
PRKCZ-220ENST00000486681 BAZ1AQ9NRL2 1556 aaPredicted RBP35.61■■■■□ 3.29
PRKCZ-220ENST00000486681 ATAD2BQ9ULI0 1458 aa35.58■■■■□ 3.29
PRKCZ-220ENST00000486681 NCAPD3P42695 1498 aa35.55■■■■□ 3.28
PRKCZ-220ENST00000486681 SMARCA2P51531 1590 aa35.51■■■■□ 3.27
PRKCZ-220ENST00000486681 MROH2BQ7Z745 1585 aa35.45■■■■□ 3.27
PRKCZ-220ENST00000486681 HMGXB3Q12766 1538 aa35.42■■■■□ 3.26
PRKCZ-220ENST00000486681 PEG3Q9GZU2 1588 aa35.36■■■■□ 3.25
PRKCZ-220ENST00000486681 BAZ1BQ9UIG0 1483 aaKnown RBP35.27■■■■□ 3.24
PRKCZ-220ENST00000486681 WIZO95785 1651 aa35.1■■■■□ 3.21
PRKCZ-220ENST00000486681 NESP48681 1621 aa34.92■■■■□ 3.18
PRKCZ-220ENST00000486681 RSF1Q96T23 1441 aaPredicted RBP34.87■■■■□ 3.17
PRKCZ-220ENST00000486681 ERCC6Q03468 1493 aa34.8■■■■□ 3.16
PRKCZ-220ENST00000486681 LAMC3Q9Y6N6 1575 aa34.72■■■■□ 3.15
PRKCZ-220ENST00000486681 TOP2AP11388 1531 aaKnown RBP34.64■■■■□ 3.14
PRKCZ-220ENST00000486681 KIF21AQ7Z4S6 1674 aa34.57■■■■□ 3.12
PRKCZ-220ENST00000486681 CUX2O14529 1486 aa34.52■■■■□ 3.12
PRKCZ-220ENST00000486681 CADPSQ9ULU8 1353 aa34.49■■■■□ 3.11
PRKCZ-220ENST00000486681 THOC2Q8NI27 1593 aaKnown RBP34.49■■■■□ 3.11
PRKCZ-220ENST00000486681 PDS5BQ9NTI5 1447 aa34.41■■■■□ 3.1
PRKCZ-220ENST00000486681 CFTRP13569 1480 aa34.26■■■■□ 3.07
PRKCZ-220ENST00000486681 CCDC88BA6NC98 1476 aa34.2■■■■□ 3.07
PRKCZ-220ENST00000486681 FANCD2Q9BXW9 1451 aa34.16■■■■□ 3.06
PRKCZ-220ENST00000486681 MRC2Q9UBG0 1479 aa34.16■■■■□ 3.06
PRKCZ-220ENST00000486681 CEP164Q9UPV0 1460 aa34.14■■■■□ 3.06
PRKCZ-220ENST00000486681 PRDM2Q13029 1718 aa34.14■■■■□ 3.06
PRKCZ-220ENST00000486681 WDR62O43379 1518 aa34.09■■■■□ 3.05
PRKCZ-220ENST00000486681 URB2Q14146 1524 aaKnown RBP33.89■■■■□ 3.02
PRKCZ-220ENST00000486681 DNAJC5Q9H3Z4 198 aa33.77■■■■□ 3
PRKCZ-220ENST00000486681 SUPT5HO00267 1087 aaKnown RBP33.75■■■□□ 2.99
PRKCZ-220ENST00000486681 TOPBP1Q92547 1522 aa33.61■■■□□ 2.97
PRKCZ-220ENST00000486681 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
PRKCZ-220ENST00000486681 ABCC8Q09428 1581 aa33.47■■■□□ 2.95
PRKCZ-220ENST00000486681 IFT140Q96RY7 1462 aa33.41■■■□□ 2.94
PRKCZ-220ENST00000486681 ZNF608Q9ULD9 1512 aaPredicted RBP33.37■■■□□ 2.93
PRKCZ-220ENST00000486681 TARBP1Q13395 1621 aaKnown RBP33.3■■■□□ 2.92
PRKCZ-220ENST00000486681 POLA1P09884 1462 aaPredicted RBP33.3■■■□□ 2.92
PRKCZ-220ENST00000486681 CUX1P39880 1505 aa33.28■■■□□ 2.92
PRKCZ-220ENST00000486681 EIF4G3O43432 1585 aaKnown RBP33.26■■■□□ 2.92
PRKCZ-220ENST00000486681 FGD5Q6ZNL6 1462 aa33.18■■■□□ 2.9
PRKCZ-220ENST00000486681 RAD54L2Q9Y4B4 1467 aa33.18■■■□□ 2.9
PRKCZ-220ENST00000486681 AQRO60306 1485 aaKnown RBP eCLIP33.1■■■□□ 2.89
PRKCZ-220ENST00000486681 SOGA1O94964 1423 aa33.09■■■□□ 2.89
PRKCZ-220ENST00000486681 WDR97A6NE52 1622 aa33.02■■■□□ 2.88
PRKCZ-220ENST00000486681 TDRD9Q8NDG6 1382 aaKnown RBP32.97■■■□□ 2.87
PRKCZ-220ENST00000486681 OSCARQ8IYS5 282 aa32.97■■■□□ 2.87
PRKCZ-220ENST00000486681 CHD1O14646 1710 aa32.96■■■□□ 2.87
PRKCZ-220ENST00000486681 SYNJ1O43426 1573 aa32.92■■■□□ 2.86
PRKCZ-220ENST00000486681 BIVM-ERCC5R4GMW8 1640 aa32.92■■■□□ 2.86
PRKCZ-220ENST00000486681 TOP2BQ02880 1626 aa32.89■■■□□ 2.86
PRKCZ-220ENST00000486681 WRNQ14191 1432 aaPredicted RBP eCLIP32.87■■■□□ 2.85
PRKCZ-220ENST00000486681 PBRM1Q86U86 1689 aa32.82■■■□□ 2.84
PRKCZ-220ENST00000486681 SNAPC4Q5SXM2 1469 aa32.81■■■□□ 2.84
PRKCZ-220ENST00000486681 ABCA10Q8WWZ4 1543 aa32.81■■■□□ 2.84
PRKCZ-220ENST00000486681 ABCA5Q8WWZ7 1642 aa32.78■■■□□ 2.84
PRKCZ-220ENST00000486681 GRIN2BQ13224 1484 aa32.75■■■□□ 2.83
PRKCZ-220ENST00000486681 GAPVD1Q14C86 1478 aa32.73■■■□□ 2.83
PRKCZ-220ENST00000486681 MAGI1Q96QZ7 1491 aaPredicted RBP32.7■■■□□ 2.83
PRKCZ-220ENST00000486681 FBLN2P98095 1184 aa32.7■■■□□ 2.83
PRKCZ-220ENST00000486681 RIMBP3CA6NJZ7 1639 aa32.66■■■□□ 2.82
PRKCZ-220ENST00000486681 RIMBP3BA6NNM3 1639 aa32.66■■■□□ 2.82
PRKCZ-220ENST00000486681 RIMBP3Q9UFD9 1639 aa32.66■■■□□ 2.82
PRKCZ-220ENST00000486681 TRIM41Q8WV44 630 aa32.6■■■□□ 2.81
PRKCZ-220ENST00000486681 SYNJ2O15056 1496 aa32.59■■■□□ 2.81
PRKCZ-220ENST00000486681 ARHGEF11O15085 1522 aa32.57■■■□□ 2.8
PRKCZ-220ENST00000486681 CHMP7Q8WUX9 453 aaPredicted RBP32.53■■■□□ 2.8
PRKCZ-220ENST00000486681 CLASP1Q7Z460 1538 aa32.51■■■□□ 2.79
PRKCZ-220ENST00000486681 ADAMTS12P58397 1594 aa32.49■■■□□ 2.79
PRKCZ-220ENST00000486681 ERICH3Q5RHP9 1530 aa32.41■■■□□ 2.78
PRKCZ-220ENST00000486681 GRIN2AQ12879 1464 aa32.36■■■□□ 2.77
PRKCZ-220ENST00000486681 FHAD1B1AJZ9 1412 aa32.32■■■□□ 2.76
PRKCZ-220ENST00000486681 ARAP1Q96P48 1450 aa32.31■■■□□ 2.76
PRKCZ-220ENST00000486681 CEP170Q5SW79 1584 aa32.29■■■□□ 2.76
PRKCZ-220ENST00000486681 NUP160Q12769 1436 aa32.22■■■□□ 2.75
PRKCZ-220ENST00000486681 CYB5RLQ6IPT4 315 aa32.2■■■□□ 2.75
PRKCZ-220ENST00000486681 KIF27Q86VH2 1401 aa32.17■■■□□ 2.74
PRKCZ-220ENST00000486681 CUL7Q14999 1698 aa32.1■■■□□ 2.73
PRKCZ-220ENST00000486681 ERCC6L2Q5T890 1561 aa32.1■■■□□ 2.73
PRKCZ-220ENST00000486681 IGF1RP08069 1367 aa32.08■■■□□ 2.73
PRKCZ-220ENST00000486681 SHROOM2Q13796 1616 aa32.08■■■□□ 2.73
PRKCZ-220ENST00000486681 RUSC2Q8N2Y8 1516 aa32.03■■■□□ 2.72
PRKCZ-220ENST00000486681 CARMIL1Q5VZK9 1371 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms