RNA–Protein interactions for RNA: ENST00000486631.5

PLSCR1-213, Transcript of phospholipid scramblase 1, humanhuman

TSL 5

Gene PLSCR1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-213ENST00000486631 NISCHQ9Y2I1 1504 aa30.9■■■□□ 2.54
PLSCR1-213ENST00000486631 ABCC9O60706 1549 aa28.34■■■□□ 2.13
PLSCR1-213ENST00000486631 CCDC180Q9P1Z9 1646 aa27.9■■■□□ 2.06
PLSCR1-213ENST00000486631 DNAJC5BQ9UF47 199 aa27.02■■□□□ 1.92
PLSCR1-213ENST00000486631 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
PLSCR1-213ENST00000486631 NACADO15069 1562 aa26.51■■□□□ 1.83
PLSCR1-213ENST00000486631 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
PLSCR1-213ENST00000486631 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.81
PLSCR1-213ENST00000486631 UNC13AQ9UPW8 1703 aa26.18■■□□□ 1.78
PLSCR1-213ENST00000486631 BICRAQ9NZM4 1560 aa26.01■■□□□ 1.75
PLSCR1-213ENST00000486631 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
PLSCR1-213ENST00000486631 SHROOM4Q9ULL8 1493 aa25.62■■□□□ 1.69
PLSCR1-213ENST00000486631 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
PLSCR1-213ENST00000486631 CC2D2AQ9P2K1 1620 aa25.59■■□□□ 1.69
PLSCR1-213ENST00000486631 DCAF1Q9Y4B6 1507 aa25.49■■□□□ 1.67
PLSCR1-213ENST00000486631 ZCCHC6Q5VYS8 1495 aaKnown RBP25.47■■□□□ 1.67
PLSCR1-213ENST00000486631 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
PLSCR1-213ENST00000486631 SCRIBQ14160 1630 aa25.38■■□□□ 1.65
PLSCR1-213ENST00000486631 DNAJC5Q9H3Z4 198 aa25.17■■□□□ 1.62
PLSCR1-213ENST00000486631 CUX2O14529 1486 aa24.62■■□□□ 1.53
PLSCR1-213ENST00000486631 ERCC6Q03468 1493 aa24.52■■□□□ 1.52
PLSCR1-213ENST00000486631 NCAPD3P42695 1498 aa24.49■■□□□ 1.51
PLSCR1-213ENST00000486631 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
PLSCR1-213ENST00000486631 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
PLSCR1-213ENST00000486631 HMGXB3Q12766 1538 aa24.23■■□□□ 1.47
PLSCR1-213ENST00000486631 NESP48681 1621 aa24.22■■□□□ 1.47
PLSCR1-213ENST00000486631 SMARCA4P51532 1647 aa24.18■■□□□ 1.46
PLSCR1-213ENST00000486631 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
PLSCR1-213ENST00000486631 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
PLSCR1-213ENST00000486631 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
PLSCR1-213ENST00000486631 LAMC3Q9Y6N6 1575 aa23.99■■□□□ 1.43
PLSCR1-213ENST00000486631 PEG3Q9GZU2 1588 aa23.96■■□□□ 1.43
PLSCR1-213ENST00000486631 PDS5BQ9NTI5 1447 aa23.9■■□□□ 1.42
PLSCR1-213ENST00000486631 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.42
PLSCR1-213ENST00000486631 TRIM41Q8WV44 630 aa23.87■■□□□ 1.41
PLSCR1-213ENST00000486631 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
PLSCR1-213ENST00000486631 CADPSQ9ULU8 1353 aa23.73■■□□□ 1.39
PLSCR1-213ENST00000486631 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
PLSCR1-213ENST00000486631 WDR62O43379 1518 aa23.62■■□□□ 1.37
PLSCR1-213ENST00000486631 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
PLSCR1-213ENST00000486631 OSCARQ8IYS5 282 aa23.5■■□□□ 1.35
PLSCR1-213ENST00000486631 WIZO95785 1651 aa23.49■■□□□ 1.35
PLSCR1-213ENST00000486631 FANCD2Q9BXW9 1451 aa23.44■■□□□ 1.34
PLSCR1-213ENST00000486631 CFTRP13569 1480 aa23.36■■□□□ 1.33
PLSCR1-213ENST00000486631 URB2Q14146 1524 aaKnown RBP23.26■■□□□ 1.31
PLSCR1-213ENST00000486631 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
PLSCR1-213ENST00000486631 RIMBP3CA6NJZ7 1639 aa23.15■■□□□ 1.3
PLSCR1-213ENST00000486631 RIMBP3BA6NNM3 1639 aa23.15■■□□□ 1.3
PLSCR1-213ENST00000486631 RIMBP3Q9UFD9 1639 aa23.15■■□□□ 1.3
PLSCR1-213ENST00000486631 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
PLSCR1-213ENST00000486631 PRDM2Q13029 1718 aa23.07■■□□□ 1.28
PLSCR1-213ENST00000486631 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
PLSCR1-213ENST00000486631 ZNF608Q9ULD9 1512 aaPredicted RBP23.05■■□□□ 1.28
PLSCR1-213ENST00000486631 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
PLSCR1-213ENST00000486631 CYB5RLQ6IPT4 315 aa22.97■■□□□ 1.27
PLSCR1-213ENST00000486631 TOPBP1Q92547 1522 aa22.94■■□□□ 1.26
PLSCR1-213ENST00000486631 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
PLSCR1-213ENST00000486631 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
PLSCR1-213ENST00000486631 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
PLSCR1-213ENST00000486631 TRHP20396 242 aaPredicted RBP22.86■■□□□ 1.25
PLSCR1-213ENST00000486631 CHD1O14646 1710 aa22.82■■□□□ 1.24
PLSCR1-213ENST00000486631 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
PLSCR1-213ENST00000486631 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.243e-7■■■□□ 16
PLSCR1-213ENST00000486631 FBLN2P98095 1184 aa22.8■■□□□ 1.24
PLSCR1-213ENST00000486631 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.24
PLSCR1-213ENST00000486631 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
PLSCR1-213ENST00000486631 POLA1P09884 1462 aaPredicted RBP22.67■■□□□ 1.22
PLSCR1-213ENST00000486631 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
PLSCR1-213ENST00000486631 SOGA1O94964 1423 aa22.61■■□□□ 1.21
PLSCR1-213ENST00000486631 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
PLSCR1-213ENST00000486631 CHMP7Q8WUX9 453 aaPredicted RBP22.56■■□□□ 1.2
PLSCR1-213ENST00000486631 AEBP2Q6ZN18 517 aaPredicted RBP22.54■■□□□ 1.2
PLSCR1-213ENST00000486631 SNAPC4Q5SXM2 1469 aa22.53■■□□□ 1.2
PLSCR1-213ENST00000486631 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.2
PLSCR1-213ENST00000486631 WDR97A6NE52 1622 aa22.51■■□□□ 1.19
PLSCR1-213ENST00000486631 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
PLSCR1-213ENST00000486631 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
PLSCR1-213ENST00000486631 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
PLSCR1-213ENST00000486631 GRIN2BQ13224 1484 aa22.44■■□□□ 1.18
PLSCR1-213ENST00000486631 SYNJ2O15056 1496 aa22.41■■□□□ 1.18
PLSCR1-213ENST00000486631 CUX1P39880 1505 aa22.37■■□□□ 1.17
PLSCR1-213ENST00000486631 GAPVD1Q14C86 1478 aa22.35■■□□□ 1.17
PLSCR1-213ENST00000486631 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
PLSCR1-213ENST00000486631 ABCA10Q8WWZ4 1543 aa22.19■■□□□ 1.14
PLSCR1-213ENST00000486631 ABCA5Q8WWZ7 1642 aa22.17■■□□□ 1.14
PLSCR1-213ENST00000486631 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.13
PLSCR1-213ENST00000486631 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
PLSCR1-213ENST00000486631 CEP170Q5SW79 1584 aa22.09■■□□□ 1.13
PLSCR1-213ENST00000486631 NUP160Q12769 1436 aa22.07■■□□□ 1.12
PLSCR1-213ENST00000486631 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
PLSCR1-213ENST00000486631 ADAMTS12P58397 1594 aa22.03■■□□□ 1.12
PLSCR1-213ENST00000486631 SHROOM2Q13796 1616 aa22.02■■□□□ 1.11
PLSCR1-213ENST00000486631 FHAD1B1AJZ9 1412 aa22■■□□□ 1.11
PLSCR1-213ENST00000486631 KIF13AQ9H1H9 1805 aa21.99■■□□□ 1.11
PLSCR1-213ENST00000486631 PRG4Q92954 1404 aaPredicted RBP21.93■■□□□ 1.1
PLSCR1-213ENST00000486631 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
PLSCR1-213ENST00000486631 JPH4Q96JJ6 628 aa21.92■■□□□ 1.1
PLSCR1-213ENST00000486631 TOP2BQ02880 1626 aa21.91■■□□□ 1.1
PLSCR1-213ENST00000486631 BIVM-ERCC5R4GMW8 1640 aa21.9■■□□□ 1.1
PLSCR1-213ENST00000486631 NPM1P06748 294 aaKnown RBP eCLIP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms