RNA–Protein interactions for RNA: ENST00000486440.5

PCOLCE-207, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 765 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-207ENST00000486440 NISCHQ9Y2I1 1504 aa44.85■■■■■ 4.77
PCOLCE-207ENST00000486440 CCDC180Q9P1Z9 1646 aa39.74■■■■□ 3.95
PCOLCE-207ENST00000486440 ABCC9O60706 1549 aa38.5■■■■□ 3.75
PCOLCE-207ENST00000486440 ZCCHC6Q5VYS8 1495 aaKnown RBP37.41■■■■□ 3.58
PCOLCE-207ENST00000486440 DCAF8L2P0C7V8 631 aa37.24■■■■□ 3.55
PCOLCE-207ENST00000486440 NACADO15069 1562 aa37.23■■■■□ 3.55
PCOLCE-207ENST00000486440 RB1CC1Q8TDY2 1594 aa37.17■■■■□ 3.54
PCOLCE-207ENST00000486440 MYO15BQ96JP2 1530 aa37.11■■■■□ 3.53
PCOLCE-207ENST00000486440 DCAF1Q9Y4B6 1507 aa37.1■■■■□ 3.53
PCOLCE-207ENST00000486440 UNC13AQ9UPW8 1703 aa36.58■■■■□ 3.45
PCOLCE-207ENST00000486440 SCRIBQ14160 1630 aa36.27■■■■□ 3.4
PCOLCE-207ENST00000486440 BICRAQ9NZM4 1560 aa36.17■■■■□ 3.38
PCOLCE-207ENST00000486440 PABPN1Q86U42 306 aaKnown RBP eCLIP36.04■■■■□ 3.36
PCOLCE-207ENST00000486440 SHROOM4Q9ULL8 1493 aa35.62■■■■□ 3.29
PCOLCE-207ENST00000486440 DNAJC5BQ9UF47 199 aa35.13■■■■□ 3.21
PCOLCE-207ENST00000486440 EIF4G1Q04637 1599 aaKnown RBP35.1■■■■□ 3.21
PCOLCE-207ENST00000486440 CECR2Q9BXF3 1484 aa34.94■■■■□ 3.18
PCOLCE-207ENST00000486440 CC2D2AQ9P2K1 1620 aa34.9■■■■□ 3.18
PCOLCE-207ENST00000486440 SMARCA4P51532 1647 aa34.74■■■■□ 3.15
PCOLCE-207ENST00000486440 BAZ1AQ9NRL2 1556 aaPredicted RBP34.69■■■■□ 3.14
PCOLCE-207ENST00000486440 MROH2BQ7Z745 1585 aa34.61■■■■□ 3.13
PCOLCE-207ENST00000486440 ATAD2BQ9ULI0 1458 aa34.43■■■■□ 3.1
PCOLCE-207ENST00000486440 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
PCOLCE-207ENST00000486440 SMARCA2P51531 1590 aa34.36■■■■□ 3.09
PCOLCE-207ENST00000486440 NCAPD3P42695 1498 aa34.35■■■■□ 3.09
PCOLCE-207ENST00000486440 WIZO95785 1651 aa34.3■■■■□ 3.08
PCOLCE-207ENST00000486440 RSF1Q96T23 1441 aaPredicted RBP34.3■■■■□ 3.08
PCOLCE-207ENST00000486440 HMGXB3Q12766 1538 aa34.2■■■■□ 3.07
PCOLCE-207ENST00000486440 BAZ1BQ9UIG0 1483 aaKnown RBP34.12■■■■□ 3.05
PCOLCE-207ENST00000486440 TOP2AP11388 1531 aaKnown RBP33.85■■■■□ 3.01
PCOLCE-207ENST00000486440 SUPT5HO00267 1087 aaKnown RBP33.63■■■□□ 2.97
PCOLCE-207ENST00000486440 CCDC88BA6NC98 1476 aa33.49■■■□□ 2.95
PCOLCE-207ENST00000486440 NESP48681 1621 aa33.48■■■□□ 2.95
PCOLCE-207ENST00000486440 LAMC3Q9Y6N6 1575 aa33.39■■■□□ 2.94
PCOLCE-207ENST00000486440 CADPSQ9ULU8 1353 aa33.34■■■□□ 2.93
PCOLCE-207ENST00000486440 CFTRP13569 1480 aa33.25■■■□□ 2.91
PCOLCE-207ENST00000486440 PRDM2Q13029 1718 aa33.16■■■□□ 2.9
PCOLCE-207ENST00000486440 KIF21AQ7Z4S6 1674 aa33.15■■■□□ 2.9
PCOLCE-207ENST00000486440 PDS5BQ9NTI5 1447 aa33.08■■■□□ 2.89
PCOLCE-207ENST00000486440 ERCC6Q03468 1493 aa33.06■■■□□ 2.88
PCOLCE-207ENST00000486440 FANCD2Q9BXW9 1451 aa32.96■■■□□ 2.87
PCOLCE-207ENST00000486440 THOC2Q8NI27 1593 aaKnown RBP32.9■■■□□ 2.86
PCOLCE-207ENST00000486440 CEP164Q9UPV0 1460 aa32.86■■■□□ 2.85
PCOLCE-207ENST00000486440 MRC2Q9UBG0 1479 aa32.76■■■□□ 2.84
PCOLCE-207ENST00000486440 WDR62O43379 1518 aa32.68■■■□□ 2.82
PCOLCE-207ENST00000486440 URB2Q14146 1524 aaKnown RBP32.67■■■□□ 2.82
PCOLCE-207ENST00000486440 CUX2O14529 1486 aa32.62■■■□□ 2.81
PCOLCE-207ENST00000486440 TOPBP1Q92547 1522 aa32.51■■■□□ 2.8
PCOLCE-207ENST00000486440 DNMBPQ6XZF7 1577 aa32.49■■■□□ 2.79
PCOLCE-207ENST00000486440 ABCC8Q09428 1581 aa32.46■■■□□ 2.79
PCOLCE-207ENST00000486440 CUX1P39880 1505 aa32.43■■■□□ 2.78
PCOLCE-207ENST00000486440 SYNJ1O43426 1573 aa32.28■■■□□ 2.76
PCOLCE-207ENST00000486440 WRNQ14191 1432 aaPredicted RBP eCLIP32.26■■■□□ 2.76
PCOLCE-207ENST00000486440 BIVM-ERCC5R4GMW8 1640 aa32.26■■■□□ 2.76
PCOLCE-207ENST00000486440 POLA1P09884 1462 aaPredicted RBP32.25■■■□□ 2.75
PCOLCE-207ENST00000486440 TOP2BQ02880 1626 aa32.23■■■□□ 2.75
PCOLCE-207ENST00000486440 FGD5Q6ZNL6 1462 aa32.23■■■□□ 2.75
PCOLCE-207ENST00000486440 TARBP1Q13395 1621 aaKnown RBP32.2■■■□□ 2.75
PCOLCE-207ENST00000486440 IFT140Q96RY7 1462 aa32.16■■■□□ 2.74
PCOLCE-207ENST00000486440 RAD54L2Q9Y4B4 1467 aa32.13■■■□□ 2.73
PCOLCE-207ENST00000486440 SOGA1O94964 1423 aa32.1■■■□□ 2.73
PCOLCE-207ENST00000486440 ZNF608Q9ULD9 1512 aaPredicted RBP32.07■■■□□ 2.72
PCOLCE-207ENST00000486440 WDR97A6NE52 1622 aa32.04■■■□□ 2.72
PCOLCE-207ENST00000486440 EIF4G3O43432 1585 aaKnown RBP31.95■■■□□ 2.71
PCOLCE-207ENST00000486440 ABCA10Q8WWZ4 1543 aa31.92■■■□□ 2.7
PCOLCE-207ENST00000486440 AQRO60306 1485 aaKnown RBP eCLIP31.91■■■□□ 2.74e-7■■■□□ 17.5
PCOLCE-207ENST00000486440 TDRD9Q8NDG6 1382 aaKnown RBP31.89■■■□□ 2.7
PCOLCE-207ENST00000486440 ABCA5Q8WWZ7 1642 aa31.82■■■□□ 2.68
PCOLCE-207ENST00000486440 PBRM1Q86U86 1689 aa31.76■■■□□ 2.67
PCOLCE-207ENST00000486440 GAPVD1Q14C86 1478 aa31.74■■■□□ 2.67
PCOLCE-207ENST00000486440 TRIM41Q8WV44 630 aa31.72■■■□□ 2.67
PCOLCE-207ENST00000486440 GRIN2BQ13224 1484 aa31.66■■■□□ 2.66
PCOLCE-207ENST00000486440 CHIC1Q5VXU3 224 aa31.65■■■□□ 2.66
PCOLCE-207ENST00000486440 SNAPC4Q5SXM2 1469 aa31.59■■■□□ 2.65
PCOLCE-207ENST00000486440 CHD1O14646 1710 aa31.57■■■□□ 2.64
PCOLCE-207ENST00000486440 MAGI1Q96QZ7 1491 aaPredicted RBP31.54■■■□□ 2.64
PCOLCE-207ENST00000486440 KIF27Q86VH2 1401 aa31.54■■■□□ 2.64
PCOLCE-207ENST00000486440 ERICH3Q5RHP9 1530 aa31.54■■■□□ 2.64
PCOLCE-207ENST00000486440 RUSC2Q8N2Y8 1516 aa31.52■■■□□ 2.64
PCOLCE-207ENST00000486440 ADAMTS12P58397 1594 aa31.46■■■□□ 2.63
PCOLCE-207ENST00000486440 IGF1RP08069 1367 aa31.44■■■□□ 2.62
PCOLCE-207ENST00000486440 SYNJ2O15056 1496 aa31.42■■■□□ 2.62
PCOLCE-207ENST00000486440 FBLN2P98095 1184 aa31.37■■■□□ 2.61
PCOLCE-207ENST00000486440 FHAD1B1AJZ9 1412 aa31.36■■■□□ 2.61
PCOLCE-207ENST00000486440 OSCARQ8IYS5 282 aa31.34■■■□□ 2.61
PCOLCE-207ENST00000486440 CHMP7Q8WUX9 453 aaPredicted RBP31.34■■■□□ 2.61
PCOLCE-207ENST00000486440 CUL7Q14999 1698 aa31.34■■■□□ 2.61
PCOLCE-207ENST00000486440 GRIN2AQ12879 1464 aa31.28■■■□□ 2.6
PCOLCE-207ENST00000486440 DNAJC5Q9H3Z4 198 aa31.26■■■□□ 2.59
PCOLCE-207ENST00000486440 CARMIL1Q5VZK9 1371 aa31.22■■■□□ 2.59
PCOLCE-207ENST00000486440 CEP170Q5SW79 1584 aa31.17■■■□□ 2.58
PCOLCE-207ENST00000486440 CLASP1Q7Z460 1538 aa31.16■■■□□ 2.58
PCOLCE-207ENST00000486440 EEA1Q15075 1411 aa31.15■■■□□ 2.58
PCOLCE-207ENST00000486440 NUP160Q12769 1436 aa31.14■■■□□ 2.58
PCOLCE-207ENST00000486440 CSRNP3Q8WYN3 585 aa31.12■■■□□ 2.57
PCOLCE-207ENST00000486440 PRXQ9BXM0 1461 aa31.09■■■□□ 2.57
PCOLCE-207ENST00000486440 FAM9AQ8IZU1 332 aaPredicted RBP31.09■■■□□ 2.57
PCOLCE-207ENST00000486440 RAPGEF2Q9Y4G8 1499 aa31.08■■■□□ 2.57
PCOLCE-207ENST00000486440 SHROOM2Q13796 1616 aa30.94■■■□□ 2.54
PCOLCE-207ENST00000486440 KIAA0586Q9BVV6 1533 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms