RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 NISCHQ9Y2I1 1504 aa45.93■■■■■ 4.94
RHBDF1-209ENST00000486045 ABCC9O60706 1549 aa41.39■■■■■ 4.22
RHBDF1-209ENST00000486045 CCDC180Q9P1Z9 1646 aa41.15■■■■■ 4.18
RHBDF1-209ENST00000486045 RB1CC1Q8TDY2 1594 aa39.25■■■■□ 3.87
RHBDF1-209ENST00000486045 NACADO15069 1562 aa38.96■■■■□ 3.83
RHBDF1-209ENST00000486045 DNAJC5BQ9UF47 199 aa38.95■■■■□ 3.83
RHBDF1-209ENST00000486045 DCAF8L2P0C7V8 631 aa38.89■■■■□ 3.82
RHBDF1-209ENST00000486045 PABPN1Q86U42 306 aaKnown RBP eCLIP38.57■■■■□ 3.76
RHBDF1-209ENST00000486045 MYO15BQ96JP2 1530 aa38.38■■■■□ 3.74
RHBDF1-209ENST00000486045 UNC13AQ9UPW8 1703 aa38.31■■■■□ 3.72
RHBDF1-209ENST00000486045 BICRAQ9NZM4 1560 aa38.17■■■■□ 3.7
RHBDF1-209ENST00000486045 ZCCHC6Q5VYS8 1495 aaKnown RBP38.05■■■■□ 3.68
RHBDF1-209ENST00000486045 DCAF1Q9Y4B6 1507 aa37.88■■■■□ 3.65
RHBDF1-209ENST00000486045 SCRIBQ14160 1630 aa37.61■■■■□ 3.61
RHBDF1-209ENST00000486045 SHROOM4Q9ULL8 1493 aa37.57■■■■□ 3.6
RHBDF1-209ENST00000486045 CC2D2AQ9P2K1 1620 aa37.32■■■■□ 3.57
RHBDF1-209ENST00000486045 CECR2Q9BXF3 1484 aa37.26■■■■□ 3.56
RHBDF1-209ENST00000486045 EIF4G1Q04637 1599 aaKnown RBP37.23■■■■□ 3.55
RHBDF1-209ENST00000486045 NCAPD3P42695 1498 aa36.02■■■■□ 3.36
RHBDF1-209ENST00000486045 ATAD2BQ9ULI0 1458 aa35.92■■■■□ 3.34
RHBDF1-209ENST00000486045 SMARCA4P51532 1647 aa35.83■■■■□ 3.33
RHBDF1-209ENST00000486045 SMARCA2P51531 1590 aa35.76■■■■□ 3.31
RHBDF1-209ENST00000486045 DNAJC5Q9H3Z4 198 aa35.75■■■■□ 3.31
RHBDF1-209ENST00000486045 HMGXB3Q12766 1538 aa35.72■■■■□ 3.31
RHBDF1-209ENST00000486045 ERCC6Q03468 1493 aa35.71■■■■□ 3.31
RHBDF1-209ENST00000486045 CUX2O14529 1486 aa35.63■■■■□ 3.29
RHBDF1-209ENST00000486045 BAZ1AQ9NRL2 1556 aaPredicted RBP35.63■■■■□ 3.29
RHBDF1-209ENST00000486045 BAZ1BQ9UIG0 1483 aaKnown RBP35.56■■■■□ 3.28
RHBDF1-209ENST00000486045 NESP48681 1621 aa35.54■■■■□ 3.28
RHBDF1-209ENST00000486045 PEG3Q9GZU2 1588 aa35.45■■■■□ 3.27
RHBDF1-209ENST00000486045 MROH2BQ7Z745 1585 aa35.42■■■■□ 3.26
RHBDF1-209ENST00000486045 LAMC3Q9Y6N6 1575 aa35.17■■■■□ 3.22
RHBDF1-209ENST00000486045 THOC2Q8NI27 1593 aaKnown RBP35.13■■■■□ 3.21
RHBDF1-209ENST00000486045 PDS5BQ9NTI5 1447 aa35.01■■■■□ 3.2
RHBDF1-209ENST00000486045 KIF21AQ7Z4S6 1674 aa34.98■■■■□ 3.19
RHBDF1-209ENST00000486045 WIZO95785 1651 aa34.95■■■■□ 3.19
RHBDF1-209ENST00000486045 CADPSQ9ULU8 1353 aa34.94■■■■□ 3.18
RHBDF1-209ENST00000486045 MRC2Q9UBG0 1479 aa34.73■■■■□ 3.15
RHBDF1-209ENST00000486045 RSF1Q96T23 1441 aaPredicted RBP34.67■■■■□ 3.14
RHBDF1-209ENST00000486045 WDR62O43379 1518 aa34.63■■■■□ 3.13
RHBDF1-209ENST00000486045 CEP164Q9UPV0 1460 aa34.58■■■■□ 3.13
RHBDF1-209ENST00000486045 FANCD2Q9BXW9 1451 aa34.55■■■■□ 3.12
RHBDF1-209ENST00000486045 CFTRP13569 1480 aa34.52■■■■□ 3.12
RHBDF1-209ENST00000486045 TOP2AP11388 1531 aaKnown RBP34.5■■■■□ 3.11
RHBDF1-209ENST00000486045 URB2Q14146 1524 aaKnown RBP34.29■■■■□ 3.08
RHBDF1-209ENST00000486045 TRIM41Q8WV44 630 aa34.21■■■■□ 3.07
RHBDF1-209ENST00000486045 CCDC88BA6NC98 1476 aa34.16■■■■□ 3.06
RHBDF1-209ENST00000486045 OSCARQ8IYS5 282 aa34.02■■■■□ 3.04
RHBDF1-209ENST00000486045 PRDM2Q13029 1718 aa34■■■■□ 3.03
RHBDF1-209ENST00000486045 ZNF608Q9ULD9 1512 aaPredicted RBP33.89■■■■□ 3.02
RHBDF1-209ENST00000486045 TOPBP1Q92547 1522 aa33.88■■■■□ 3.01
RHBDF1-209ENST00000486045 IFT140Q96RY7 1462 aa33.88■■■■□ 3.01
RHBDF1-209ENST00000486045 ABCC8Q09428 1581 aa33.72■■■□□ 2.99
RHBDF1-209ENST00000486045 DNMBPQ6XZF7 1577 aa33.72■■■□□ 2.99
RHBDF1-209ENST00000486045 EIF4G3O43432 1585 aaKnown RBP33.64■■■□□ 2.98
RHBDF1-209ENST00000486045 AQRO60306 1485 aaKnown RBP eCLIP33.57■■■□□ 2.973e-7■■□□□ 13.8
RHBDF1-209ENST00000486045 RIMBP3CA6NJZ7 1639 aa33.57■■■□□ 2.96
RHBDF1-209ENST00000486045 RIMBP3BA6NNM3 1639 aa33.57■■■□□ 2.96
RHBDF1-209ENST00000486045 RIMBP3Q9UFD9 1639 aa33.57■■■□□ 2.96
RHBDF1-209ENST00000486045 TARBP1Q13395 1621 aaKnown RBP33.55■■■□□ 2.96
RHBDF1-209ENST00000486045 POLA1P09884 1462 aaPredicted RBP33.54■■■□□ 2.96
RHBDF1-209ENST00000486045 ARHGEF11O15085 1522 aa33.48■■■□□ 2.95
RHBDF1-209ENST00000486045 RAD54L2Q9Y4B4 1467 aa33.45■■■□□ 2.95
RHBDF1-209ENST00000486045 SOGA1O94964 1423 aa33.38■■■□□ 2.93
RHBDF1-209ENST00000486045 FBLN2P98095 1184 aa33.38■■■□□ 2.93
RHBDF1-209ENST00000486045 TDRD9Q8NDG6 1382 aaKnown RBP33.37■■■□□ 2.93
RHBDF1-209ENST00000486045 CHD1O14646 1710 aa33.36■■■□□ 2.93
RHBDF1-209ENST00000486045 FGD5Q6ZNL6 1462 aa33.32■■■□□ 2.92
RHBDF1-209ENST00000486045 CUX1P39880 1505 aa33.28■■■□□ 2.92
RHBDF1-209ENST00000486045 CYB5RLQ6IPT4 315 aa33.28■■■□□ 2.92
RHBDF1-209ENST00000486045 SNAPC4Q5SXM2 1469 aa33.22■■■□□ 2.91
RHBDF1-209ENST00000486045 ARAP1Q96P48 1450 aa33.18■■■□□ 2.9
RHBDF1-209ENST00000486045 WDR97A6NE52 1622 aa33.13■■■□□ 2.89
RHBDF1-209ENST00000486045 SUPT5HO00267 1087 aaKnown RBP33.13■■■□□ 2.89
RHBDF1-209ENST00000486045 CHMP7Q8WUX9 453 aaPredicted RBP33.09■■■□□ 2.89
RHBDF1-209ENST00000486045 GRIN2BQ13224 1484 aa33.08■■■□□ 2.89
RHBDF1-209ENST00000486045 MAGI1Q96QZ7 1491 aaPredicted RBP33.07■■■□□ 2.88
RHBDF1-209ENST00000486045 CLASP1Q7Z460 1538 aa33.03■■■□□ 2.88
RHBDF1-209ENST00000486045 SYNJ2O15056 1496 aa32.99■■■□□ 2.87
RHBDF1-209ENST00000486045 GAPVD1Q14C86 1478 aa32.97■■■□□ 2.87
RHBDF1-209ENST00000486045 SYNJ1O43426 1573 aa32.96■■■□□ 2.87
RHBDF1-209ENST00000486045 TRHP20396 242 aaPredicted RBP32.93■■■□□ 2.86
RHBDF1-209ENST00000486045 ABCA10Q8WWZ4 1543 aa32.92■■■□□ 2.86
RHBDF1-209ENST00000486045 PBRM1Q86U86 1689 aa32.88■■■□□ 2.85
RHBDF1-209ENST00000486045 ABCA5Q8WWZ7 1642 aa32.85■■■□□ 2.85
RHBDF1-209ENST00000486045 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
RHBDF1-209ENST00000486045 TOP2BQ02880 1626 aa32.67■■■□□ 2.82
RHBDF1-209ENST00000486045 GRIN2AQ12879 1464 aa32.67■■■□□ 2.82
RHBDF1-209ENST00000486045 BIVM-ERCC5R4GMW8 1640 aa32.65■■■□□ 2.82
RHBDF1-209ENST00000486045 ADAMTS12P58397 1594 aa32.62■■■□□ 2.81
RHBDF1-209ENST00000486045 NUP160Q12769 1436 aa32.57■■■□□ 2.8
RHBDF1-209ENST00000486045 ERCC6L2Q5T890 1561 aa32.57■■■□□ 2.8
RHBDF1-209ENST00000486045 CEP170Q5SW79 1584 aa32.56■■■□□ 2.8
RHBDF1-209ENST00000486045 FHAD1B1AJZ9 1412 aa32.54■■■□□ 2.8
RHBDF1-209ENST00000486045 ERICH3Q5RHP9 1530 aa32.47■■■□□ 2.79
RHBDF1-209ENST00000486045 SHROOM2Q13796 1616 aa32.37■■■□□ 2.77
RHBDF1-209ENST00000486045 PRG4Q92954 1404 aaPredicted RBP32.27■■■□□ 2.76
RHBDF1-209ENST00000486045 JPH4Q96JJ6 628 aa32.25■■■□□ 2.75
RHBDF1-209ENST00000486045 RUSC2Q8N2Y8 1516 aa32.16■■■□□ 2.74
RHBDF1-209ENST00000486045 IGF1RP08069 1367 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms