RNA–Protein interactions for RNA: ENST00000485804.5

SPIN1-206, Transcript of spindlin 1, humanhuman

TSL 3

Gene SPIN1, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-206ENST00000485804 NISCHQ9Y2I1 1504 aa47.36■■■■■ 5.17
SPIN1-206ENST00000485804 ABCC9O60706 1549 aa42.91■■■■■ 4.46
SPIN1-206ENST00000485804 CCDC180Q9P1Z9 1646 aa42.6■■■■■ 4.41
SPIN1-206ENST00000485804 RB1CC1Q8TDY2 1594 aa40.7■■■■■ 4.11
SPIN1-206ENST00000485804 DNAJC5BQ9UF47 199 aa40.37■■■■■ 4.05
SPIN1-206ENST00000485804 DCAF8L2P0C7V8 631 aa40.35■■■■■ 4.05
SPIN1-206ENST00000485804 NACADO15069 1562 aa40.32■■■■■ 4.05
SPIN1-206ENST00000485804 PABPN1Q86U42 306 aaKnown RBP eCLIP39.96■■■■□ 3.99
SPIN1-206ENST00000485804 UNC13AQ9UPW8 1703 aa39.79■■■■□ 3.96
SPIN1-206ENST00000485804 MYO15BQ96JP2 1530 aa39.6■■■■□ 3.93
SPIN1-206ENST00000485804 BICRAQ9NZM4 1560 aa39.44■■■■□ 3.9
SPIN1-206ENST00000485804 ZCCHC6Q5VYS8 1495 aaKnown RBP39.18■■■■□ 3.86
SPIN1-206ENST00000485804 DCAF1Q9Y4B6 1507 aa39.03■■■■□ 3.84
SPIN1-206ENST00000485804 SCRIBQ14160 1630 aa38.91■■■■□ 3.82
SPIN1-206ENST00000485804 SHROOM4Q9ULL8 1493 aa38.85■■■■□ 3.81
SPIN1-206ENST00000485804 CC2D2AQ9P2K1 1620 aa38.71■■■■□ 3.79
SPIN1-206ENST00000485804 CECR2Q9BXF3 1484 aa38.64■■■■□ 3.78
SPIN1-206ENST00000485804 EIF4G1Q04637 1599 aaKnown RBP38.55■■■■□ 3.76
SPIN1-206ENST00000485804 DNAJC5Q9H3Z4 198 aa37.24■■■■□ 3.55
SPIN1-206ENST00000485804 NCAPD3P42695 1498 aa37.2■■■■□ 3.54
SPIN1-206ENST00000485804 ERCC6Q03468 1493 aa37.11■■■■□ 3.53
SPIN1-206ENST00000485804 ATAD2BQ9ULI0 1458 aa37.08■■■■□ 3.53
SPIN1-206ENST00000485804 SMARCA4P51532 1647 aa37.02■■■■□ 3.52
SPIN1-206ENST00000485804 CUX2O14529 1486 aa37■■■■□ 3.51
SPIN1-206ENST00000485804 SMARCA2P51531 1590 aa37■■■■□ 3.51
SPIN1-206ENST00000485804 HMGXB3Q12766 1538 aa36.91■■■■□ 3.5
SPIN1-206ENST00000485804 BAZ1AQ9NRL2 1556 aaPredicted RBP36.81■■■■□ 3.48
SPIN1-206ENST00000485804 BAZ1BQ9UIG0 1483 aaKnown RBP36.79■■■■□ 3.48
SPIN1-206ENST00000485804 NESP48681 1621 aa36.77■■■■□ 3.48
SPIN1-206ENST00000485804 PEG3Q9GZU2 1588 aa36.57■■■■□ 3.44
SPIN1-206ENST00000485804 MROH2BQ7Z745 1585 aa36.52■■■■□ 3.44
SPIN1-206ENST00000485804 LAMC3Q9Y6N6 1575 aa36.44■■■■□ 3.42
SPIN1-206ENST00000485804 THOC2Q8NI27 1593 aaKnown RBP36.38■■■■□ 3.41
SPIN1-206ENST00000485804 KIF21AQ7Z4S6 1674 aa36.31■■■■□ 3.4
SPIN1-206ENST00000485804 PDS5BQ9NTI5 1447 aa36.28■■■■□ 3.4
SPIN1-206ENST00000485804 WIZO95785 1651 aa36.12■■■■□ 3.37
SPIN1-206ENST00000485804 CADPSQ9ULU8 1353 aa36.11■■■■□ 3.37
SPIN1-206ENST00000485804 MRC2Q9UBG0 1479 aa35.96■■■■□ 3.35
SPIN1-206ENST00000485804 WDR62O43379 1518 aa35.83■■■■□ 3.33
SPIN1-206ENST00000485804 CEP164Q9UPV0 1460 aa35.8■■■■□ 3.32
SPIN1-206ENST00000485804 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
SPIN1-206ENST00000485804 TRIM41Q8WV44 630 aa35.7■■■■□ 3.31
SPIN1-206ENST00000485804 RSF1Q96T23 1441 aaPredicted RBP35.66■■■■□ 3.3
SPIN1-206ENST00000485804 CFTRP13569 1480 aa35.61■■■■□ 3.29
SPIN1-206ENST00000485804 TOP2AP11388 1531 aaKnown RBP35.6■■■■□ 3.29
SPIN1-206ENST00000485804 URB2Q14146 1524 aaKnown RBP35.42■■■■□ 3.26
SPIN1-206ENST00000485804 OSCARQ8IYS5 282 aa35.36■■■■□ 3.25
SPIN1-206ENST00000485804 PRDM2Q13029 1718 aa35.32■■■■□ 3.24
SPIN1-206ENST00000485804 CCDC88BA6NC98 1476 aa35.22■■■■□ 3.23
SPIN1-206ENST00000485804 IFT140Q96RY7 1462 aa35.07■■■■□ 3.2
SPIN1-206ENST00000485804 ZNF608Q9ULD9 1512 aaPredicted RBP35.03■■■■□ 3.2
SPIN1-206ENST00000485804 TOPBP1Q92547 1522 aa35.01■■■■□ 3.2
SPIN1-206ENST00000485804 ABCC8Q09428 1581 aa34.93■■■■□ 3.18
SPIN1-206ENST00000485804 RIMBP3CA6NJZ7 1639 aa34.89■■■■□ 3.18
SPIN1-206ENST00000485804 RIMBP3BA6NNM3 1639 aa34.89■■■■□ 3.18
SPIN1-206ENST00000485804 RIMBP3Q9UFD9 1639 aa34.89■■■■□ 3.18
SPIN1-206ENST00000485804 DNMBPQ6XZF7 1577 aa34.87■■■■□ 3.17
SPIN1-206ENST00000485804 EIF4G3O43432 1585 aaKnown RBP34.84■■■■□ 3.17
SPIN1-206ENST00000485804 ARHGEF11O15085 1522 aa34.73■■■■□ 3.15
SPIN1-206ENST00000485804 AQRO60306 1485 aaKnown RBP eCLIP34.72■■■■□ 3.15
SPIN1-206ENST00000485804 FBLN2P98095 1184 aa34.69■■■■□ 3.14
SPIN1-206ENST00000485804 TARBP1Q13395 1621 aaKnown RBP34.68■■■■□ 3.14
SPIN1-206ENST00000485804 CHD1O14646 1710 aa34.67■■■■□ 3.14
SPIN1-206ENST00000485804 POLA1P09884 1462 aaPredicted RBP34.63■■■■□ 3.13
SPIN1-206ENST00000485804 CYB5RLQ6IPT4 315 aa34.6■■■■□ 3.13
SPIN1-206ENST00000485804 RAD54L2Q9Y4B4 1467 aa34.55■■■■□ 3.12
SPIN1-206ENST00000485804 SOGA1O94964 1423 aa34.53■■■■□ 3.12
SPIN1-206ENST00000485804 TDRD9Q8NDG6 1382 aaKnown RBP34.49■■■■□ 3.11
SPIN1-206ENST00000485804 FGD5Q6ZNL6 1462 aa34.42■■■■□ 3.1
SPIN1-206ENST00000485804 TRHP20396 242 aaPredicted RBP34.37■■■■□ 3.09
SPIN1-206ENST00000485804 SNAPC4Q5SXM2 1469 aa34.37■■■■□ 3.09
SPIN1-206ENST00000485804 ARAP1Q96P48 1450 aa34.36■■■■□ 3.09
SPIN1-206ENST00000485804 CHMP7Q8WUX9 453 aaPredicted RBP34.33■■■■□ 3.09
SPIN1-206ENST00000485804 CUX1P39880 1505 aa34.32■■■■□ 3.08
SPIN1-206ENST00000485804 WDR97A6NE52 1622 aa34.3■■■■□ 3.08
SPIN1-206ENST00000485804 GRIN2BQ13224 1484 aa34.22■■■■□ 3.07
SPIN1-206ENST00000485804 MAGI1Q96QZ7 1491 aaPredicted RBP34.22■■■■□ 3.07
SPIN1-206ENST00000485804 SYNJ1O43426 1573 aa34.21■■■■□ 3.07
SPIN1-206ENST00000485804 CLASP1Q7Z460 1538 aa34.16■■■■□ 3.06
SPIN1-206ENST00000485804 SUPT5HO00267 1087 aaKnown RBP34.15■■■■□ 3.06
SPIN1-206ENST00000485804 SYNJ2O15056 1496 aa34.12■■■■□ 3.05
SPIN1-206ENST00000485804 PBRM1Q86U86 1689 aa34.12■■■■□ 3.05
SPIN1-206ENST00000485804 GAPVD1Q14C86 1478 aa34.09■■■■□ 3.05
SPIN1-206ENST00000485804 ABCA10Q8WWZ4 1543 aa33.96■■■■□ 3.03
SPIN1-206ENST00000485804 ABCA5Q8WWZ7 1642 aa33.93■■■■□ 3.02
SPIN1-206ENST00000485804 WRNQ14191 1432 aaPredicted RBP eCLIP33.84■■■■□ 3.01
SPIN1-206ENST00000485804 GRIN2AQ12879 1464 aa33.77■■■■□ 3
SPIN1-206ENST00000485804 ADAMTS12P58397 1594 aa33.72■■■□□ 2.99
SPIN1-206ENST00000485804 TOP2BQ02880 1626 aa33.71■■■□□ 2.99
SPIN1-206ENST00000485804 BIVM-ERCC5R4GMW8 1640 aa33.71■■■□□ 2.99
SPIN1-206ENST00000485804 ERCC6L2Q5T890 1561 aa33.67■■■□□ 2.98
SPIN1-206ENST00000485804 CEP170Q5SW79 1584 aa33.66■■■□□ 2.98
SPIN1-206ENST00000485804 FHAD1B1AJZ9 1412 aa33.63■■■□□ 2.97
SPIN1-206ENST00000485804 NUP160Q12769 1436 aa33.62■■■□□ 2.97
SPIN1-206ENST00000485804 AEBP2Q6ZN18 517 aaPredicted RBP33.55■■■□□ 2.96
SPIN1-206ENST00000485804 ERICH3Q5RHP9 1530 aa33.54■■■□□ 2.96
SPIN1-206ENST00000485804 SHROOM2Q13796 1616 aa33.49■■■□□ 2.95
SPIN1-206ENST00000485804 PRG4Q92954 1404 aaPredicted RBP33.4■■■□□ 2.94
SPIN1-206ENST00000485804 JPH4Q96JJ6 628 aa33.38■■■□□ 2.93
SPIN1-206ENST00000485804 RUSC2Q8N2Y8 1516 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms