RNA–Protein interactions for RNA: ENST00000485583.1

LRCH4-206, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-206ENST00000485583 NISCHQ9Y2I1 1504 aa45.26■■■■■ 4.84
LRCH4-206ENST00000485583 CCDC180Q9P1Z9 1646 aa40.59■■■■■ 4.09
LRCH4-206ENST00000485583 ABCC9O60706 1549 aa40.48■■■■■ 4.07
LRCH4-206ENST00000485583 RB1CC1Q8TDY2 1594 aa38.58■■■■□ 3.77
LRCH4-206ENST00000485583 NACADO15069 1562 aa38.35■■■■□ 3.73
LRCH4-206ENST00000485583 DCAF8L2P0C7V8 631 aa38.12■■■■□ 3.69
LRCH4-206ENST00000485583 DNAJC5BQ9UF47 199 aa37.93■■■■□ 3.66
LRCH4-206ENST00000485583 MYO15BQ96JP2 1530 aa37.87■■■■□ 3.65
LRCH4-206ENST00000485583 UNC13AQ9UPW8 1703 aa37.75■■■■□ 3.63
LRCH4-206ENST00000485583 PABPN1Q86U42 306 aaKnown RBP eCLIP37.7■■■■□ 3.63
LRCH4-206ENST00000485583 ZCCHC6Q5VYS8 1495 aaKnown RBP37.52■■■■□ 3.6
LRCH4-206ENST00000485583 BICRAQ9NZM4 1560 aa37.47■■■■□ 3.59
LRCH4-206ENST00000485583 DCAF1Q9Y4B6 1507 aa37.4■■■■□ 3.58
LRCH4-206ENST00000485583 SHROOM4Q9ULL8 1493 aa36.97■■■■□ 3.51
LRCH4-206ENST00000485583 SCRIBQ14160 1630 aa36.96■■■■□ 3.51
LRCH4-206ENST00000485583 CC2D2AQ9P2K1 1620 aa36.59■■■■□ 3.45
LRCH4-206ENST00000485583 EIF4G1Q04637 1599 aaKnown RBP36.54■■■■□ 3.44
LRCH4-206ENST00000485583 CECR2Q9BXF3 1484 aa36.47■■■■□ 3.43
LRCH4-206ENST00000485583 NCAPD3P42695 1498 aa35.41■■■■□ 3.26
LRCH4-206ENST00000485583 ATAD2BQ9ULI0 1458 aa35.3■■■■□ 3.24
LRCH4-206ENST00000485583 SMARCA4P51532 1647 aa35.29■■■■□ 3.24
LRCH4-206ENST00000485583 SMARCA2P51531 1590 aa35.2■■■■□ 3.23
LRCH4-206ENST00000485583 HMGXB3Q12766 1538 aa35.15■■■■□ 3.22
LRCH4-206ENST00000485583 BAZ1AQ9NRL2 1556 aaPredicted RBP35.13■■■■□ 3.21
LRCH4-206ENST00000485583 PEG3Q9GZU2 1588 aa34.96■■■■□ 3.19
LRCH4-206ENST00000485583 BAZ1BQ9UIG0 1483 aaKnown RBP34.96■■■■□ 3.19
LRCH4-206ENST00000485583 ERCC6Q03468 1493 aa34.93■■■■□ 3.18
LRCH4-206ENST00000485583 MROH2BQ7Z745 1585 aa34.87■■■■□ 3.17
LRCH4-206ENST00000485583 CUX2O14529 1486 aa34.87■■■■□ 3.17
LRCH4-206ENST00000485583 NESP48681 1621 aa34.81■■■■□ 3.16
LRCH4-206ENST00000485583 DNAJC5Q9H3Z4 198 aa34.76■■■■□ 3.16
LRCH4-206ENST00000485583 LAMC3Q9Y6N6 1575 aa34.59■■■■□ 3.13
LRCH4-206ENST00000485583 WIZO95785 1651 aa34.46■■■■□ 3.11
LRCH4-206ENST00000485583 THOC2Q8NI27 1593 aaKnown RBP34.45■■■■□ 3.11
LRCH4-206ENST00000485583 KIF21AQ7Z4S6 1674 aa34.38■■■■□ 3.09
LRCH4-206ENST00000485583 PDS5BQ9NTI5 1447 aa34.37■■■■□ 3.09
LRCH4-206ENST00000485583 CADPSQ9ULU8 1353 aa34.33■■■■□ 3.09
LRCH4-206ENST00000485583 RSF1Q96T23 1441 aaPredicted RBP34.18■■■■□ 3.06
LRCH4-206ENST00000485583 MRC2Q9UBG0 1479 aa34.07■■■■□ 3.05
LRCH4-206ENST00000485583 TOP2AP11388 1531 aaKnown RBP34.03■■■■□ 3.04
LRCH4-206ENST00000485583 WDR62O43379 1518 aa34■■■■□ 3.03
LRCH4-206ENST00000485583 CFTRP13569 1480 aa33.95■■■■□ 3.03
LRCH4-206ENST00000485583 CEP164Q9UPV0 1460 aa33.95■■■■□ 3.03
LRCH4-206ENST00000485583 FANCD2Q9BXW9 1451 aa33.93■■■■□ 3.02
LRCH4-206ENST00000485583 URB2Q14146 1524 aaKnown RBP33.65■■■□□ 2.98
LRCH4-206ENST00000485583 PRDM2Q13029 1718 aa33.65■■■□□ 2.98
LRCH4-206ENST00000485583 CCDC88BA6NC98 1476 aa33.64■■■□□ 2.98
LRCH4-206ENST00000485583 TOPBP1Q92547 1522 aa33.3■■■□□ 2.92
LRCH4-206ENST00000485583 OSCARQ8IYS5 282 aa33.29■■■□□ 2.92
LRCH4-206ENST00000485583 IFT140Q96RY7 1462 aa33.28■■■□□ 2.92
LRCH4-206ENST00000485583 TRIM41Q8WV44 630 aa33.24■■■□□ 2.91
LRCH4-206ENST00000485583 ABCC8Q09428 1581 aa33.24■■■□□ 2.91
LRCH4-206ENST00000485583 ZNF608Q9ULD9 1512 aaPredicted RBP33.22■■■□□ 2.91
LRCH4-206ENST00000485583 DNMBPQ6XZF7 1577 aa33.19■■■□□ 2.9
LRCH4-206ENST00000485583 EIF4G3O43432 1585 aaKnown RBP33.04■■■□□ 2.88
LRCH4-206ENST00000485583 TARBP1Q13395 1621 aaKnown RBP33.01■■■□□ 2.87
LRCH4-206ENST00000485583 POLA1P09884 1462 aaPredicted RBP32.97■■■□□ 2.87
LRCH4-206ENST00000485583 AQRO60306 1485 aaKnown RBP eCLIP32.93■■■□□ 2.861e-11■■■■■ 50.1
LRCH4-206ENST00000485583 RIMBP3CA6NJZ7 1639 aa32.86■■■□□ 2.85
LRCH4-206ENST00000485583 RIMBP3BA6NNM3 1639 aa32.86■■■□□ 2.85
LRCH4-206ENST00000485583 RIMBP3Q9UFD9 1639 aa32.86■■■□□ 2.85
LRCH4-206ENST00000485583 RAD54L2Q9Y4B4 1467 aa32.84■■■□□ 2.85
LRCH4-206ENST00000485583 SOGA1O94964 1423 aa32.81■■■□□ 2.84
LRCH4-206ENST00000485583 CHD1O14646 1710 aa32.8■■■□□ 2.84
LRCH4-206ENST00000485583 FGD5Q6ZNL6 1462 aa32.77■■■□□ 2.84
LRCH4-206ENST00000485583 ARHGEF11O15085 1522 aa32.76■■■□□ 2.83
LRCH4-206ENST00000485583 CUX1P39880 1505 aa32.76■■■□□ 2.83
LRCH4-206ENST00000485583 TDRD9Q8NDG6 1382 aaKnown RBP32.73■■■□□ 2.83
LRCH4-206ENST00000485583 SUPT5HO00267 1087 aaKnown RBP32.69■■■□□ 2.82
LRCH4-206ENST00000485583 WDR97A6NE52 1622 aa32.68■■■□□ 2.82
LRCH4-206ENST00000485583 FBLN2P98095 1184 aa32.67■■■□□ 2.82
LRCH4-206ENST00000485583 SNAPC4Q5SXM2 1469 aa32.59■■■□□ 2.81
LRCH4-206ENST00000485583 GRIN2BQ13224 1484 aa32.52■■■□□ 2.8
LRCH4-206ENST00000485583 MAGI1Q96QZ7 1491 aaPredicted RBP32.51■■■□□ 2.79
LRCH4-206ENST00000485583 CYB5RLQ6IPT4 315 aa32.49■■■□□ 2.79
LRCH4-206ENST00000485583 CHMP7Q8WUX9 453 aaPredicted RBP32.45■■■□□ 2.79
LRCH4-206ENST00000485583 ARAP1Q96P48 1450 aa32.44■■■□□ 2.78
LRCH4-206ENST00000485583 GAPVD1Q14C86 1478 aa32.42■■■□□ 2.78
LRCH4-206ENST00000485583 CLASP1Q7Z460 1538 aa32.41■■■□□ 2.78
LRCH4-206ENST00000485583 ABCA10Q8WWZ4 1543 aa32.41■■■□□ 2.78
LRCH4-206ENST00000485583 PBRM1Q86U86 1689 aa32.41■■■□□ 2.78
LRCH4-206ENST00000485583 SYNJ2O15056 1496 aa32.41■■■□□ 2.78
LRCH4-206ENST00000485583 SYNJ1O43426 1573 aa32.4■■■□□ 2.78
LRCH4-206ENST00000485583 ABCA5Q8WWZ7 1642 aa32.36■■■□□ 2.77
LRCH4-206ENST00000485583 WRNQ14191 1432 aaPredicted RBP eCLIP32.27■■■□□ 2.76
LRCH4-206ENST00000485583 BIVM-ERCC5R4GMW8 1640 aa32.27■■■□□ 2.76
LRCH4-206ENST00000485583 TOP2BQ02880 1626 aa32.26■■■□□ 2.75
LRCH4-206ENST00000485583 GRIN2AQ12879 1464 aa32.1■■■□□ 2.73
LRCH4-206ENST00000485583 ADAMTS12P58397 1594 aa32.1■■■□□ 2.73
LRCH4-206ENST00000485583 TRHP20396 242 aaPredicted RBP32.09■■■□□ 2.73
LRCH4-206ENST00000485583 FHAD1B1AJZ9 1412 aa32.01■■■□□ 2.72
LRCH4-206ENST00000485583 NUP160Q12769 1436 aa32■■■□□ 2.71
LRCH4-206ENST00000485583 ERICH3Q5RHP9 1530 aa32■■■□□ 2.71
LRCH4-206ENST00000485583 CEP170Q5SW79 1584 aa31.99■■■□□ 2.71
LRCH4-206ENST00000485583 ERCC6L2Q5T890 1561 aa31.92■■■□□ 2.7
LRCH4-206ENST00000485583 SHROOM2Q13796 1616 aa31.86■■■□□ 2.69
LRCH4-206ENST00000485583 PRG4Q92954 1404 aaPredicted RBP31.67■■■□□ 2.66
LRCH4-206ENST00000485583 JPH4Q96JJ6 628 aa31.66■■■□□ 2.66
LRCH4-206ENST00000485583 RUSC2Q8N2Y8 1516 aa31.65■■■□□ 2.66
LRCH4-206ENST00000485583 KIF27Q86VH2 1401 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms