RNA–Protein interactions for RNA: ENST00000485273.1

ARPC4-207, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 2

Gene ARPC4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-207ENST00000485273 NISCHQ9Y2I1 1504 aa40.46■■■■■ 4.07
ARPC4-207ENST00000485273 CCDC180Q9P1Z9 1646 aa35.83■■■■□ 3.33
ARPC4-207ENST00000485273 ABCC9O60706 1549 aa35.04■■■■□ 3.2
ARPC4-207ENST00000485273 DCAF8L2P0C7V8 631 aa33.78■■■■□ 3
ARPC4-207ENST00000485273 ZCCHC6Q5VYS8 1495 aaKnown RBP33.75■■■□□ 2.99
ARPC4-207ENST00000485273 RB1CC1Q8TDY2 1594 aa33.66■■■□□ 2.98
ARPC4-207ENST00000485273 NACADO15069 1562 aa33.65■■■□□ 2.98
ARPC4-207ENST00000485273 MYO15BQ96JP2 1530 aa33.46■■■□□ 2.95
ARPC4-207ENST00000485273 DCAF1Q9Y4B6 1507 aa33.41■■■□□ 2.94
ARPC4-207ENST00000485273 UNC13AQ9UPW8 1703 aa32.97■■■□□ 2.87
ARPC4-207ENST00000485273 SCRIBQ14160 1630 aa32.83■■■□□ 2.85
ARPC4-207ENST00000485273 PABPN1Q86U42 306 aaKnown RBP eCLIP32.79■■■□□ 2.84
ARPC4-207ENST00000485273 BICRAQ9NZM4 1560 aa32.73■■■□□ 2.83
ARPC4-207ENST00000485273 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
ARPC4-207ENST00000485273 DNAJC5BQ9UF47 199 aa32.06■■■□□ 2.72
ARPC4-207ENST00000485273 EIF4G1Q04637 1599 aaKnown RBP31.82■■■□□ 2.68
ARPC4-207ENST00000485273 CC2D2AQ9P2K1 1620 aa31.67■■■□□ 2.66
ARPC4-207ENST00000485273 CECR2Q9BXF3 1484 aa31.58■■■□□ 2.65
ARPC4-207ENST00000485273 SMARCA4P51532 1647 aa31.36■■■□□ 2.61
ARPC4-207ENST00000485273 BAZ1AQ9NRL2 1556 aaPredicted RBP31.31■■■□□ 2.6
ARPC4-207ENST00000485273 MROH2BQ7Z745 1585 aa31.23■■■□□ 2.59
ARPC4-207ENST00000485273 ATAD2BQ9ULI0 1458 aa31.16■■■□□ 2.58
ARPC4-207ENST00000485273 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
ARPC4-207ENST00000485273 SMARCA2P51531 1590 aa31.07■■■□□ 2.56
ARPC4-207ENST00000485273 PEG3Q9GZU2 1588 aa31.01■■■□□ 2.56
ARPC4-207ENST00000485273 HMGXB3Q12766 1538 aa30.93■■■□□ 2.54
ARPC4-207ENST00000485273 RSF1Q96T23 1441 aaPredicted RBP30.91■■■□□ 2.54
ARPC4-207ENST00000485273 WIZO95785 1651 aa30.9■■■□□ 2.54
ARPC4-207ENST00000485273 BAZ1BQ9UIG0 1483 aaKnown RBP30.89■■■□□ 2.54
ARPC4-207ENST00000485273 TOP2AP11388 1531 aaKnown RBP30.53■■■□□ 2.48
ARPC4-207ENST00000485273 NESP48681 1621 aa30.39■■■□□ 2.46
ARPC4-207ENST00000485273 SUPT5HO00267 1087 aaKnown RBP30.28■■■□□ 2.44
ARPC4-207ENST00000485273 LAMC3Q9Y6N6 1575 aa30.21■■■□□ 2.43
ARPC4-207ENST00000485273 CCDC88BA6NC98 1476 aa30.21■■■□□ 2.43
ARPC4-207ENST00000485273 CADPSQ9ULU8 1353 aa30.18■■■□□ 2.42
ARPC4-207ENST00000485273 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
ARPC4-207ENST00000485273 CFTRP13569 1480 aa30.05■■■□□ 2.4
ARPC4-207ENST00000485273 PDS5BQ9NTI5 1447 aa30■■■□□ 2.39
ARPC4-207ENST00000485273 KIF21AQ7Z4S6 1674 aa29.99■■■□□ 2.39
ARPC4-207ENST00000485273 FANCD2Q9BXW9 1451 aa29.87■■■□□ 2.37
ARPC4-207ENST00000485273 THOC2Q8NI27 1593 aaKnown RBP29.85■■■□□ 2.37
ARPC4-207ENST00000485273 CEP164Q9UPV0 1460 aa29.8■■■□□ 2.36
ARPC4-207ENST00000485273 PRDM2Q13029 1718 aa29.79■■■□□ 2.36
ARPC4-207ENST00000485273 MRC2Q9UBG0 1479 aa29.73■■■□□ 2.35
ARPC4-207ENST00000485273 CUX2O14529 1486 aa29.7■■■□□ 2.35
ARPC4-207ENST00000485273 WDR62O43379 1518 aa29.63■■■□□ 2.33
ARPC4-207ENST00000485273 URB2Q14146 1524 aaKnown RBP29.6■■■□□ 2.33
ARPC4-207ENST00000485273 TOPBP1Q92547 1522 aa29.41■■■□□ 2.3
ARPC4-207ENST00000485273 DNMBPQ6XZF7 1577 aa29.37■■■□□ 2.29
ARPC4-207ENST00000485273 ABCC8Q09428 1581 aa29.31■■■□□ 2.28
ARPC4-207ENST00000485273 CUX1P39880 1505 aa29.29■■■□□ 2.28
ARPC4-207ENST00000485273 POLA1P09884 1462 aaPredicted RBP29.18■■■□□ 2.26
ARPC4-207ENST00000485273 FGD5Q6ZNL6 1462 aa29.15■■■□□ 2.26
ARPC4-207ENST00000485273 IFT140Q96RY7 1462 aa29.15■■■□□ 2.26
ARPC4-207ENST00000485273 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
ARPC4-207ENST00000485273 ZNF608Q9ULD9 1512 aaPredicted RBP29.1■■■□□ 2.25
ARPC4-207ENST00000485273 RAD54L2Q9Y4B4 1467 aa29.1■■■□□ 2.25
ARPC4-207ENST00000485273 SYNJ1O43426 1573 aa29.09■■■□□ 2.25
ARPC4-207ENST00000485273 TARBP1Q13395 1621 aaKnown RBP29.09■■■□□ 2.25
ARPC4-207ENST00000485273 SOGA1O94964 1423 aa29.04■■■□□ 2.24
ARPC4-207ENST00000485273 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
ARPC4-207ENST00000485273 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
ARPC4-207ENST00000485273 EIF4G3O43432 1585 aaKnown RBP28.96■■■□□ 2.23
ARPC4-207ENST00000485273 AQRO60306 1485 aaKnown RBP eCLIP28.93■■■□□ 2.223e-6■■■■□ 22.1
ARPC4-207ENST00000485273 TDRD9Q8NDG6 1382 aaKnown RBP28.91■■■□□ 2.22
ARPC4-207ENST00000485273 WDR97A6NE52 1622 aa28.88■■■□□ 2.21
ARPC4-207ENST00000485273 ABCA10Q8WWZ4 1543 aa28.83■■■□□ 2.21
ARPC4-207ENST00000485273 ABCA5Q8WWZ7 1642 aa28.72■■■□□ 2.19
ARPC4-207ENST00000485273 GAPVD1Q14C86 1478 aa28.71■■■□□ 2.19
ARPC4-207ENST00000485273 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
ARPC4-207ENST00000485273 SNAPC4Q5SXM2 1469 aa28.66■■■□□ 2.18
ARPC4-207ENST00000485273 PBRM1Q86U86 1689 aa28.65■■■□□ 2.18
ARPC4-207ENST00000485273 DNAJC5Q9H3Z4 198 aa28.64■■■□□ 2.18
ARPC4-207ENST00000485273 MAGI1Q96QZ7 1491 aaPredicted RBP28.56■■■□□ 2.16
ARPC4-207ENST00000485273 CHD1O14646 1710 aa28.55■■■□□ 2.16
ARPC4-207ENST00000485273 FBLN2P98095 1184 aa28.54■■■□□ 2.16
ARPC4-207ENST00000485273 TRIM41Q8WV44 630 aa28.53■■■□□ 2.16
ARPC4-207ENST00000485273 OSCARQ8IYS5 282 aa28.51■■■□□ 2.15
ARPC4-207ENST00000485273 SYNJ2O15056 1496 aa28.47■■■□□ 2.15
ARPC4-207ENST00000485273 ERICH3Q5RHP9 1530 aa28.47■■■□□ 2.15
ARPC4-207ENST00000485273 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
ARPC4-207ENST00000485273 ADAMTS12P58397 1594 aa28.45■■■□□ 2.14
ARPC4-207ENST00000485273 CHMP7Q8WUX9 453 aaPredicted RBP28.44■■■□□ 2.14
ARPC4-207ENST00000485273 RUSC2Q8N2Y8 1516 aa28.38■■■□□ 2.13
ARPC4-207ENST00000485273 IGF1RP08069 1367 aa28.37■■■□□ 2.13
ARPC4-207ENST00000485273 FHAD1B1AJZ9 1412 aa28.36■■■□□ 2.13
ARPC4-207ENST00000485273 CHIC1Q5VXU3 224 aa28.34■■■□□ 2.13
ARPC4-207ENST00000485273 GRIN2AQ12879 1464 aa28.33■■■□□ 2.13
ARPC4-207ENST00000485273 CLASP1Q7Z460 1538 aa28.24■■■□□ 2.11
ARPC4-207ENST00000485273 CUL7Q14999 1698 aa28.23■■■□□ 2.11
ARPC4-207ENST00000485273 CEP170Q5SW79 1584 aa28.21■■■□□ 2.11
ARPC4-207ENST00000485273 CARMIL1Q5VZK9 1371 aa28.19■■■□□ 2.1
ARPC4-207ENST00000485273 NUP160Q12769 1436 aa28.18■■■□□ 2.1
ARPC4-207ENST00000485273 ARHGEF11O15085 1522 aa28.11■■■□□ 2.09
ARPC4-207ENST00000485273 RIMBP3CA6NJZ7 1639 aa28.1■■■□□ 2.09
ARPC4-207ENST00000485273 RIMBP3BA6NNM3 1639 aa28.1■■■□□ 2.09
ARPC4-207ENST00000485273 RIMBP3Q9UFD9 1639 aa28.1■■■□□ 2.09
ARPC4-207ENST00000485273 FAM9AQ8IZU1 332 aaPredicted RBP28.03■■■□□ 2.08
ARPC4-207ENST00000485273 RAPGEF2Q9Y4G8 1499 aa28.02■■■□□ 2.08
ARPC4-207ENST00000485273 PRXQ9BXM0 1461 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms