RNA–Protein interactions for RNA: ENST00000485261.1

EMD-206, Transcript of emerin, humanhuman

TSL 3

Gene EMD, Length 792 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMD-206ENST00000485261 NISCHQ9Y2I1 1504 aa42.71■■■■■ 4.43
EMD-206ENST00000485261 CCDC180Q9P1Z9 1646 aa38.01■■■■□ 3.67
EMD-206ENST00000485261 ABCC9O60706 1549 aa37.5■■■■□ 3.59
EMD-206ENST00000485261 RB1CC1Q8TDY2 1594 aa35.93■■■■□ 3.34
EMD-206ENST00000485261 NACADO15069 1562 aa35.85■■■■□ 3.33
EMD-206ENST00000485261 DCAF8L2P0C7V8 631 aa35.78■■■■□ 3.32
EMD-206ENST00000485261 MYO15BQ96JP2 1530 aa35.57■■■■□ 3.29
EMD-206ENST00000485261 ZCCHC6Q5VYS8 1495 aaKnown RBP35.51■■■■□ 3.28
EMD-206ENST00000485261 DCAF1Q9Y4B6 1507 aa35.32■■■■□ 3.25
EMD-206ENST00000485261 DNAJC5BQ9UF47 199 aa35.23■■■■□ 3.23
EMD-206ENST00000485261 UNC13AQ9UPW8 1703 aa35.04■■■■□ 3.2
EMD-206ENST00000485261 PABPN1Q86U42 306 aaKnown RBP eCLIP35.04■■■■□ 3.2
EMD-206ENST00000485261 BICRAQ9NZM4 1560 aa34.89■■■■□ 3.18
EMD-206ENST00000485261 SCRIBQ14160 1630 aa34.67■■■■□ 3.14
EMD-206ENST00000485261 SHROOM4Q9ULL8 1493 aa34.49■■■■□ 3.11
EMD-206ENST00000485261 EIF4G1Q04637 1599 aaKnown RBP33.97■■■■□ 3.03
EMD-206ENST00000485261 CC2D2AQ9P2K1 1620 aa33.88■■■■□ 3.01
EMD-206ENST00000485261 CECR2Q9BXF3 1484 aa33.77■■■■□ 3
EMD-206ENST00000485261 SMARCA4P51532 1647 aa33.16■■■□□ 2.9
EMD-206ENST00000485261 NCAPD3P42695 1498 aa33.12■■■□□ 2.89
EMD-206ENST00000485261 BAZ1AQ9NRL2 1556 aaPredicted RBP33.09■■■□□ 2.89
EMD-206ENST00000485261 ATAD2BQ9ULI0 1458 aa33.09■■■□□ 2.89
EMD-206ENST00000485261 SMARCA2P51531 1590 aa33■■■□□ 2.87
EMD-206ENST00000485261 MROH2BQ7Z745 1585 aa32.92■■■□□ 2.86
EMD-206ENST00000485261 HMGXB3Q12766 1538 aa32.89■■■□□ 2.86
EMD-206ENST00000485261 PEG3Q9GZU2 1588 aa32.86■■■□□ 2.85
EMD-206ENST00000485261 BAZ1BQ9UIG0 1483 aaKnown RBP32.77■■■□□ 2.84
EMD-206ENST00000485261 WIZO95785 1651 aa32.5■■■□□ 2.79
EMD-206ENST00000485261 RSF1Q96T23 1441 aaPredicted RBP32.47■■■□□ 2.79
EMD-206ENST00000485261 NESP48681 1621 aa32.39■■■□□ 2.78
EMD-206ENST00000485261 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
EMD-206ENST00000485261 DNAJC5Q9H3Z4 198 aa32.3■■■□□ 2.76
EMD-206ENST00000485261 CUX2O14529 1486 aa32.28■■■□□ 2.76
EMD-206ENST00000485261 LAMC3Q9Y6N6 1575 aa32.23■■■□□ 2.75
EMD-206ENST00000485261 TOP2AP11388 1531 aaKnown RBP32.16■■■□□ 2.74
EMD-206ENST00000485261 CADPSQ9ULU8 1353 aa32.15■■■□□ 2.74
EMD-206ENST00000485261 PDS5BQ9NTI5 1447 aa32.06■■■□□ 2.72
EMD-206ENST00000485261 THOC2Q8NI27 1593 aaKnown RBP31.91■■■□□ 2.7
EMD-206ENST00000485261 KIF21AQ7Z4S6 1674 aa31.91■■■□□ 2.7
EMD-206ENST00000485261 CFTRP13569 1480 aa31.9■■■□□ 2.7
EMD-206ENST00000485261 CCDC88BA6NC98 1476 aa31.82■■■□□ 2.68
EMD-206ENST00000485261 FANCD2Q9BXW9 1451 aa31.75■■■□□ 2.67
EMD-206ENST00000485261 MRC2Q9UBG0 1479 aa31.73■■■□□ 2.67
EMD-206ENST00000485261 CEP164Q9UPV0 1460 aa31.71■■■□□ 2.67
EMD-206ENST00000485261 WDR62O43379 1518 aa31.63■■■□□ 2.65
EMD-206ENST00000485261 PRDM2Q13029 1718 aa31.47■■■□□ 2.63
EMD-206ENST00000485261 URB2Q14146 1524 aaKnown RBP31.46■■■□□ 2.63
EMD-206ENST00000485261 SUPT5HO00267 1087 aaKnown RBP31.42■■■□□ 2.62
EMD-206ENST00000485261 TOPBP1Q92547 1522 aa31.21■■■□□ 2.59
EMD-206ENST00000485261 ABCC8Q09428 1581 aa31.18■■■□□ 2.58
EMD-206ENST00000485261 DNMBPQ6XZF7 1577 aa31.13■■■□□ 2.57
EMD-206ENST00000485261 IFT140Q96RY7 1462 aa31.08■■■□□ 2.57
EMD-206ENST00000485261 ZNF608Q9ULD9 1512 aaPredicted RBP30.98■■■□□ 2.55
EMD-206ENST00000485261 OSCARQ8IYS5 282 aa30.93■■■□□ 2.54
EMD-206ENST00000485261 POLA1P09884 1462 aaPredicted RBP30.93■■■□□ 2.54
EMD-206ENST00000485261 CUX1P39880 1505 aa30.88■■■□□ 2.53
EMD-206ENST00000485261 TARBP1Q13395 1621 aaKnown RBP30.87■■■□□ 2.53
EMD-206ENST00000485261 TRIM41Q8WV44 630 aa30.85■■■□□ 2.53
EMD-206ENST00000485261 RAD54L2Q9Y4B4 1467 aa30.82■■■□□ 2.52
EMD-206ENST00000485261 SOGA1O94964 1423 aa30.81■■■□□ 2.52
EMD-206ENST00000485261 FGD5Q6ZNL6 1462 aa30.81■■■□□ 2.52
EMD-206ENST00000485261 EIF4G3O43432 1585 aaKnown RBP30.78■■■□□ 2.52
EMD-206ENST00000485261 AQRO60306 1485 aaKnown RBP eCLIP30.77■■■□□ 2.521e-22■■■■■ 43.7
EMD-206ENST00000485261 TDRD9Q8NDG6 1382 aaKnown RBP30.68■■■□□ 2.5
EMD-206ENST00000485261 WDR97A6NE52 1622 aa30.59■■■□□ 2.49
EMD-206ENST00000485261 WRNQ14191 1432 aaPredicted RBP eCLIP30.59■■■□□ 2.49
EMD-206ENST00000485261 TOP2BQ02880 1626 aa30.52■■■□□ 2.48
EMD-206ENST00000485261 SYNJ1O43426 1573 aa30.51■■■□□ 2.47
EMD-206ENST00000485261 ABCA10Q8WWZ4 1543 aa30.51■■■□□ 2.47
EMD-206ENST00000485261 BIVM-ERCC5R4GMW8 1640 aa30.5■■■□□ 2.47
EMD-206ENST00000485261 GRIN2BQ13224 1484 aa30.47■■■□□ 2.47
EMD-206ENST00000485261 SNAPC4Q5SXM2 1469 aa30.45■■■□□ 2.47
EMD-206ENST00000485261 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
EMD-206ENST00000485261 FBLN2P98095 1184 aa30.43■■■□□ 2.46
EMD-206ENST00000485261 MAGI1Q96QZ7 1491 aaPredicted RBP30.41■■■□□ 2.46
EMD-206ENST00000485261 CHD1O14646 1710 aa30.4■■■□□ 2.46
EMD-206ENST00000485261 ABCA5Q8WWZ7 1642 aa30.37■■■□□ 2.45
EMD-206ENST00000485261 RIMBP3CA6NJZ7 1639 aa30.35■■■□□ 2.45
EMD-206ENST00000485261 RIMBP3BA6NNM3 1639 aa30.35■■■□□ 2.45
EMD-206ENST00000485261 RIMBP3Q9UFD9 1639 aa30.35■■■□□ 2.45
EMD-206ENST00000485261 CHMP7Q8WUX9 453 aaPredicted RBP30.32■■■□□ 2.44
EMD-206ENST00000485261 ARHGEF11O15085 1522 aa30.31■■■□□ 2.44
EMD-206ENST00000485261 SYNJ2O15056 1496 aa30.3■■■□□ 2.44
EMD-206ENST00000485261 PBRM1Q86U86 1689 aa30.3■■■□□ 2.44
EMD-206ENST00000485261 CYB5RLQ6IPT4 315 aa30.19■■■□□ 2.42
EMD-206ENST00000485261 CLASP1Q7Z460 1538 aa30.15■■■□□ 2.42
EMD-206ENST00000485261 ERICH3Q5RHP9 1530 aa30.12■■■□□ 2.41
EMD-206ENST00000485261 ADAMTS12P58397 1594 aa30.11■■■□□ 2.41
EMD-206ENST00000485261 FHAD1B1AJZ9 1412 aa30.09■■■□□ 2.41
EMD-206ENST00000485261 GRIN2AQ12879 1464 aa30.07■■■□□ 2.4
EMD-206ENST00000485261 ARAP1Q96P48 1450 aa30.03■■■□□ 2.4
EMD-206ENST00000485261 NUP160Q12769 1436 aa29.97■■■□□ 2.39
EMD-206ENST00000485261 KIF27Q86VH2 1401 aa29.97■■■□□ 2.39
EMD-206ENST00000485261 IGF1RP08069 1367 aa29.93■■■□□ 2.38
EMD-206ENST00000485261 CEP170Q5SW79 1584 aa29.92■■■□□ 2.38
EMD-206ENST00000485261 TRHP20396 242 aaPredicted RBP29.8■■■□□ 2.36
EMD-206ENST00000485261 CUL7Q14999 1698 aa29.76■■■□□ 2.35
EMD-206ENST00000485261 SHROOM2Q13796 1616 aa29.73■■■□□ 2.35
EMD-206ENST00000485261 CARMIL1Q5VZK9 1371 aa29.72■■■□□ 2.35
EMD-206ENST00000485261 ERCC6L2Q5T890 1561 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms