RNA–Protein interactions for RNA: ENST00000485213.1

RBM3-206, Transcript of RNA binding motif protein 3, humanhuman

TSL 2

Gene RBM3, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-206ENST00000485213 NISCHQ9Y2I1 1504 aa46.01■■■■■ 4.96
RBM3-206ENST00000485213 CCDC180Q9P1Z9 1646 aa40.99■■■■■ 4.15
RBM3-206ENST00000485213 ABCC9O60706 1549 aa40.48■■■■■ 4.07
RBM3-206ENST00000485213 RB1CC1Q8TDY2 1594 aa38.7■■■■□ 3.79
RBM3-206ENST00000485213 NACADO15069 1562 aa38.59■■■■□ 3.77
RBM3-206ENST00000485213 DCAF8L2P0C7V8 631 aa38.42■■■■□ 3.74
RBM3-206ENST00000485213 ZCCHC6Q5VYS8 1495 aaKnown RBP38.28■■■■□ 3.72
RBM3-206ENST00000485213 MYO15BQ96JP2 1530 aa38.27■■■■□ 3.72
RBM3-206ENST00000485213 DCAF1Q9Y4B6 1507 aa38.01■■■■□ 3.67
RBM3-206ENST00000485213 UNC13AQ9UPW8 1703 aa38■■■■□ 3.67
RBM3-206ENST00000485213 PABPN1Q86U42 306 aaKnown RBP eCLIP37.78■■■■□ 3.64
RBM3-206ENST00000485213 BICRAQ9NZM4 1560 aa37.75■■■■□ 3.63
RBM3-206ENST00000485213 DNAJC5BQ9UF47 199 aa37.61■■■■□ 3.61
RBM3-206ENST00000485213 SCRIBQ14160 1630 aa37.43■■■■□ 3.58
RBM3-206ENST00000485213 SHROOM4Q9ULL8 1493 aa37.07■■■■□ 3.53
RBM3-206ENST00000485213 EIF4G1Q04637 1599 aaKnown RBP36.66■■■■□ 3.46
RBM3-206ENST00000485213 CC2D2AQ9P2K1 1620 aa36.61■■■■□ 3.45
RBM3-206ENST00000485213 CECR2Q9BXF3 1484 aa36.37■■■■□ 3.41
RBM3-206ENST00000485213 SMARCA4P51532 1647 aa35.77■■■■□ 3.32
RBM3-206ENST00000485213 NCAPD3P42695 1498 aa35.67■■■■□ 3.3
RBM3-206ENST00000485213 ATAD2BQ9ULI0 1458 aa35.67■■■■□ 3.3
RBM3-206ENST00000485213 BAZ1AQ9NRL2 1556 aaPredicted RBP35.59■■■■□ 3.29
RBM3-206ENST00000485213 MROH2BQ7Z745 1585 aa35.52■■■■□ 3.28
RBM3-206ENST00000485213 SMARCA2P51531 1590 aa35.5■■■■□ 3.27
RBM3-206ENST00000485213 HMGXB3Q12766 1538 aa35.44■■■■□ 3.26
RBM3-206ENST00000485213 PEG3Q9GZU2 1588 aa35.43■■■■□ 3.26
RBM3-206ENST00000485213 BAZ1BQ9UIG0 1483 aaKnown RBP35.27■■■■□ 3.24
RBM3-206ENST00000485213 WIZO95785 1651 aa35.11■■■■□ 3.21
RBM3-206ENST00000485213 NESP48681 1621 aa35.01■■■■□ 3.19
RBM3-206ENST00000485213 RSF1Q96T23 1441 aaPredicted RBP34.96■■■■□ 3.19
RBM3-206ENST00000485213 ERCC6Q03468 1493 aa34.77■■■■□ 3.16
RBM3-206ENST00000485213 LAMC3Q9Y6N6 1575 aa34.71■■■■□ 3.15
RBM3-206ENST00000485213 TOP2AP11388 1531 aaKnown RBP34.64■■■■□ 3.14
RBM3-206ENST00000485213 CADPSQ9ULU8 1353 aa34.58■■■■□ 3.13
RBM3-206ENST00000485213 CUX2O14529 1486 aa34.57■■■■□ 3.12
RBM3-206ENST00000485213 KIF21AQ7Z4S6 1674 aa34.55■■■■□ 3.12
RBM3-206ENST00000485213 THOC2Q8NI27 1593 aaKnown RBP34.53■■■■□ 3.12
RBM3-206ENST00000485213 PDS5BQ9NTI5 1447 aa34.43■■■■□ 3.1
RBM3-206ENST00000485213 CFTRP13569 1480 aa34.34■■■■□ 3.09
RBM3-206ENST00000485213 CCDC88BA6NC98 1476 aa34.28■■■■□ 3.08
RBM3-206ENST00000485213 FANCD2Q9BXW9 1451 aa34.19■■■■□ 3.06
RBM3-206ENST00000485213 MRC2Q9UBG0 1479 aa34.19■■■■□ 3.06
RBM3-206ENST00000485213 WDR62O43379 1518 aa34.13■■■■□ 3.05
RBM3-206ENST00000485213 CEP164Q9UPV0 1460 aa34.13■■■■□ 3.05
RBM3-206ENST00000485213 PRDM2Q13029 1718 aa34.03■■■■□ 3.04
RBM3-206ENST00000485213 URB2Q14146 1524 aaKnown RBP33.96■■■■□ 3.03
RBM3-206ENST00000485213 DNAJC5Q9H3Z4 198 aa33.96■■■■□ 3.03
RBM3-206ENST00000485213 SUPT5HO00267 1087 aaKnown RBP33.72■■■□□ 2.99
RBM3-206ENST00000485213 TOPBP1Q92547 1522 aa33.65■■■□□ 2.98
RBM3-206ENST00000485213 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
RBM3-206ENST00000485213 ZNF608Q9ULD9 1512 aaPredicted RBP33.46■■■□□ 2.95
RBM3-206ENST00000485213 ABCC8Q09428 1581 aa33.46■■■□□ 2.95
RBM3-206ENST00000485213 IFT140Q96RY7 1462 aa33.44■■■□□ 2.94
RBM3-206ENST00000485213 TARBP1Q13395 1621 aaKnown RBP33.35■■■□□ 2.93
RBM3-206ENST00000485213 POLA1P09884 1462 aaPredicted RBP33.35■■■□□ 2.93
RBM3-206ENST00000485213 CUX1P39880 1505 aa33.33■■■□□ 2.93
RBM3-206ENST00000485213 EIF4G3O43432 1585 aaKnown RBP33.25■■■□□ 2.91
RBM3-206ENST00000485213 RAD54L2Q9Y4B4 1467 aa33.25■■■□□ 2.91
RBM3-206ENST00000485213 FGD5Q6ZNL6 1462 aa33.2■■■□□ 2.91
RBM3-206ENST00000485213 AQRO60306 1485 aaKnown RBP eCLIP33.18■■■□□ 2.92e-11■■■■■ 28.6
RBM3-206ENST00000485213 SOGA1O94964 1423 aa33.13■■■□□ 2.89
RBM3-206ENST00000485213 TDRD9Q8NDG6 1382 aaKnown RBP33.05■■■□□ 2.88
RBM3-206ENST00000485213 OSCARQ8IYS5 282 aa33.04■■■□□ 2.88
RBM3-206ENST00000485213 WDR97A6NE52 1622 aa33.01■■■□□ 2.87
RBM3-206ENST00000485213 SYNJ1O43426 1573 aa32.94■■■□□ 2.86
RBM3-206ENST00000485213 CHD1O14646 1710 aa32.91■■■□□ 2.86
RBM3-206ENST00000485213 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
RBM3-206ENST00000485213 TOP2BQ02880 1626 aa32.88■■■□□ 2.85
RBM3-206ENST00000485213 WRNQ14191 1432 aaPredicted RBP eCLIP32.88■■■□□ 2.85
RBM3-206ENST00000485213 ABCA10Q8WWZ4 1543 aa32.86■■■□□ 2.85
RBM3-206ENST00000485213 SNAPC4Q5SXM2 1469 aa32.83■■■□□ 2.85
RBM3-206ENST00000485213 ABCA5Q8WWZ7 1642 aa32.8■■■□□ 2.84
RBM3-206ENST00000485213 GRIN2BQ13224 1484 aa32.77■■■□□ 2.84
RBM3-206ENST00000485213 GAPVD1Q14C86 1478 aa32.75■■■□□ 2.83
RBM3-206ENST00000485213 PBRM1Q86U86 1689 aa32.75■■■□□ 2.83
RBM3-206ENST00000485213 MAGI1Q96QZ7 1491 aaPredicted RBP32.71■■■□□ 2.83
RBM3-206ENST00000485213 FBLN2P98095 1184 aa32.69■■■□□ 2.82
RBM3-206ENST00000485213 RIMBP3CA6NJZ7 1639 aa32.69■■■□□ 2.82
RBM3-206ENST00000485213 RIMBP3BA6NNM3 1639 aa32.69■■■□□ 2.82
RBM3-206ENST00000485213 RIMBP3Q9UFD9 1639 aa32.69■■■□□ 2.82
RBM3-206ENST00000485213 TRIM41Q8WV44 630 aa32.63■■■□□ 2.81
RBM3-206ENST00000485213 ARHGEF11O15085 1522 aa32.62■■■□□ 2.81
RBM3-206ENST00000485213 SYNJ2O15056 1496 aa32.61■■■□□ 2.81
RBM3-206ENST00000485213 CLASP1Q7Z460 1538 aa32.56■■■□□ 2.8
RBM3-206ENST00000485213 CHMP7Q8WUX9 453 aaPredicted RBP32.54■■■□□ 2.8
RBM3-206ENST00000485213 ADAMTS12P58397 1594 aa32.49■■■□□ 2.79
RBM3-206ENST00000485213 ERICH3Q5RHP9 1530 aa32.41■■■□□ 2.78
RBM3-206ENST00000485213 GRIN2AQ12879 1464 aa32.39■■■□□ 2.78
RBM3-206ENST00000485213 ARAP1Q96P48 1450 aa32.39■■■□□ 2.78
RBM3-206ENST00000485213 FHAD1B1AJZ9 1412 aa32.34■■■□□ 2.77
RBM3-206ENST00000485213 CEP170Q5SW79 1584 aa32.32■■■□□ 2.76
RBM3-206ENST00000485213 NUP160Q12769 1436 aa32.3■■■□□ 2.76
RBM3-206ENST00000485213 CYB5RLQ6IPT4 315 aa32.27■■■□□ 2.76
RBM3-206ENST00000485213 IGF1RP08069 1367 aa32.19■■■□□ 2.74
RBM3-206ENST00000485213 ERCC6L2Q5T890 1561 aa32.18■■■□□ 2.74
RBM3-206ENST00000485213 KIF27Q86VH2 1401 aa32.16■■■□□ 2.74
RBM3-206ENST00000485213 SHROOM2Q13796 1616 aa32.11■■■□□ 2.73
RBM3-206ENST00000485213 CUL7Q14999 1698 aa32.03■■■□□ 2.72
RBM3-206ENST00000485213 RUSC2Q8N2Y8 1516 aa32.02■■■□□ 2.72
RBM3-206ENST00000485213 CARMIL1Q5VZK9 1371 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms