RNA–Protein interactions for RNA: ENST00000485096.5

NCK1-209, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-209ENST00000485096 NISCHQ9Y2I1 1504 aa42■■■■■ 4.31
NCK1-209ENST00000485096 ABCC9O60706 1549 aa38.54■■■■□ 3.76
NCK1-209ENST00000485096 CCDC180Q9P1Z9 1646 aa37.83■■■■□ 3.65
NCK1-209ENST00000485096 DNAJC5BQ9UF47 199 aa36.65■■■■□ 3.46
NCK1-209ENST00000485096 RB1CC1Q8TDY2 1594 aa36.3■■■■□ 3.4
NCK1-209ENST00000485096 NACADO15069 1562 aa35.89■■■■□ 3.34
NCK1-209ENST00000485096 PABPN1Q86U42 306 aaKnown RBP eCLIP35.82■■■■□ 3.32
NCK1-209ENST00000485096 DCAF8L2P0C7V8 631 aa35.76■■■■□ 3.32
NCK1-209ENST00000485096 UNC13AQ9UPW8 1703 aa35.54■■■■□ 3.28
NCK1-209ENST00000485096 BICRAQ9NZM4 1560 aa35.36■■■■□ 3.25
NCK1-209ENST00000485096 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
NCK1-209ENST00000485096 CC2D2AQ9P2K1 1620 aa34.72■■■■□ 3.15
NCK1-209ENST00000485096 ZCCHC6Q5VYS8 1495 aaKnown RBP34.71■■■■□ 3.15
NCK1-209ENST00000485096 CECR2Q9BXF3 1484 aa34.71■■■■□ 3.15
NCK1-209ENST00000485096 SHROOM4Q9ULL8 1493 aa34.64■■■■□ 3.14
NCK1-209ENST00000485096 SCRIBQ14160 1630 aa34.63■■■■□ 3.13
NCK1-209ENST00000485096 DCAF1Q9Y4B6 1507 aa34.55■■■■□ 3.12
NCK1-209ENST00000485096 EIF4G1Q04637 1599 aaKnown RBP34.51■■■■□ 3.12
NCK1-209ENST00000485096 DNAJC5Q9H3Z4 198 aa33.89■■■■□ 3.02
NCK1-209ENST00000485096 CUX2O14529 1486 aa33.28■■■□□ 2.92
NCK1-209ENST00000485096 ERCC6Q03468 1493 aa33.25■■■□□ 2.91
NCK1-209ENST00000485096 NCAPD3P42695 1498 aa33.17■■■□□ 2.9
NCK1-209ENST00000485096 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
NCK1-209ENST00000485096 NESP48681 1621 aa32.99■■■□□ 2.87
NCK1-209ENST00000485096 SMARCA4P51532 1647 aa32.89■■■□□ 2.86
NCK1-209ENST00000485096 HMGXB3Q12766 1538 aa32.88■■■□□ 2.85
NCK1-209ENST00000485096 SMARCA2P51531 1590 aa32.87■■■□□ 2.85
NCK1-209ENST00000485096 BAZ1BQ9UIG0 1483 aaKnown RBP32.71■■■□□ 2.83
NCK1-209ENST00000485096 THOC2Q8NI27 1593 aaKnown RBP32.68■■■□□ 2.82
NCK1-209ENST00000485096 BAZ1AQ9NRL2 1556 aaPredicted RBP32.6■■■□□ 2.81
NCK1-209ENST00000485096 PEG3Q9GZU2 1588 aa32.5■■■□□ 2.79
NCK1-209ENST00000485096 LAMC3Q9Y6N6 1575 aa32.49■■■□□ 2.79
NCK1-209ENST00000485096 KIF21AQ7Z4S6 1674 aa32.47■■■□□ 2.79
NCK1-209ENST00000485096 MROH2BQ7Z745 1585 aa32.43■■■□□ 2.78
NCK1-209ENST00000485096 PDS5BQ9NTI5 1447 aa32.33■■■□□ 2.77
NCK1-209ENST00000485096 TRIM41Q8WV44 630 aa32.32■■■□□ 2.76
NCK1-209ENST00000485096 CADPSQ9ULU8 1353 aa32.16■■■□□ 2.74
NCK1-209ENST00000485096 MRC2Q9UBG0 1479 aa32.15■■■□□ 2.74
NCK1-209ENST00000485096 WDR62O43379 1518 aa32.08■■■□□ 2.73
NCK1-209ENST00000485096 WIZO95785 1651 aa32.01■■■□□ 2.71
NCK1-209ENST00000485096 CEP164Q9UPV0 1460 aa31.91■■■□□ 2.7
NCK1-209ENST00000485096 FANCD2Q9BXW9 1451 aa31.84■■■□□ 2.69
NCK1-209ENST00000485096 CFTRP13569 1480 aa31.69■■■□□ 2.66
NCK1-209ENST00000485096 OSCARQ8IYS5 282 aa31.67■■■□□ 2.66
NCK1-209ENST00000485096 URB2Q14146 1524 aaKnown RBP31.65■■■□□ 2.66
NCK1-209ENST00000485096 RSF1Q96T23 1441 aaPredicted RBP31.52■■■□□ 2.64
NCK1-209ENST00000485096 TOP2AP11388 1531 aaKnown RBP31.51■■■□□ 2.63
NCK1-209ENST00000485096 RIMBP3CA6NJZ7 1639 aa31.42■■■□□ 2.62
NCK1-209ENST00000485096 RIMBP3BA6NNM3 1639 aa31.42■■■□□ 2.62
NCK1-209ENST00000485096 RIMBP3Q9UFD9 1639 aa31.42■■■□□ 2.62
NCK1-209ENST00000485096 ZNF608Q9ULD9 1512 aaPredicted RBP31.39■■■□□ 2.61
NCK1-209ENST00000485096 ARHGEF11O15085 1522 aa31.27■■■□□ 2.6
NCK1-209ENST00000485096 PRDM2Q13029 1718 aa31.27■■■□□ 2.6
NCK1-209ENST00000485096 IFT140Q96RY7 1462 aa31.26■■■□□ 2.59
NCK1-209ENST00000485096 CCDC88BA6NC98 1476 aa31.19■■■□□ 2.58
NCK1-209ENST00000485096 TOPBP1Q92547 1522 aa31.19■■■□□ 2.58
NCK1-209ENST00000485096 EIF4G3O43432 1585 aaKnown RBP31.15■■■□□ 2.58
NCK1-209ENST00000485096 CYB5RLQ6IPT4 315 aa31.06■■■□□ 2.56
NCK1-209ENST00000485096 AQRO60306 1485 aaKnown RBP eCLIP31.01■■■□□ 2.56
NCK1-209ENST00000485096 CHD1O14646 1710 aa31■■■□□ 2.55
NCK1-209ENST00000485096 DNMBPQ6XZF7 1577 aa31■■■□□ 2.55
NCK1-209ENST00000485096 ARAP1Q96P48 1450 aa30.95■■■□□ 2.55
NCK1-209ENST00000485096 TARBP1Q13395 1621 aaKnown RBP30.94■■■□□ 2.54
NCK1-209ENST00000485096 ABCC8Q09428 1581 aa30.92■■■□□ 2.54
NCK1-209ENST00000485096 FBLN2P98095 1184 aa30.91■■■□□ 2.54
NCK1-209ENST00000485096 TRHP20396 242 aaPredicted RBP30.89■■■□□ 2.54
NCK1-209ENST00000485096 POLA1P09884 1462 aaPredicted RBP30.85■■■□□ 2.53
NCK1-209ENST00000485096 RAD54L2Q9Y4B4 1467 aa30.8■■■□□ 2.52
NCK1-209ENST00000485096 TDRD9Q8NDG6 1382 aaKnown RBP30.74■■■□□ 2.51
NCK1-209ENST00000485096 SNAPC4Q5SXM2 1469 aa30.68■■■□□ 2.5
NCK1-209ENST00000485096 SOGA1O94964 1423 aa30.65■■■□□ 2.5
NCK1-209ENST00000485096 CLASP1Q7Z460 1538 aa30.62■■■□□ 2.49
NCK1-209ENST00000485096 FGD5Q6ZNL6 1462 aa30.59■■■□□ 2.49
NCK1-209ENST00000485096 CHMP7Q8WUX9 453 aaPredicted RBP30.51■■■□□ 2.47
NCK1-209ENST00000485096 SYNJ1O43426 1573 aa30.5■■■□□ 2.47
NCK1-209ENST00000485096 CUX1P39880 1505 aa30.49■■■□□ 2.47
NCK1-209ENST00000485096 MAGI1Q96QZ7 1491 aaPredicted RBP30.47■■■□□ 2.47
NCK1-209ENST00000485096 WDR97A6NE52 1622 aa30.44■■■□□ 2.46
NCK1-209ENST00000485096 GRIN2BQ13224 1484 aa30.44■■■□□ 2.46
NCK1-209ENST00000485096 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
NCK1-209ENST00000485096 GAPVD1Q14C86 1478 aa30.32■■■□□ 2.44
NCK1-209ENST00000485096 AEBP2Q6ZN18 517 aaPredicted RBP30.32■■■□□ 2.44
NCK1-209ENST00000485096 PBRM1Q86U86 1689 aa30.31■■■□□ 2.44
NCK1-209ENST00000485096 ERCC6L2Q5T890 1561 aa30.22■■■□□ 2.43
NCK1-209ENST00000485096 ABCA5Q8WWZ7 1642 aa30.19■■■□□ 2.42
NCK1-209ENST00000485096 ABCA10Q8WWZ4 1543 aa30.16■■■□□ 2.42
NCK1-209ENST00000485096 GRIN2AQ12879 1464 aa30.08■■■□□ 2.41
NCK1-209ENST00000485096 CEP170Q5SW79 1584 aa30.05■■■□□ 2.4
NCK1-209ENST00000485096 ADAMTS12P58397 1594 aa30.02■■■□□ 2.4
NCK1-209ENST00000485096 NUP160Q12769 1436 aa29.97■■■□□ 2.39
NCK1-209ENST00000485096 WRNQ14191 1432 aaPredicted RBP eCLIP29.91■■■□□ 2.38
NCK1-209ENST00000485096 SHROOM2Q13796 1616 aa29.89■■■□□ 2.38
NCK1-209ENST00000485096 FHAD1B1AJZ9 1412 aa29.85■■■□□ 2.37
NCK1-209ENST00000485096 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
NCK1-209ENST00000485096 KIF13AQ9H1H9 1805 aa29.8■■■□□ 2.36
NCK1-209ENST00000485096 TOP2BQ02880 1626 aa29.79■■■□□ 2.36
NCK1-209ENST00000485096 BIVM-ERCC5R4GMW8 1640 aa29.79■■■□□ 2.36
NCK1-209ENST00000485096 PRG4Q92954 1404 aaPredicted RBP29.77■■■□□ 2.36
NCK1-209ENST00000485096 ERICH3Q5RHP9 1530 aa29.73■■■□□ 2.35
NCK1-209ENST00000485096 JPH4Q96JJ6 628 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms