RNA–Protein interactions for RNA: ENST00000485064.1

NDUFB4-203, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 1 (best) BASIC

Gene NDUFB4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-203ENST00000485064 NISCHQ9Y2I1 1504 aa25.57■■□□□ 1.68
NDUFB4-203ENST00000485064 ABCC9O60706 1549 aa23.22■■□□□ 1.31
NDUFB4-203ENST00000485064 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
NDUFB4-203ENST00000485064 RB1CC1Q8TDY2 1594 aa21.9■■□□□ 1.1
NDUFB4-203ENST00000485064 DNAJC5BQ9UF47 199 aa21.87■■□□□ 1.09
NDUFB4-203ENST00000485064 DCAF8L2P0C7V8 631 aa21.84■■□□□ 1.09
NDUFB4-203ENST00000485064 NACADO15069 1562 aa21.68■■□□□ 1.06
NDUFB4-203ENST00000485064 PABPN1Q86U42 306 aaKnown RBP eCLIP21.64■■□□□ 1.06
NDUFB4-203ENST00000485064 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
NDUFB4-203ENST00000485064 BICRAQ9NZM4 1560 aa21.33■■□□□ 1.01
NDUFB4-203ENST00000485064 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
NDUFB4-203ENST00000485064 ZCCHC6Q5VYS8 1495 aaKnown RBP21.17■□□□□ 0.98
NDUFB4-203ENST00000485064 SCRIBQ14160 1630 aa21.08■□□□□ 0.97
NDUFB4-203ENST00000485064 DCAF1Q9Y4B6 1507 aa20.98■□□□□ 0.95
NDUFB4-203ENST00000485064 CC2D2AQ9P2K1 1620 aa20.89■□□□□ 0.94
NDUFB4-203ENST00000485064 CECR2Q9BXF3 1484 aa20.84■□□□□ 0.93
NDUFB4-203ENST00000485064 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
NDUFB4-203ENST00000485064 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
NDUFB4-203ENST00000485064 NCAPD3P42695 1498 aa20.02■□□□□ 0.79
NDUFB4-203ENST00000485064 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.79
NDUFB4-203ENST00000485064 DNAJC5Q9H3Z4 198 aa20.01■□□□□ 0.79
NDUFB4-203ENST00000485064 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
NDUFB4-203ENST00000485064 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
NDUFB4-203ENST00000485064 NESP48681 1621 aa19.94■□□□□ 0.78
NDUFB4-203ENST00000485064 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
NDUFB4-203ENST00000485064 HMGXB3Q12766 1538 aa19.87■□□□□ 0.77
NDUFB4-203ENST00000485064 CUX2O14529 1486 aa19.85■□□□□ 0.77
NDUFB4-203ENST00000485064 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
NDUFB4-203ENST00000485064 BAZ1AQ9NRL2 1556 aaPredicted RBP19.82■□□□□ 0.76
NDUFB4-203ENST00000485064 MROH2BQ7Z745 1585 aa19.79■□□□□ 0.76
NDUFB4-203ENST00000485064 PEG3Q9GZU2 1588 aa19.69■□□□□ 0.74
NDUFB4-203ENST00000485064 THOC2Q8NI27 1593 aaKnown RBP19.65■□□□□ 0.74
NDUFB4-203ENST00000485064 KIF21AQ7Z4S6 1674 aa19.64■□□□□ 0.73
NDUFB4-203ENST00000485064 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
NDUFB4-203ENST00000485064 WIZO95785 1651 aa19.58■□□□□ 0.73
NDUFB4-203ENST00000485064 PDS5BQ9NTI5 1447 aa19.49■□□□□ 0.71
NDUFB4-203ENST00000485064 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
NDUFB4-203ENST00000485064 MRC2Q9UBG0 1479 aa19.39■□□□□ 0.69
NDUFB4-203ENST00000485064 WDR62O43379 1518 aa19.31■□□□□ 0.68
NDUFB4-203ENST00000485064 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
NDUFB4-203ENST00000485064 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
NDUFB4-203ENST00000485064 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
NDUFB4-203ENST00000485064 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
NDUFB4-203ENST00000485064 TOP2AP11388 1531 aaKnown RBP19.23■□□□□ 0.67
NDUFB4-203ENST00000485064 CFTRP13569 1480 aa19.2■□□□□ 0.66
NDUFB4-203ENST00000485064 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
NDUFB4-203ENST00000485064 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
NDUFB4-203ENST00000485064 PRDM2Q13029 1718 aa19.01■□□□□ 0.63
NDUFB4-203ENST00000485064 OSCARQ8IYS5 282 aa19■□□□□ 0.63
NDUFB4-203ENST00000485064 ZNF608Q9ULD9 1512 aaPredicted RBP18.98■□□□□ 0.63
NDUFB4-203ENST00000485064 TOPBP1Q92547 1522 aa18.91■□□□□ 0.62
NDUFB4-203ENST00000485064 IFT140Q96RY7 1462 aa18.87■□□□□ 0.61
NDUFB4-203ENST00000485064 RIMBP3CA6NJZ7 1639 aa18.84■□□□□ 0.61
NDUFB4-203ENST00000485064 RIMBP3BA6NNM3 1639 aa18.84■□□□□ 0.61
NDUFB4-203ENST00000485064 RIMBP3Q9UFD9 1639 aa18.84■□□□□ 0.61
NDUFB4-203ENST00000485064 EIF4G3O43432 1585 aaKnown RBP18.82■□□□□ 0.6
NDUFB4-203ENST00000485064 DNMBPQ6XZF7 1577 aa18.8■□□□□ 0.6
NDUFB4-203ENST00000485064 AEBP2Q6ZN18 517 aaPredicted RBP18.79■□□□□ 0.6
NDUFB4-203ENST00000485064 AQRO60306 1485 aaKnown RBP eCLIP18.79■□□□□ 0.6
NDUFB4-203ENST00000485064 CHD1O14646 1710 aa18.74■□□□□ 0.59
NDUFB4-203ENST00000485064 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
NDUFB4-203ENST00000485064 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
NDUFB4-203ENST00000485064 FBLN2P98095 1184 aa18.74■□□□□ 0.59
NDUFB4-203ENST00000485064 RAD54L2Q9Y4B4 1467 aa18.72■□□□□ 0.59
NDUFB4-203ENST00000485064 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
NDUFB4-203ENST00000485064 POLA1P09884 1462 aaPredicted RBP18.71■□□□□ 0.59
NDUFB4-203ENST00000485064 TDRD9Q8NDG6 1382 aaKnown RBP18.67■□□□□ 0.58
NDUFB4-203ENST00000485064 CYB5RLQ6IPT4 315 aa18.66■□□□□ 0.58
NDUFB4-203ENST00000485064 SOGA1O94964 1423 aa18.62■□□□□ 0.57
NDUFB4-203ENST00000485064 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
NDUFB4-203ENST00000485064 CUX1P39880 1505 aa18.59■□□□□ 0.57
NDUFB4-203ENST00000485064 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.56
NDUFB4-203ENST00000485064 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
NDUFB4-203ENST00000485064 SUPT5HO00267 1087 aaKnown RBP18.56■□□□□ 0.56
NDUFB4-203ENST00000485064 TRHP20396 242 aaPredicted RBP18.52■□□□□ 0.56
NDUFB4-203ENST00000485064 CHMP7Q8WUX9 453 aaPredicted RBP18.49■□□□□ 0.55
NDUFB4-203ENST00000485064 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
NDUFB4-203ENST00000485064 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
NDUFB4-203ENST00000485064 GRIN2BQ13224 1484 aa18.44■□□□□ 0.54
NDUFB4-203ENST00000485064 PBRM1Q86U86 1689 aa18.42■□□□□ 0.54
NDUFB4-203ENST00000485064 MAGI1Q96QZ7 1491 aaPredicted RBP18.41■□□□□ 0.54
NDUFB4-203ENST00000485064 SYNJ1O43426 1573 aa18.4■□□□□ 0.54
NDUFB4-203ENST00000485064 GAPVD1Q14C86 1478 aa18.38■□□□□ 0.53
NDUFB4-203ENST00000485064 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
NDUFB4-203ENST00000485064 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
NDUFB4-203ENST00000485064 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
NDUFB4-203ENST00000485064 ERCC6L2Q5T890 1561 aa18.28■□□□□ 0.52
NDUFB4-203ENST00000485064 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
NDUFB4-203ENST00000485064 ADAMTS12P58397 1594 aa18.22■□□□□ 0.51
NDUFB4-203ENST00000485064 GRIN2AQ12879 1464 aa18.22■□□□□ 0.51
NDUFB4-203ENST00000485064 CEP170Q5SW79 1584 aa18.21■□□□□ 0.51
NDUFB4-203ENST00000485064 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
NDUFB4-203ENST00000485064 TOP2BQ02880 1626 aa18.2■□□□□ 0.5
NDUFB4-203ENST00000485064 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
NDUFB4-203ENST00000485064 NUP160Q12769 1436 aa18.12■□□□□ 0.49
NDUFB4-203ENST00000485064 FHAD1B1AJZ9 1412 aa18.12■□□□□ 0.49
NDUFB4-203ENST00000485064 ERICH3Q5RHP9 1530 aa18.06■□□□□ 0.48
NDUFB4-203ENST00000485064 SHROOM2Q13796 1616 aa18.06■□□□□ 0.48
NDUFB4-203ENST00000485064 PRG4Q92954 1404 aaPredicted RBP18.04■□□□□ 0.48
NDUFB4-203ENST00000485064 JPH4Q96JJ6 628 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms