RNA–Protein interactions for RNA: ENST00000484814.1

YIF1A-207, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-207ENST00000484814 NISCHQ9Y2I1 1504 aa53.78■■■■■ 6.2
YIF1A-207ENST00000484814 ABCC9O60706 1549 aa48.53■■■■■ 5.36
YIF1A-207ENST00000484814 CCDC180Q9P1Z9 1646 aa48.41■■■■■ 5.34
YIF1A-207ENST00000484814 RB1CC1Q8TDY2 1594 aa46.12■■■■■ 4.97
YIF1A-207ENST00000484814 DNAJC5BQ9UF47 199 aa45.87■■■■■ 4.93
YIF1A-207ENST00000484814 NACADO15069 1562 aa45.79■■■■■ 4.92
YIF1A-207ENST00000484814 MYO15BQ96JP2 1530 aa45.19■■■■■ 4.82
YIF1A-207ENST00000484814 UNC13AQ9UPW8 1703 aa45.18■■■■■ 4.82
YIF1A-207ENST00000484814 DCAF8L2P0C7V8 631 aa45.11■■■■■ 4.81
YIF1A-207ENST00000484814 PABPN1Q86U42 306 aaKnown RBP eCLIP45.07■■■■■ 4.81
YIF1A-207ENST00000484814 BICRAQ9NZM4 1560 aa44.94■■■■■ 4.79
YIF1A-207ENST00000484814 ZCCHC6Q5VYS8 1495 aaKnown RBP44.54■■■■■ 4.72
YIF1A-207ENST00000484814 DCAF1Q9Y4B6 1507 aa44.49■■■■■ 4.71
YIF1A-207ENST00000484814 SHROOM4Q9ULL8 1493 aa44.29■■■■■ 4.68
YIF1A-207ENST00000484814 SCRIBQ14160 1630 aa43.96■■■■■ 4.63
YIF1A-207ENST00000484814 CC2D2AQ9P2K1 1620 aa43.89■■■■■ 4.62
YIF1A-207ENST00000484814 CECR2Q9BXF3 1484 aa43.77■■■■■ 4.6
YIF1A-207ENST00000484814 EIF4G1Q04637 1599 aaKnown RBP43.76■■■■■ 4.6
YIF1A-207ENST00000484814 NCAPD3P42695 1498 aa42.31■■■■■ 4.36
YIF1A-207ENST00000484814 DNAJC5Q9H3Z4 198 aa42.27■■■■■ 4.36
YIF1A-207ENST00000484814 ATAD2BQ9ULI0 1458 aa42.11■■■■■ 4.33
YIF1A-207ENST00000484814 CUX2O14529 1486 aa42.02■■■■■ 4.32
YIF1A-207ENST00000484814 SMARCA4P51532 1647 aa42■■■■■ 4.31
YIF1A-207ENST00000484814 HMGXB3Q12766 1538 aa41.98■■■■■ 4.31
YIF1A-207ENST00000484814 SMARCA2P51531 1590 aa41.94■■■■■ 4.3
YIF1A-207ENST00000484814 ERCC6Q03468 1493 aa41.83■■■■■ 4.29
YIF1A-207ENST00000484814 BAZ1AQ9NRL2 1556 aaPredicted RBP41.71■■■■■ 4.27
YIF1A-207ENST00000484814 PEG3Q9GZU2 1588 aa41.7■■■■■ 4.27
YIF1A-207ENST00000484814 NESP48681 1621 aa41.67■■■■■ 4.26
YIF1A-207ENST00000484814 BAZ1BQ9UIG0 1483 aaKnown RBP41.6■■■■■ 4.25
YIF1A-207ENST00000484814 MROH2BQ7Z745 1585 aa41.43■■■■■ 4.22
YIF1A-207ENST00000484814 THOC2Q8NI27 1593 aaKnown RBP41.39■■■■■ 4.22
YIF1A-207ENST00000484814 LAMC3Q9Y6N6 1575 aa41.36■■■■■ 4.21
YIF1A-207ENST00000484814 KIF21AQ7Z4S6 1674 aa41.14■■■■■ 4.18
YIF1A-207ENST00000484814 PDS5BQ9NTI5 1447 aa41.04■■■■■ 4.16
YIF1A-207ENST00000484814 CADPSQ9ULU8 1353 aa40.94■■■■■ 4.14
YIF1A-207ENST00000484814 WIZO95785 1651 aa40.88■■■■■ 4.13
YIF1A-207ENST00000484814 MRC2Q9UBG0 1479 aa40.76■■■■■ 4.12
YIF1A-207ENST00000484814 WDR62O43379 1518 aa40.74■■■■■ 4.11
YIF1A-207ENST00000484814 CEP164Q9UPV0 1460 aa40.51■■■■■ 4.07
YIF1A-207ENST00000484814 CFTRP13569 1480 aa40.48■■■■■ 4.07
YIF1A-207ENST00000484814 RSF1Q96T23 1441 aaPredicted RBP40.46■■■■■ 4.07
YIF1A-207ENST00000484814 FANCD2Q9BXW9 1451 aa40.45■■■■■ 4.07
YIF1A-207ENST00000484814 TOP2AP11388 1531 aaKnown RBP40.37■■■■■ 4.05
YIF1A-207ENST00000484814 URB2Q14146 1524 aaKnown RBP40.21■■■■■ 4.03
YIF1A-207ENST00000484814 TRIM41Q8WV44 630 aa40.08■■■■■ 4.01
YIF1A-207ENST00000484814 PRDM2Q13029 1718 aa40.04■■■■■ 4
YIF1A-207ENST00000484814 OSCARQ8IYS5 282 aa39.91■■■■□ 3.98
YIF1A-207ENST00000484814 CCDC88BA6NC98 1476 aa39.88■■■■□ 3.98
YIF1A-207ENST00000484814 IFT140Q96RY7 1462 aa39.74■■■■□ 3.95
YIF1A-207ENST00000484814 ZNF608Q9ULD9 1512 aaPredicted RBP39.73■■■■□ 3.95
YIF1A-207ENST00000484814 TOPBP1Q92547 1522 aa39.7■■■■□ 3.95
YIF1A-207ENST00000484814 RIMBP3CA6NJZ7 1639 aa39.55■■■■□ 3.92
YIF1A-207ENST00000484814 RIMBP3BA6NNM3 1639 aa39.55■■■■□ 3.92
YIF1A-207ENST00000484814 RIMBP3Q9UFD9 1639 aa39.55■■■■□ 3.92
YIF1A-207ENST00000484814 ABCC8Q09428 1581 aa39.55■■■■□ 3.92
YIF1A-207ENST00000484814 DNMBPQ6XZF7 1577 aa39.53■■■■□ 3.92
YIF1A-207ENST00000484814 EIF4G3O43432 1585 aaKnown RBP39.5■■■■□ 3.91
YIF1A-207ENST00000484814 TARBP1Q13395 1621 aaKnown RBP39.43■■■■□ 3.9
YIF1A-207ENST00000484814 ARHGEF11O15085 1522 aa39.4■■■■□ 3.9
YIF1A-207ENST00000484814 POLA1P09884 1462 aaPredicted RBP39.29■■■■□ 3.88
YIF1A-207ENST00000484814 AQRO60306 1485 aaKnown RBP eCLIP39.28■■■■□ 3.882e-8■■■■■ 27.5
YIF1A-207ENST00000484814 CHD1O14646 1710 aa39.24■■■■□ 3.87
YIF1A-207ENST00000484814 RAD54L2Q9Y4B4 1467 aa39.1■■■■□ 3.85
YIF1A-207ENST00000484814 ARAP1Q96P48 1450 aa39.03■■■■□ 3.84
YIF1A-207ENST00000484814 WDR97A6NE52 1622 aa39■■■■□ 3.83
YIF1A-207ENST00000484814 SOGA1O94964 1423 aa39■■■■□ 3.83
YIF1A-207ENST00000484814 TDRD9Q8NDG6 1382 aaKnown RBP38.96■■■■□ 3.83
YIF1A-207ENST00000484814 CYB5RLQ6IPT4 315 aa38.96■■■■□ 3.83
YIF1A-207ENST00000484814 FGD5Q6ZNL6 1462 aa38.96■■■■□ 3.83
YIF1A-207ENST00000484814 CUX1P39880 1505 aa38.94■■■■□ 3.82
YIF1A-207ENST00000484814 SNAPC4Q5SXM2 1469 aa38.88■■■■□ 3.81
YIF1A-207ENST00000484814 CLASP1Q7Z460 1538 aa38.87■■■■□ 3.81
YIF1A-207ENST00000484814 FBLN2P98095 1184 aa38.86■■■■□ 3.81
YIF1A-207ENST00000484814 MAGI1Q96QZ7 1491 aaPredicted RBP38.8■■■■□ 3.8
YIF1A-207ENST00000484814 GRIN2BQ13224 1484 aa38.74■■■■□ 3.79
YIF1A-207ENST00000484814 SYNJ1O43426 1573 aa38.7■■■■□ 3.79
YIF1A-207ENST00000484814 SYNJ2O15056 1496 aa38.66■■■■□ 3.78
YIF1A-207ENST00000484814 CHMP7Q8WUX9 453 aaPredicted RBP38.61■■■■□ 3.77
YIF1A-207ENST00000484814 PBRM1Q86U86 1689 aa38.59■■■■□ 3.77
YIF1A-207ENST00000484814 GAPVD1Q14C86 1478 aa38.56■■■■□ 3.76
YIF1A-207ENST00000484814 ABCA10Q8WWZ4 1543 aa38.56■■■■□ 3.76
YIF1A-207ENST00000484814 ABCA5Q8WWZ7 1642 aa38.56■■■■□ 3.76
YIF1A-207ENST00000484814 TRHP20396 242 aaPredicted RBP38.5■■■■□ 3.75
YIF1A-207ENST00000484814 GRIN2AQ12879 1464 aa38.28■■■■□ 3.72
YIF1A-207ENST00000484814 BIVM-ERCC5R4GMW8 1640 aa38.26■■■■□ 3.71
YIF1A-207ENST00000484814 ADAMTS12P58397 1594 aa38.25■■■■□ 3.71
YIF1A-207ENST00000484814 WRNQ14191 1432 aaPredicted RBP eCLIP38.25■■■■□ 3.71
YIF1A-207ENST00000484814 TOP2BQ02880 1626 aa38.23■■■■□ 3.71
YIF1A-207ENST00000484814 NUP160Q12769 1436 aa38.22■■■■□ 3.71
YIF1A-207ENST00000484814 ERCC6L2Q5T890 1561 aa38.21■■■■□ 3.71
YIF1A-207ENST00000484814 CEP170Q5SW79 1584 aa38.19■■■■□ 3.7
YIF1A-207ENST00000484814 SUPT5HO00267 1087 aaKnown RBP38.17■■■■□ 3.7
YIF1A-207ENST00000484814 SHROOM2Q13796 1616 aa38.12■■■■□ 3.69
YIF1A-207ENST00000484814 FHAD1B1AJZ9 1412 aa38.08■■■■□ 3.69
YIF1A-207ENST00000484814 ERICH3Q5RHP9 1530 aa38.05■■■■□ 3.68
YIF1A-207ENST00000484814 PRG4Q92954 1404 aaPredicted RBP37.75■■■■□ 3.63
YIF1A-207ENST00000484814 RUSC2Q8N2Y8 1516 aa37.73■■■■□ 3.63
YIF1A-207ENST00000484814 KIF13AQ9H1H9 1805 aa37.71■■■■□ 3.63
YIF1A-207ENST00000484814 JPH4Q96JJ6 628 aa37.67■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms