RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
CDK5RAP2-217ENST00000484546 CCDC180Q9P1Z9 1646 aa25.4■■□□□ 1.66
CDK5RAP2-217ENST00000484546 ABCC9O60706 1549 aa24.84■■□□□ 1.57
CDK5RAP2-217ENST00000484546 RB1CC1Q8TDY2 1594 aa23.89■■□□□ 1.41
CDK5RAP2-217ENST00000484546 NACADO15069 1562 aa23.85■■□□□ 1.41
CDK5RAP2-217ENST00000484546 ZCCHC6Q5VYS8 1495 aaKnown RBP23.75■■□□□ 1.39
CDK5RAP2-217ENST00000484546 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.38
CDK5RAP2-217ENST00000484546 MYO15BQ96JP2 1530 aa23.69■■□□□ 1.38
CDK5RAP2-217ENST00000484546 DCAF1Q9Y4B6 1507 aa23.58■■□□□ 1.36
CDK5RAP2-217ENST00000484546 UNC13AQ9UPW8 1703 aa23.39■■□□□ 1.33
CDK5RAP2-217ENST00000484546 BICRAQ9NZM4 1560 aa23.18■■□□□ 1.3
CDK5RAP2-217ENST00000484546 SCRIBQ14160 1630 aa23.16■■□□□ 1.3
CDK5RAP2-217ENST00000484546 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.32e-6■□□□□ 9.6
CDK5RAP2-217ENST00000484546 SHROOM4Q9ULL8 1493 aa22.94■■□□□ 1.26
CDK5RAP2-217ENST00000484546 DNAJC5BQ9UF47 199 aa22.79■■□□□ 1.24
CDK5RAP2-217ENST00000484546 EIF4G1Q04637 1599 aaKnown RBP22.57■■□□□ 1.2
CDK5RAP2-217ENST00000484546 CC2D2AQ9P2K1 1620 aa22.49■■□□□ 1.19
CDK5RAP2-217ENST00000484546 CECR2Q9BXF3 1484 aa22.33■■□□□ 1.16
CDK5RAP2-217ENST00000484546 SMARCA4P51532 1647 aa22.14■■□□□ 1.14
CDK5RAP2-217ENST00000484546 BAZ1AQ9NRL2 1556 aaPredicted RBP22.09■■□□□ 1.13
CDK5RAP2-217ENST00000484546 ATAD2BQ9ULI0 1458 aa22.01■■□□□ 1.11
CDK5RAP2-217ENST00000484546 SMARCA2P51531 1590 aa21.99■■□□□ 1.11
CDK5RAP2-217ENST00000484546 NCAPD3P42695 1498 aa21.98■■□□□ 1.11
CDK5RAP2-217ENST00000484546 MROH2BQ7Z745 1585 aa21.96■■□□□ 1.11
CDK5RAP2-217ENST00000484546 PEG3Q9GZU2 1588 aa21.92■■□□□ 1.1
CDK5RAP2-217ENST00000484546 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
CDK5RAP2-217ENST00000484546 BAZ1BQ9UIG0 1483 aaKnown RBP21.83■■□□□ 1.08
CDK5RAP2-217ENST00000484546 WIZO95785 1651 aa21.72■■□□□ 1.07
CDK5RAP2-217ENST00000484546 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
CDK5RAP2-217ENST00000484546 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
CDK5RAP2-217ENST00000484546 NESP48681 1621 aa21.49■■□□□ 1.03
CDK5RAP2-217ENST00000484546 LAMC3Q9Y6N6 1575 aa21.44■■□□□ 1.02
CDK5RAP2-217ENST00000484546 ERCC6Q03468 1493 aa21.41■■□□□ 1.02
CDK5RAP2-217ENST00000484546 CADPSQ9ULU8 1353 aa21.32■■□□□ 1
CDK5RAP2-217ENST00000484546 KIF21AQ7Z4S6 1674 aa21.27■■□□□ 1
CDK5RAP2-217ENST00000484546 PDS5BQ9NTI5 1447 aa21.25■□□□□ 0.99
CDK5RAP2-217ENST00000484546 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
CDK5RAP2-217ENST00000484546 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
CDK5RAP2-217ENST00000484546 CUX2O14529 1486 aa21.21■□□□□ 0.99
CDK5RAP2-217ENST00000484546 CFTRP13569 1480 aa21.21■□□□□ 0.99
CDK5RAP2-217ENST00000484546 PRDM2Q13029 1718 aa21.12■□□□□ 0.97
CDK5RAP2-217ENST00000484546 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
CDK5RAP2-217ENST00000484546 CEP164Q9UPV0 1460 aa21.09■□□□□ 0.97
CDK5RAP2-217ENST00000484546 MRC2Q9UBG0 1479 aa21.08■□□□□ 0.97
CDK5RAP2-217ENST00000484546 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
CDK5RAP2-217ENST00000484546 WDR62O43379 1518 aa21.04■□□□□ 0.96
CDK5RAP2-217ENST00000484546 URB2Q14146 1524 aaKnown RBP20.92■□□□□ 0.94
CDK5RAP2-217ENST00000484546 TOPBP1Q92547 1522 aa20.78■□□□□ 0.92
CDK5RAP2-217ENST00000484546 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
CDK5RAP2-217ENST00000484546 ABCC8Q09428 1581 aa20.74■□□□□ 0.91
CDK5RAP2-217ENST00000484546 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
CDK5RAP2-217ENST00000484546 CUX1P39880 1505 aa20.62■□□□□ 0.89
CDK5RAP2-217ENST00000484546 POLA1P09884 1462 aaPredicted RBP20.6■□□□□ 0.89
CDK5RAP2-217ENST00000484546 TARBP1Q13395 1621 aaKnown RBP20.57■□□□□ 0.88
CDK5RAP2-217ENST00000484546 ZNF608Q9ULD9 1512 aaPredicted RBP20.57■□□□□ 0.88
CDK5RAP2-217ENST00000484546 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
CDK5RAP2-217ENST00000484546 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
CDK5RAP2-217ENST00000484546 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
CDK5RAP2-217ENST00000484546 EIF4G3O43432 1585 aaKnown RBP20.52■□□□□ 0.88
CDK5RAP2-217ENST00000484546 RAD54L2Q9Y4B4 1467 aa20.5■□□□□ 0.87
CDK5RAP2-217ENST00000484546 SOGA1O94964 1423 aa20.46■□□□□ 0.87
CDK5RAP2-217ENST00000484546 BIVM-ERCC5R4GMW8 1640 aa20.44■□□□□ 0.86
CDK5RAP2-217ENST00000484546 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.86
CDK5RAP2-217ENST00000484546 SYNJ1O43426 1573 aa20.43■□□□□ 0.86
CDK5RAP2-217ENST00000484546 WDR97A6NE52 1622 aa20.43■□□□□ 0.86
CDK5RAP2-217ENST00000484546 TOP2BQ02880 1626 aa20.42■□□□□ 0.86
CDK5RAP2-217ENST00000484546 AQRO60306 1485 aaKnown RBP eCLIP20.42■□□□□ 0.861e-6■■■■□ 19.8
CDK5RAP2-217ENST00000484546 TDRD9Q8NDG6 1382 aaKnown RBP20.35■□□□□ 0.85
CDK5RAP2-217ENST00000484546 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
CDK5RAP2-217ENST00000484546 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
CDK5RAP2-217ENST00000484546 PBRM1Q86U86 1689 aa20.27■□□□□ 0.84
CDK5RAP2-217ENST00000484546 CHD1O14646 1710 aa20.27■□□□□ 0.83
CDK5RAP2-217ENST00000484546 GRIN2BQ13224 1484 aa20.26■□□□□ 0.83
CDK5RAP2-217ENST00000484546 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
CDK5RAP2-217ENST00000484546 GAPVD1Q14C86 1478 aa20.25■□□□□ 0.83
CDK5RAP2-217ENST00000484546 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
CDK5RAP2-217ENST00000484546 MAGI1Q96QZ7 1491 aaPredicted RBP20.23■□□□□ 0.83
CDK5RAP2-217ENST00000484546 SYNJ2O15056 1496 aa20.14■□□□□ 0.81
CDK5RAP2-217ENST00000484546 FBLN2P98095 1184 aa20.12■□□□□ 0.81
CDK5RAP2-217ENST00000484546 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
CDK5RAP2-217ENST00000484546 ERICH3Q5RHP9 1530 aa20.09■□□□□ 0.81
CDK5RAP2-217ENST00000484546 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
CDK5RAP2-217ENST00000484546 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
CDK5RAP2-217ENST00000484546 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.8
CDK5RAP2-217ENST00000484546 RIMBP3CA6NJZ7 1639 aa20.02■□□□□ 0.8
CDK5RAP2-217ENST00000484546 RIMBP3BA6NNM3 1639 aa20.02■□□□□ 0.8
CDK5RAP2-217ENST00000484546 RIMBP3Q9UFD9 1639 aa20.02■□□□□ 0.8
CDK5RAP2-217ENST00000484546 GRIN2AQ12879 1464 aa20.02■□□□□ 0.8
CDK5RAP2-217ENST00000484546 ARHGEF11O15085 1522 aa20.01■□□□□ 0.79
CDK5RAP2-217ENST00000484546 KIF27Q86VH2 1401 aa20■□□□□ 0.79
CDK5RAP2-217ENST00000484546 CEP170Q5SW79 1584 aa19.94■□□□□ 0.78
CDK5RAP2-217ENST00000484546 NUP160Q12769 1436 aa19.93■□□□□ 0.78
CDK5RAP2-217ENST00000484546 CUL7Q14999 1698 aa19.93■□□□□ 0.78
CDK5RAP2-217ENST00000484546 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
CDK5RAP2-217ENST00000484546 IGF1RP08069 1367 aa19.9■□□□□ 0.78
CDK5RAP2-217ENST00000484546 ARAP1Q96P48 1450 aa19.85■□□□□ 0.77
CDK5RAP2-217ENST00000484546 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
CDK5RAP2-217ENST00000484546 SHROOM2Q13796 1616 aa19.81■□□□□ 0.76
CDK5RAP2-217ENST00000484546 CARMIL1Q5VZK9 1371 aa19.79■□□□□ 0.76
CDK5RAP2-217ENST00000484546 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms