RNA–Protein interactions for RNA: ENST00000484396.1

ACSS1-204, Transcript of acyl-CoA synthetase short chain family member 1, humanhuman

TSL 1 (best)

Gene ACSS1, Length 4,767 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS1-204ENST00000484396 MYT1Q01538 1121 aa22.22■■□□□ 1.15
ACSS1-204ENST00000484396 PELP1Q8IZL8 1130 aaKnown RBP22.13■■□□□ 1.13
ACSS1-204ENST00000484396 DCAF8L2P0C7V8 631 aa22.02■■□□□ 1.12
ACSS1-204ENST00000484396 NISCHQ9Y2I1 1504 aa21.73■■□□□ 1.07
ACSS1-204ENST00000484396 TTBK1Q5TCY1 1321 aaPredicted RBP20.7■□□□□ 0.9
ACSS1-204ENST00000484396 SUPT5HO00267 1087 aaKnown RBP20.34■□□□□ 0.85
ACSS1-204ENST00000484396 SHROOM4Q9ULL8 1493 aa20.27■□□□□ 0.84
ACSS1-204ENST00000484396 ERICH6Q7L0X2 663 aa20.19■□□□□ 0.82
ACSS1-204ENST00000484396 CENPBP07199 599 aaPredicted RBP20.03■□□□□ 0.8
ACSS1-204ENST00000484396 HRCP23327 699 aa19.69■□□□□ 0.74
ACSS1-204ENST00000484396 PCGF6Q9BYE7 350 aa19.66■□□□□ 0.74
ACSS1-204ENST00000484396 ZEB1P37275 1124 aaPredicted RBP19.64■□□□□ 0.73
ACSS1-204ENST00000484396 CCER1Q8TC90 406 aaPredicted RBP19.6■□□□□ 0.73
ACSS1-204ENST00000484396 EHMT2Q96KQ7 1210 aa19.47■□□□□ 0.71
ACSS1-204ENST00000484396 FAM9AQ8IZU1 332 aaPredicted RBP19.29■□□□□ 0.68
ACSS1-204ENST00000484396 PPARGC1BQ86YN6 1023 aaKnown RBP19.25■□□□□ 0.67
ACSS1-204ENST00000484396 BCL11AQ9H165 835 aa19.19■□□□□ 0.66
ACSS1-204ENST00000484396 APLP2Q06481 763 aa19.17■□□□□ 0.66
ACSS1-204ENST00000484396 YTHDC1Q96MU7 727 aaKnown RBP19.13■□□□□ 0.65
ACSS1-204ENST00000484396 ABCC9O60706 1549 aa19.11■□□□□ 0.65
ACSS1-204ENST00000484396 GTF3C3Q9Y5Q9 886 aa19.07■□□□□ 0.64
ACSS1-204ENST00000484396 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
ACSS1-204ENST00000484396 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
ACSS1-204ENST00000484396 PRKCSHP14314 528 aaPredicted RBP18.89■□□□□ 0.61
ACSS1-204ENST00000484396 RANGAP1P46060 587 aaPredicted RBP18.88■□□□□ 0.61
ACSS1-204ENST00000484396 NEFLP07196 543 aa18.85■□□□□ 0.61
ACSS1-204ENST00000484396 SLC24A1O60721 1099 aa18.84■□□□□ 0.61
ACSS1-204ENST00000484396 PABPN1Q86U42 306 aaKnown RBP eCLIP18.82■□□□□ 0.6
ACSS1-204ENST00000484396 ACIN1Q9UKV3 1341 aaKnown RBP18.81■□□□□ 0.6
ACSS1-204ENST00000484396 ATP1B4Q9UN42 357 aaPredicted RBP18.77■□□□□ 0.6
ACSS1-204ENST00000484396 GLIPR1L2Q4G1C9 344 aa18.75■□□□□ 0.59
ACSS1-204ENST00000484396 EIF5BO60841 1220 aaKnown RBP18.72■□□□□ 0.59
ACSS1-204ENST00000484396 UBTFP17480 764 aaKnown RBP18.71■□□□□ 0.59
ACSS1-204ENST00000484396 MYT1LQ9UL68 1186 aa18.7■□□□□ 0.58
ACSS1-204ENST00000484396 RTL5Q5HYW3 569 aaPredicted RBP18.65■□□□□ 0.58
ACSS1-204ENST00000484396 ANP32EQ9BTT0 268 aa18.58■□□□□ 0.56
ACSS1-204ENST00000484396 TRIM26Q12899 539 aaPredicted RBP18.52■□□□□ 0.56
ACSS1-204ENST00000484396 DIEXFQ68CQ4 756 aaKnown RBP18.38■□□□□ 0.53
ACSS1-204ENST00000484396 NEUROD1Q13562 356 aa18.38■□□□□ 0.53
ACSS1-204ENST00000484396 CLSPNQ9HAW4 1339 aa18.37■□□□□ 0.53
ACSS1-204ENST00000484396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.33■□□□□ 0.53
ACSS1-204ENST00000484396 HNRNPUL2Q1KMD3 747 aaKnown RBP18.33■□□□□ 0.53
ACSS1-204ENST00000484396 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
ACSS1-204ENST00000484396 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
ACSS1-204ENST00000484396 BCANQ96GW7 911 aa18.16■□□□□ 0.5
ACSS1-204ENST00000484396 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.48
ACSS1-204ENST00000484396 FBLN2P98095 1184 aa18.04■□□□□ 0.48
ACSS1-204ENST00000484396 SCRIBQ14160 1630 aa18.04■□□□□ 0.48
ACSS1-204ENST00000484396 CCDC180Q9P1Z9 1646 aa18.03■□□□□ 0.48
ACSS1-204ENST00000484396 LOC105371045A0A1W2PR82 267 aa18.02■□□□□ 0.48
ACSS1-204ENST00000484396 CDK11AQ9UQ88 783 aaPredicted RBP18■□□□□ 0.47
ACSS1-204ENST00000484396 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
ACSS1-204ENST00000484396 ZNF316A6NFI3 1004 aaPredicted RBP17.94■□□□□ 0.46
ACSS1-204ENST00000484396 ITGAEP38570 1179 aa17.92■□□□□ 0.46
ACSS1-204ENST00000484396 ZCCHC6Q5VYS8 1495 aaKnown RBP17.92■□□□□ 0.46
ACSS1-204ENST00000484396 RTN4Q9NQC3 1192 aaKnown RBP17.91■□□□□ 0.46
ACSS1-204ENST00000484396 NBR1Q14596 966 aa17.87■□□□□ 0.45
ACSS1-204ENST00000484396 CCDC136Q96JN2 1154 aa17.87■□□□□ 0.45
ACSS1-204ENST00000484396 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.87■□□□□ 0.45
ACSS1-204ENST00000484396 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
ACSS1-204ENST00000484396 PKNOX2Q96KN3 472 aa17.8■□□□□ 0.44
ACSS1-204ENST00000484396 ERICH6BQ5W0A0 696 aa17.79■□□□□ 0.44
ACSS1-204ENST00000484396 DEKP35659 375 aaKnown RBP17.74■□□□□ 0.43
ACSS1-204ENST00000484396 ANP32AP39687 249 aaKnown RBP17.74■□□□□ 0.43
ACSS1-204ENST00000484396 ANO8Q9HCE9 1232 aaPredicted RBP17.74■□□□□ 0.43
ACSS1-204ENST00000484396 NACADO15069 1562 aa17.65■□□□□ 0.42
ACSS1-204ENST00000484396 FAM50AQ14320 339 aaKnown RBP17.6■□□□□ 0.41
ACSS1-204ENST00000484396 FKBP8Q14318 412 aa17.6■□□□□ 0.41
ACSS1-204ENST00000484396 A0A0U1RQG5 324 aaPredicted RBP17.58■□□□□ 0.4
ACSS1-204ENST00000484396 NCLP19338 710 aaKnown RBP17.55■□□□□ 0.4
ACSS1-204ENST00000484396 P3H3Q8IVL6 736 aa17.55■□□□□ 0.4
ACSS1-204ENST00000484396 TNNT2P45379 298 aaPredicted RBP17.54■□□□□ 0.4
ACSS1-204ENST00000484396 VSIG10Q8N0Z9 540 aa17.53■□□□□ 0.4
ACSS1-204ENST00000484396 ARID3CA6NKF2 412 aa17.52■□□□□ 0.4
ACSS1-204ENST00000484396 POLR3GLQ9BT43 218 aa17.52■□□□□ 0.4
ACSS1-204ENST00000484396 NPM1P06748 294 aaKnown RBP eCLIP17.5■□□□□ 0.39
ACSS1-204ENST00000484396 TRIM52Q96A61 297 aa17.47■□□□□ 0.39
ACSS1-204ENST00000484396 ZBTB47Q9UFB7 747 aaPredicted RBP17.45■□□□□ 0.38
ACSS1-204ENST00000484396 UBE2Q2Q8WVN8 375 aa17.43■□□□□ 0.38
ACSS1-204ENST00000484396 CHMP7Q8WUX9 453 aaPredicted RBP17.4■□□□□ 0.38
ACSS1-204ENST00000484396 TSHZ2Q9NRE2 1034 aa17.4■□□□□ 0.38
ACSS1-204ENST00000484396 SALL2Q9Y467 1007 aaPredicted RBP17.39■□□□□ 0.37
ACSS1-204ENST00000484396 NEFMP07197 916 aa17.38■□□□□ 0.37
ACSS1-204ENST00000484396 NAP1L5Q96NT1 182 aaPredicted RBP17.37■□□□□ 0.37
ACSS1-204ENST00000484396 SLC4A1APQ9BWU0 796 aaKnown RBP17.36■□□□□ 0.37
ACSS1-204ENST00000484396 SUPT16HQ9Y5B9 1047 aaKnown RBP17.36■□□□□ 0.37
ACSS1-204ENST00000484396 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
ACSS1-204ENST00000484396 CDK11BP21127 795 aaKnown RBP17.35■□□□□ 0.37
ACSS1-204ENST00000484396 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
ACSS1-204ENST00000484396 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
ACSS1-204ENST00000484396 ZNF326Q5BKZ1 582 aaKnown RBP17.33■□□□□ 0.37
ACSS1-204ENST00000484396 PLEKHG5O94827 1062 aa17.31■□□□□ 0.36
ACSS1-204ENST00000484396 RBM19Q9Y4C8 960 aaKnown RBP17.31■□□□□ 0.36
ACSS1-204ENST00000484396 DCAF1Q9Y4B6 1507 aa17.3■□□□□ 0.36
ACSS1-204ENST00000484396 ESF1Q9H501 851 aaKnown RBP17.29■□□□□ 0.36
ACSS1-204ENST00000484396 TRIM44Q96DX7 344 aaPredicted RBP17.29■□□□□ 0.36
ACSS1-204ENST00000484396 ANP32BQ92688 251 aaKnown RBP17.28■□□□□ 0.36
ACSS1-204ENST00000484396 ERCC6Q03468 1493 aa17.27■□□□□ 0.35
ACSS1-204ENST00000484396 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
ACSS1-204ENST00000484396 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms