RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 NISCHQ9Y2I1 1504 aa29.45■■■□□ 2.31
SNRNP200-206ENST00000484372 CCDC180Q9P1Z9 1646 aa26.36■■□□□ 1.81
SNRNP200-206ENST00000484372 ABCC9O60706 1549 aa26.23■■□□□ 1.79
SNRNP200-206ENST00000484372 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
SNRNP200-206ENST00000484372 NACADO15069 1562 aa24.93■■□□□ 1.58
SNRNP200-206ENST00000484372 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
SNRNP200-206ENST00000484372 MYO15BQ96JP2 1530 aa24.63■■□□□ 1.53
SNRNP200-206ENST00000484372 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.519e-10■■■■□ 19.5
SNRNP200-206ENST00000484372 ZCCHC6Q5VYS8 1495 aaKnown RBP24.43■■□□□ 1.5
SNRNP200-206ENST00000484372 DNAJC5BQ9UF47 199 aa24.41■■□□□ 1.5
SNRNP200-206ENST00000484372 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
SNRNP200-206ENST00000484372 UNC13AQ9UPW8 1703 aa24.35■■□□□ 1.49
SNRNP200-206ENST00000484372 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
SNRNP200-206ENST00000484372 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
SNRNP200-206ENST00000484372 SCRIBQ14160 1630 aa24.01■■□□□ 1.43
SNRNP200-206ENST00000484372 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
SNRNP200-206ENST00000484372 EIF4G1Q04637 1599 aaKnown RBP23.67■■□□□ 1.38
SNRNP200-206ENST00000484372 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
SNRNP200-206ENST00000484372 NCAPD3P42695 1498 aa23■■□□□ 1.27
SNRNP200-206ENST00000484372 ATAD2BQ9ULI0 1458 aa22.93■■□□□ 1.26
SNRNP200-206ENST00000484372 SMARCA4P51532 1647 aa22.93■■□□□ 1.26
SNRNP200-206ENST00000484372 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
SNRNP200-206ENST00000484372 BAZ1AQ9NRL2 1556 aaPredicted RBP22.89■■□□□ 1.25
SNRNP200-206ENST00000484372 HMGXB3Q12766 1538 aa22.83■■□□□ 1.25
SNRNP200-206ENST00000484372 BAZ1BQ9UIG0 1483 aaKnown RBP22.76■■□□□ 1.23
SNRNP200-206ENST00000484372 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
SNRNP200-206ENST00000484372 PEG3Q9GZU2 1588 aa22.7■■□□□ 1.22
SNRNP200-206ENST00000484372 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
SNRNP200-206ENST00000484372 CUX2O14529 1486 aa22.58■■□□□ 1.2
SNRNP200-206ENST00000484372 NESP48681 1621 aa22.53■■□□□ 1.2
SNRNP200-206ENST00000484372 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
SNRNP200-206ENST00000484372 DNAJC5Q9H3Z4 198 aa22.4■■□□□ 1.18
SNRNP200-206ENST00000484372 WIZO95785 1651 aa22.39■■□□□ 1.17
SNRNP200-206ENST00000484372 PDS5BQ9NTI5 1447 aa22.39■■□□□ 1.17
SNRNP200-206ENST00000484372 CADPSQ9ULU8 1353 aa22.34■■□□□ 1.17
SNRNP200-206ENST00000484372 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
SNRNP200-206ENST00000484372 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
SNRNP200-206ENST00000484372 KIF21AQ7Z4S6 1674 aa22.23■■□□□ 1.15
SNRNP200-206ENST00000484372 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
SNRNP200-206ENST00000484372 MRC2Q9UBG0 1479 aa22.13■■□□□ 1.13
SNRNP200-206ENST00000484372 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
SNRNP200-206ENST00000484372 CFTRP13569 1480 aa22.08■■□□□ 1.12
SNRNP200-206ENST00000484372 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
SNRNP200-206ENST00000484372 WDR62O43379 1518 aa22.03■■□□□ 1.12
SNRNP200-206ENST00000484372 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
SNRNP200-206ENST00000484372 PRDM2Q13029 1718 aa21.82■■□□□ 1.08
SNRNP200-206ENST00000484372 URB2Q14146 1524 aaKnown RBP21.81■■□□□ 1.08
SNRNP200-206ENST00000484372 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
SNRNP200-206ENST00000484372 IFT140Q96RY7 1462 aa21.65■■□□□ 1.06
SNRNP200-206ENST00000484372 OSCARQ8IYS5 282 aa21.64■■□□□ 1.05
SNRNP200-206ENST00000484372 TOPBP1Q92547 1522 aa21.64■■□□□ 1.05
SNRNP200-206ENST00000484372 DNMBPQ6XZF7 1577 aa21.58■■□□□ 1.05
SNRNP200-206ENST00000484372 ZNF608Q9ULD9 1512 aaPredicted RBP21.52■■□□□ 1.04
SNRNP200-206ENST00000484372 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
SNRNP200-206ENST00000484372 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
SNRNP200-206ENST00000484372 POLA1P09884 1462 aaPredicted RBP21.43■■□□□ 1.02
SNRNP200-206ENST00000484372 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
SNRNP200-206ENST00000484372 TARBP1Q13395 1621 aaKnown RBP21.39■■□□□ 1.01
SNRNP200-206ENST00000484372 AQRO60306 1485 aaKnown RBP eCLIP21.39■■□□□ 1.016e-13■■■■■ 31.4
SNRNP200-206ENST00000484372 SOGA1O94964 1423 aa21.38■■□□□ 1.01
SNRNP200-206ENST00000484372 RAD54L2Q9Y4B4 1467 aa21.33■■□□□ 1.01
SNRNP200-206ENST00000484372 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
SNRNP200-206ENST00000484372 FBLN2P98095 1184 aa21.31■■□□□ 1
SNRNP200-206ENST00000484372 TDRD9Q8NDG6 1382 aaKnown RBP21.29■■□□□ 1
SNRNP200-206ENST00000484372 CUX1P39880 1505 aa21.29■■□□□ 1
SNRNP200-206ENST00000484372 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
SNRNP200-206ENST00000484372 RIMBP3CA6NJZ7 1639 aa21.21■□□□□ 0.99
SNRNP200-206ENST00000484372 RIMBP3BA6NNM3 1639 aa21.21■□□□□ 0.99
SNRNP200-206ENST00000484372 RIMBP3Q9UFD9 1639 aa21.21■□□□□ 0.99
SNRNP200-206ENST00000484372 CHD1O14646 1710 aa21.21■□□□□ 0.99
SNRNP200-206ENST00000484372 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
SNRNP200-206ENST00000484372 ARHGEF11O15085 1522 aa21.19■□□□□ 0.98
SNRNP200-206ENST00000484372 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
SNRNP200-206ENST00000484372 SNAPC4Q5SXM2 1469 aa21.18■□□□□ 0.98
SNRNP200-206ENST00000484372 MAGI1Q96QZ7 1491 aaPredicted RBP21.16■□□□□ 0.98
SNRNP200-206ENST00000484372 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
SNRNP200-206ENST00000484372 CYB5RLQ6IPT4 315 aa21.1■□□□□ 0.97
SNRNP200-206ENST00000484372 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
SNRNP200-206ENST00000484372 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
SNRNP200-206ENST00000484372 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
SNRNP200-206ENST00000484372 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
SNRNP200-206ENST00000484372 PBRM1Q86U86 1689 aa21.02■□□□□ 0.95
SNRNP200-206ENST00000484372 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
SNRNP200-206ENST00000484372 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
SNRNP200-206ENST00000484372 BIVM-ERCC5R4GMW8 1640 aa20.99■□□□□ 0.95
SNRNP200-206ENST00000484372 CLASP1Q7Z460 1538 aa20.98■□□□□ 0.95
SNRNP200-206ENST00000484372 ARAP1Q96P48 1450 aa20.97■□□□□ 0.95
SNRNP200-206ENST00000484372 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
SNRNP200-206ENST00000484372 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
SNRNP200-206ENST00000484372 TRHP20396 242 aaPredicted RBP20.86■□□□□ 0.93
SNRNP200-206ENST00000484372 ADAMTS12P58397 1594 aa20.85■□□□□ 0.93
SNRNP200-206ENST00000484372 ERICH3Q5RHP9 1530 aa20.84■□□□□ 0.93
SNRNP200-206ENST00000484372 NUP160Q12769 1436 aa20.78■□□□□ 0.92
SNRNP200-206ENST00000484372 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
SNRNP200-206ENST00000484372 KIF27Q86VH2 1401 aa20.69■□□□□ 0.9
SNRNP200-206ENST00000484372 JPH4Q96JJ6 628 aa20.65■□□□□ 0.9
SNRNP200-206ENST00000484372 SHROOM2Q13796 1616 aa20.64■□□□□ 0.89
SNRNP200-206ENST00000484372 ERCC6L2Q5T890 1561 aa20.63■□□□□ 0.89
SNRNP200-206ENST00000484372 IGF1RP08069 1367 aa20.61■□□□□ 0.89
SNRNP200-206ENST00000484372 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms