RNA–Protein interactions for RNA: ENST00000484284.5

ACAA1-217, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 2

Gene ACAA1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-217ENST00000484284 NISCHQ9Y2I1 1504 aa44.64■■■■■ 4.74
ACAA1-217ENST00000484284 CCDC180Q9P1Z9 1646 aa39.8■■■■□ 3.96
ACAA1-217ENST00000484284 ABCC9O60706 1549 aa39.78■■■■□ 3.96
ACAA1-217ENST00000484284 RB1CC1Q8TDY2 1594 aa37.88■■■■□ 3.65
ACAA1-217ENST00000484284 DCAF8L2P0C7V8 631 aa37.79■■■■□ 3.64
ACAA1-217ENST00000484284 NACADO15069 1562 aa37.68■■■■□ 3.62
ACAA1-217ENST00000484284 MYO15BQ96JP2 1530 aa37.24■■■■□ 3.55
ACAA1-217ENST00000484284 PABPN1Q86U42 306 aaKnown RBP eCLIP37.16■■■■□ 3.54
ACAA1-217ENST00000484284 DNAJC5BQ9UF47 199 aa37.16■■■■□ 3.54
ACAA1-217ENST00000484284 ZCCHC6Q5VYS8 1495 aaKnown RBP37.02■■■■□ 3.52
ACAA1-217ENST00000484284 DCAF1Q9Y4B6 1507 aa36.85■■■■□ 3.49
ACAA1-217ENST00000484284 UNC13AQ9UPW8 1703 aa36.8■■■■□ 3.48
ACAA1-217ENST00000484284 BICRAQ9NZM4 1560 aa36.74■■■■□ 3.47
ACAA1-217ENST00000484284 SCRIBQ14160 1630 aa36.39■■■■□ 3.42
ACAA1-217ENST00000484284 SHROOM4Q9ULL8 1493 aa36.29■■■■□ 3.4
ACAA1-217ENST00000484284 EIF4G1Q04637 1599 aaKnown RBP35.85■■■■□ 3.33
ACAA1-217ENST00000484284 CC2D2AQ9P2K1 1620 aa35.84■■■■□ 3.33
ACAA1-217ENST00000484284 CECR2Q9BXF3 1484 aa35.8■■■■□ 3.32
ACAA1-217ENST00000484284 NCAPD3P42695 1498 aa34.85■■■■□ 3.17
ACAA1-217ENST00000484284 ATAD2BQ9ULI0 1458 aa34.78■■■■□ 3.16
ACAA1-217ENST00000484284 SMARCA4P51532 1647 aa34.7■■■■□ 3.15
ACAA1-217ENST00000484284 SMARCA2P51531 1590 aa34.64■■■■□ 3.14
ACAA1-217ENST00000484284 BAZ1AQ9NRL2 1556 aaPredicted RBP34.62■■■■□ 3.13
ACAA1-217ENST00000484284 HMGXB3Q12766 1538 aa34.53■■■■□ 3.12
ACAA1-217ENST00000484284 BAZ1BQ9UIG0 1483 aaKnown RBP34.45■■■■□ 3.1
ACAA1-217ENST00000484284 MROH2BQ7Z745 1585 aa34.4■■■■□ 3.1
ACAA1-217ENST00000484284 PEG3Q9GZU2 1588 aa34.36■■■■□ 3.09
ACAA1-217ENST00000484284 ERCC6Q03468 1493 aa34.33■■■■□ 3.09
ACAA1-217ENST00000484284 NESP48681 1621 aa34.21■■■■□ 3.07
ACAA1-217ENST00000484284 CUX2O14529 1486 aa34.14■■■■□ 3.06
ACAA1-217ENST00000484284 DNAJC5Q9H3Z4 198 aa33.96■■■■□ 3.03
ACAA1-217ENST00000484284 LAMC3Q9Y6N6 1575 aa33.94■■■■□ 3.02
ACAA1-217ENST00000484284 WIZO95785 1651 aa33.93■■■■□ 3.02
ACAA1-217ENST00000484284 PDS5BQ9NTI5 1447 aa33.85■■■■□ 3.01
ACAA1-217ENST00000484284 CADPSQ9ULU8 1353 aa33.84■■■■□ 3.01
ACAA1-217ENST00000484284 RSF1Q96T23 1441 aaPredicted RBP33.83■■■■□ 3.01
ACAA1-217ENST00000484284 THOC2Q8NI27 1593 aaKnown RBP33.7■■■□□ 2.99
ACAA1-217ENST00000484284 KIF21AQ7Z4S6 1674 aa33.61■■■□□ 2.97
ACAA1-217ENST00000484284 TOP2AP11388 1531 aaKnown RBP33.56■■■□□ 2.96
ACAA1-217ENST00000484284 MRC2Q9UBG0 1479 aa33.5■■■□□ 2.95
ACAA1-217ENST00000484284 CFTRP13569 1480 aa33.46■■■□□ 2.95
ACAA1-217ENST00000484284 FANCD2Q9BXW9 1451 aa33.43■■■□□ 2.94
ACAA1-217ENST00000484284 CEP164Q9UPV0 1460 aa33.42■■■□□ 2.94
ACAA1-217ENST00000484284 WDR62O43379 1518 aa33.36■■■□□ 2.93
ACAA1-217ENST00000484284 CCDC88BA6NC98 1476 aa33.25■■■□□ 2.91
ACAA1-217ENST00000484284 URB2Q14146 1524 aaKnown RBP33.1■■■□□ 2.89
ACAA1-217ENST00000484284 PRDM2Q13029 1718 aa32.85■■■□□ 2.85
ACAA1-217ENST00000484284 TOPBP1Q92547 1522 aa32.79■■■□□ 2.84
ACAA1-217ENST00000484284 IFT140Q96RY7 1462 aa32.76■■■□□ 2.84
ACAA1-217ENST00000484284 OSCARQ8IYS5 282 aa32.75■■■□□ 2.83
ACAA1-217ENST00000484284 ABCC8Q09428 1581 aa32.75■■■□□ 2.83
ACAA1-217ENST00000484284 ZNF608Q9ULD9 1512 aaPredicted RBP32.68■■■□□ 2.82
ACAA1-217ENST00000484284 DNMBPQ6XZF7 1577 aa32.65■■■□□ 2.82
ACAA1-217ENST00000484284 SUPT5HO00267 1087 aaKnown RBP32.63■■■□□ 2.81
ACAA1-217ENST00000484284 TRIM41Q8WV44 630 aa32.61■■■□□ 2.81
ACAA1-217ENST00000484284 POLA1P09884 1462 aaPredicted RBP32.48■■■□□ 2.79
ACAA1-217ENST00000484284 AQRO60306 1485 aaKnown RBP eCLIP32.45■■■□□ 2.791e-6■■■■■ 38.1
ACAA1-217ENST00000484284 EIF4G3O43432 1585 aaKnown RBP32.41■■■□□ 2.78
ACAA1-217ENST00000484284 TARBP1Q13395 1621 aaKnown RBP32.4■■■□□ 2.78
ACAA1-217ENST00000484284 SOGA1O94964 1423 aa32.4■■■□□ 2.78
ACAA1-217ENST00000484284 RAD54L2Q9Y4B4 1467 aa32.39■■■□□ 2.78
ACAA1-217ENST00000484284 TDRD9Q8NDG6 1382 aaKnown RBP32.33■■■□□ 2.77
ACAA1-217ENST00000484284 FGD5Q6ZNL6 1462 aa32.31■■■□□ 2.76
ACAA1-217ENST00000484284 CUX1P39880 1505 aa32.3■■■□□ 2.76
ACAA1-217ENST00000484284 FBLN2P98095 1184 aa32.28■■■□□ 2.76
ACAA1-217ENST00000484284 RIMBP3CA6NJZ7 1639 aa32.1■■■□□ 2.73
ACAA1-217ENST00000484284 RIMBP3BA6NNM3 1639 aa32.1■■■□□ 2.73
ACAA1-217ENST00000484284 RIMBP3Q9UFD9 1639 aa32.1■■■□□ 2.73
ACAA1-217ENST00000484284 ARHGEF11O15085 1522 aa32.09■■■□□ 2.73
ACAA1-217ENST00000484284 SNAPC4Q5SXM2 1469 aa32.09■■■□□ 2.73
ACAA1-217ENST00000484284 WDR97A6NE52 1622 aa32.07■■■□□ 2.72
ACAA1-217ENST00000484284 CHMP7Q8WUX9 453 aaPredicted RBP32.06■■■□□ 2.72
ACAA1-217ENST00000484284 GRIN2BQ13224 1484 aa32.05■■■□□ 2.72
ACAA1-217ENST00000484284 CHD1O14646 1710 aa32.05■■■□□ 2.72
ACAA1-217ENST00000484284 MAGI1Q96QZ7 1491 aaPredicted RBP31.99■■■□□ 2.71
ACAA1-217ENST00000484284 CYB5RLQ6IPT4 315 aa31.98■■■□□ 2.71
ACAA1-217ENST00000484284 GAPVD1Q14C86 1478 aa31.97■■■□□ 2.71
ACAA1-217ENST00000484284 ABCA10Q8WWZ4 1543 aa31.95■■■□□ 2.7
ACAA1-217ENST00000484284 WRNQ14191 1432 aaPredicted RBP eCLIP31.93■■■□□ 2.7
ACAA1-217ENST00000484284 SYNJ2O15056 1496 aa31.91■■■□□ 2.7
ACAA1-217ENST00000484284 SYNJ1O43426 1573 aa31.81■■■□□ 2.68
ACAA1-217ENST00000484284 ARAP1Q96P48 1450 aa31.8■■■□□ 2.68
ACAA1-217ENST00000484284 TOP2BQ02880 1626 aa31.8■■■□□ 2.68
ACAA1-217ENST00000484284 CLASP1Q7Z460 1538 aa31.8■■■□□ 2.68
ACAA1-217ENST00000484284 ABCA5Q8WWZ7 1642 aa31.79■■■□□ 2.68
ACAA1-217ENST00000484284 PBRM1Q86U86 1689 aa31.75■■■□□ 2.67
ACAA1-217ENST00000484284 BIVM-ERCC5R4GMW8 1640 aa31.75■■■□□ 2.67
ACAA1-217ENST00000484284 GRIN2AQ12879 1464 aa31.62■■■□□ 2.65
ACAA1-217ENST00000484284 FHAD1B1AJZ9 1412 aa31.59■■■□□ 2.65
ACAA1-217ENST00000484284 TRHP20396 242 aaPredicted RBP31.57■■■□□ 2.64
ACAA1-217ENST00000484284 ADAMTS12P58397 1594 aa31.56■■■□□ 2.64
ACAA1-217ENST00000484284 ERICH3Q5RHP9 1530 aa31.53■■■□□ 2.64
ACAA1-217ENST00000484284 NUP160Q12769 1436 aa31.5■■■□□ 2.63
ACAA1-217ENST00000484284 CEP170Q5SW79 1584 aa31.44■■■□□ 2.62
ACAA1-217ENST00000484284 ERCC6L2Q5T890 1561 aa31.34■■■□□ 2.61
ACAA1-217ENST00000484284 KIF27Q86VH2 1401 aa31.32■■■□□ 2.6
ACAA1-217ENST00000484284 IGF1RP08069 1367 aa31.3■■■□□ 2.6
ACAA1-217ENST00000484284 JPH4Q96JJ6 628 aa31.29■■■□□ 2.6
ACAA1-217ENST00000484284 PRG4Q92954 1404 aaPredicted RBP31.24■■■□□ 2.59
ACAA1-217ENST00000484284 SHROOM2Q13796 1616 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms