RNA–Protein interactions for RNA: ENST00000484245.1

GADD45A-204, Transcript of growth arrest and DNA damage inducible alpha, humanhuman

TSL 1 (best)

Gene GADD45A, Length 688 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45A-204ENST00000484245 NISCHQ9Y2I1 1504 aa53.42■■■■■ 6.14
GADD45A-204ENST00000484245 ABCC9O60706 1549 aa48.02■■■■■ 5.28
GADD45A-204ENST00000484245 CCDC180Q9P1Z9 1646 aa47.99■■■■■ 5.27
GADD45A-204ENST00000484245 RB1CC1Q8TDY2 1594 aa45.7■■■■■ 4.91
GADD45A-204ENST00000484245 NACADO15069 1562 aa45.37■■■■■ 4.85
GADD45A-204ENST00000484245 DCAF8L2P0C7V8 631 aa45.12■■■■■ 4.81
GADD45A-204ENST00000484245 DNAJC5BQ9UF47 199 aa45.1■■■■■ 4.81
GADD45A-204ENST00000484245 UNC13AQ9UPW8 1703 aa44.75■■■■■ 4.75
GADD45A-204ENST00000484245 MYO15BQ96JP2 1530 aa44.7■■■■■ 4.75
GADD45A-204ENST00000484245 PABPN1Q86U42 306 aaKnown RBP eCLIP44.69■■■■■ 4.74
GADD45A-204ENST00000484245 BICRAQ9NZM4 1560 aa44.39■■■■■ 4.7
GADD45A-204ENST00000484245 ZCCHC6Q5VYS8 1495 aaKnown RBP44.26■■■■■ 4.68
GADD45A-204ENST00000484245 DCAF1Q9Y4B6 1507 aa44.12■■■■■ 4.65
GADD45A-204ENST00000484245 SHROOM4Q9ULL8 1493 aa43.73■■■■■ 4.59
GADD45A-204ENST00000484245 SCRIBQ14160 1630 aa43.72■■■■■ 4.59
GADD45A-204ENST00000484245 CC2D2AQ9P2K1 1620 aa43.4■■■■■ 4.54
GADD45A-204ENST00000484245 EIF4G1Q04637 1599 aaKnown RBP43.28■■■■■ 4.52
GADD45A-204ENST00000484245 CECR2Q9BXF3 1484 aa43.25■■■■■ 4.51
GADD45A-204ENST00000484245 NCAPD3P42695 1498 aa41.86■■■■■ 4.29
GADD45A-204ENST00000484245 ATAD2BQ9ULI0 1458 aa41.73■■■■■ 4.27
GADD45A-204ENST00000484245 SMARCA4P51532 1647 aa41.71■■■■■ 4.27
GADD45A-204ENST00000484245 SMARCA2P51531 1590 aa41.63■■■■■ 4.25
GADD45A-204ENST00000484245 HMGXB3Q12766 1538 aa41.56■■■■■ 4.24
GADD45A-204ENST00000484245 BAZ1AQ9NRL2 1556 aaPredicted RBP41.47■■■■■ 4.23
GADD45A-204ENST00000484245 ERCC6Q03468 1493 aa41.46■■■■■ 4.23
GADD45A-204ENST00000484245 DNAJC5Q9H3Z4 198 aa41.44■■■■■ 4.22
GADD45A-204ENST00000484245 CUX2O14529 1486 aa41.4■■■■■ 4.22
GADD45A-204ENST00000484245 BAZ1BQ9UIG0 1483 aaKnown RBP41.33■■■■■ 4.21
GADD45A-204ENST00000484245 PEG3Q9GZU2 1588 aa41.29■■■■■ 4.2
GADD45A-204ENST00000484245 NESP48681 1621 aa41.25■■■■■ 4.19
GADD45A-204ENST00000484245 MROH2BQ7Z745 1585 aa41.17■■■■■ 4.18
GADD45A-204ENST00000484245 LAMC3Q9Y6N6 1575 aa40.95■■■■■ 4.15
GADD45A-204ENST00000484245 THOC2Q8NI27 1593 aaKnown RBP40.85■■■■■ 4.13
GADD45A-204ENST00000484245 KIF21AQ7Z4S6 1674 aa40.76■■■■■ 4.12
GADD45A-204ENST00000484245 WIZO95785 1651 aa40.71■■■■■ 4.11
GADD45A-204ENST00000484245 PDS5BQ9NTI5 1447 aa40.69■■■■■ 4.1
GADD45A-204ENST00000484245 CADPSQ9ULU8 1353 aa40.59■■■■■ 4.09
GADD45A-204ENST00000484245 MRC2Q9UBG0 1479 aa40.35■■■■■ 4.05
GADD45A-204ENST00000484245 RSF1Q96T23 1441 aaPredicted RBP40.29■■■■■ 4.04
GADD45A-204ENST00000484245 WDR62O43379 1518 aa40.26■■■■■ 4.04
GADD45A-204ENST00000484245 CEP164Q9UPV0 1460 aa40.19■■■■■ 4.02
GADD45A-204ENST00000484245 TOP2AP11388 1531 aaKnown RBP40.16■■■■■ 4.02
GADD45A-204ENST00000484245 FANCD2Q9BXW9 1451 aa40.13■■■■■ 4.02
GADD45A-204ENST00000484245 CFTRP13569 1480 aa40.12■■■■■ 4.01
GADD45A-204ENST00000484245 URB2Q14146 1524 aaKnown RBP39.82■■■■□ 3.97
GADD45A-204ENST00000484245 PRDM2Q13029 1718 aa39.81■■■■□ 3.96
GADD45A-204ENST00000484245 CCDC88BA6NC98 1476 aa39.7■■■■□ 3.95
GADD45A-204ENST00000484245 TRIM41Q8WV44 630 aa39.61■■■■□ 3.93
GADD45A-204ENST00000484245 OSCARQ8IYS5 282 aa39.5■■■■□ 3.91
GADD45A-204ENST00000484245 IFT140Q96RY7 1462 aa39.38■■■■□ 3.9
GADD45A-204ENST00000484245 TOPBP1Q92547 1522 aa39.38■■■■□ 3.89
GADD45A-204ENST00000484245 ZNF608Q9ULD9 1512 aaPredicted RBP39.34■■■■□ 3.89
GADD45A-204ENST00000484245 ABCC8Q09428 1581 aa39.29■■■■□ 3.88
GADD45A-204ENST00000484245 DNMBPQ6XZF7 1577 aa39.24■■■■□ 3.87
GADD45A-204ENST00000484245 EIF4G3O43432 1585 aaKnown RBP39.13■■■■□ 3.85
GADD45A-204ENST00000484245 TARBP1Q13395 1621 aaKnown RBP39.06■■■■□ 3.84
GADD45A-204ENST00000484245 RIMBP3CA6NJZ7 1639 aa39.03■■■■□ 3.84
GADD45A-204ENST00000484245 RIMBP3BA6NNM3 1639 aa39.03■■■■□ 3.84
GADD45A-204ENST00000484245 RIMBP3Q9UFD9 1639 aa39.03■■■■□ 3.84
GADD45A-204ENST00000484245 AQRO60306 1485 aaKnown RBP eCLIP38.97■■■■□ 3.832e-9■■■■□ 19.4
GADD45A-204ENST00000484245 POLA1P09884 1462 aaPredicted RBP38.97■■■■□ 3.83
GADD45A-204ENST00000484245 CHD1O14646 1710 aa38.9■■■■□ 3.82
GADD45A-204ENST00000484245 ARHGEF11O15085 1522 aa38.88■■■■□ 3.81
GADD45A-204ENST00000484245 RAD54L2Q9Y4B4 1467 aa38.84■■■■□ 3.81
GADD45A-204ENST00000484245 SUPT5HO00267 1087 aaKnown RBP38.83■■■■□ 3.81
GADD45A-204ENST00000484245 SOGA1O94964 1423 aa38.79■■■■□ 3.8
GADD45A-204ENST00000484245 FGD5Q6ZNL6 1462 aa38.73■■■■□ 3.79
GADD45A-204ENST00000484245 TDRD9Q8NDG6 1382 aaKnown RBP38.72■■■■□ 3.79
GADD45A-204ENST00000484245 FBLN2P98095 1184 aa38.72■■■■□ 3.79
GADD45A-204ENST00000484245 CUX1P39880 1505 aa38.68■■■■□ 3.78
GADD45A-204ENST00000484245 WDR97A6NE52 1622 aa38.63■■■■□ 3.78
GADD45A-204ENST00000484245 CYB5RLQ6IPT4 315 aa38.59■■■■□ 3.77
GADD45A-204ENST00000484245 SNAPC4Q5SXM2 1469 aa38.57■■■■□ 3.76
GADD45A-204ENST00000484245 ARAP1Q96P48 1450 aa38.49■■■■□ 3.75
GADD45A-204ENST00000484245 GRIN2BQ13224 1484 aa38.46■■■■□ 3.75
GADD45A-204ENST00000484245 MAGI1Q96QZ7 1491 aaPredicted RBP38.46■■■■□ 3.75
GADD45A-204ENST00000484245 CHMP7Q8WUX9 453 aaPredicted RBP38.43■■■■□ 3.74
GADD45A-204ENST00000484245 CLASP1Q7Z460 1538 aa38.39■■■■□ 3.74
GADD45A-204ENST00000484245 SYNJ1O43426 1573 aa38.37■■■■□ 3.73
GADD45A-204ENST00000484245 PBRM1Q86U86 1689 aa38.36■■■■□ 3.73
GADD45A-204ENST00000484245 SYNJ2O15056 1496 aa38.34■■■■□ 3.73
GADD45A-204ENST00000484245 GAPVD1Q14C86 1478 aa38.32■■■■□ 3.72
GADD45A-204ENST00000484245 ABCA10Q8WWZ4 1543 aa38.28■■■■□ 3.72
GADD45A-204ENST00000484245 ABCA5Q8WWZ7 1642 aa38.24■■■■□ 3.71
GADD45A-204ENST00000484245 TRHP20396 242 aaPredicted RBP38.18■■■■□ 3.7
GADD45A-204ENST00000484245 WRNQ14191 1432 aaPredicted RBP eCLIP38.1■■■■□ 3.69
GADD45A-204ENST00000484245 BIVM-ERCC5R4GMW8 1640 aa38.08■■■■□ 3.69
GADD45A-204ENST00000484245 TOP2BQ02880 1626 aa38.06■■■■□ 3.68
GADD45A-204ENST00000484245 GRIN2AQ12879 1464 aa37.96■■■■□ 3.67
GADD45A-204ENST00000484245 ADAMTS12P58397 1594 aa37.96■■■■□ 3.67
GADD45A-204ENST00000484245 CEP170Q5SW79 1584 aa37.85■■■■□ 3.65
GADD45A-204ENST00000484245 NUP160Q12769 1436 aa37.83■■■■□ 3.65
GADD45A-204ENST00000484245 FHAD1B1AJZ9 1412 aa37.82■■■■□ 3.64
GADD45A-204ENST00000484245 ERCC6L2Q5T890 1561 aa37.81■■■■□ 3.64
GADD45A-204ENST00000484245 ERICH3Q5RHP9 1530 aa37.8■■■■□ 3.64
GADD45A-204ENST00000484245 SHROOM2Q13796 1616 aa37.71■■■■□ 3.63
GADD45A-204ENST00000484245 PRG4Q92954 1404 aaPredicted RBP37.48■■■■□ 3.59
GADD45A-204ENST00000484245 JPH4Q96JJ6 628 aa37.45■■■■□ 3.59
GADD45A-204ENST00000484245 RUSC2Q8N2Y8 1516 aa37.42■■■■□ 3.58
GADD45A-204ENST00000484245 IGF1RP08069 1367 aa37.29■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms