RNA–Protein interactions for RNA: ENST00000483663.5

NPRL3-209, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 3

Gene NPRL3, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-209ENST00000483663 NISCHQ9Y2I1 1504 aa31.6■■■□□ 2.65
NPRL3-209ENST00000483663 CCDC180Q9P1Z9 1646 aa28.15■■■□□ 2.1
NPRL3-209ENST00000483663 ABCC9O60706 1549 aa27.62■■■□□ 2.01
NPRL3-209ENST00000483663 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
NPRL3-209ENST00000483663 NACADO15069 1562 aa26.47■■□□□ 1.83
NPRL3-209ENST00000483663 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
NPRL3-209ENST00000483663 ZCCHC6Q5VYS8 1495 aaKnown RBP26.33■■□□□ 1.81
NPRL3-209ENST00000483663 MYO15BQ96JP2 1530 aa26.3■■□□□ 1.8
NPRL3-209ENST00000483663 DCAF1Q9Y4B6 1507 aa26.15■■□□□ 1.78
NPRL3-209ENST00000483663 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
NPRL3-209ENST00000483663 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
NPRL3-209ENST00000483663 PABPN1Q86U42 306 aaKnown RBP eCLIP25.77■■□□□ 1.72
NPRL3-209ENST00000483663 SCRIBQ14160 1630 aa25.67■■□□□ 1.7
NPRL3-209ENST00000483663 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
NPRL3-209ENST00000483663 DNAJC5BQ9UF47 199 aa25.47■■□□□ 1.67
NPRL3-209ENST00000483663 EIF4G1Q04637 1599 aaKnown RBP25.09■■□□□ 1.61
NPRL3-209ENST00000483663 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
NPRL3-209ENST00000483663 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
NPRL3-209ENST00000483663 SMARCA4P51532 1647 aa24.56■■□□□ 1.52
NPRL3-209ENST00000483663 BAZ1AQ9NRL2 1556 aaPredicted RBP24.49■■□□□ 1.51
NPRL3-209ENST00000483663 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.5
NPRL3-209ENST00000483663 NCAPD3P42695 1498 aa24.44■■□□□ 1.5
NPRL3-209ENST00000483663 SMARCA2P51531 1590 aa24.38■■□□□ 1.49
NPRL3-209ENST00000483663 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
NPRL3-209ENST00000483663 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.49
NPRL3-209ENST00000483663 HMGXB3Q12766 1538 aa24.32■■□□□ 1.48
NPRL3-209ENST00000483663 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
NPRL3-209ENST00000483663 WIZO95785 1651 aa24.09■■□□□ 1.45
NPRL3-209ENST00000483663 RSF1Q96T23 1441 aaPredicted RBP24.04■■□□□ 1.44
NPRL3-209ENST00000483663 NESP48681 1621 aa23.9■■□□□ 1.42
NPRL3-209ENST00000483663 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
NPRL3-209ENST00000483663 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
NPRL3-209ENST00000483663 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
NPRL3-209ENST00000483663 CADPSQ9ULU8 1353 aa23.7■■□□□ 1.38
NPRL3-209ENST00000483663 KIF21AQ7Z4S6 1674 aa23.62■■□□□ 1.37
NPRL3-209ENST00000483663 PDS5BQ9NTI5 1447 aa23.61■■□□□ 1.37
NPRL3-209ENST00000483663 CUX2O14529 1486 aa23.61■■□□□ 1.37
NPRL3-209ENST00000483663 THOC2Q8NI27 1593 aaKnown RBP23.59■■□□□ 1.37
NPRL3-209ENST00000483663 CFTRP13569 1480 aa23.56■■□□□ 1.36
NPRL3-209ENST00000483663 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
NPRL3-209ENST00000483663 FANCD2Q9BXW9 1451 aa23.44■■□□□ 1.34
NPRL3-209ENST00000483663 MRC2Q9UBG0 1479 aa23.42■■□□□ 1.34
NPRL3-209ENST00000483663 CEP164Q9UPV0 1460 aa23.42■■□□□ 1.34
NPRL3-209ENST00000483663 PRDM2Q13029 1718 aa23.38■■□□□ 1.33
NPRL3-209ENST00000483663 WDR62O43379 1518 aa23.37■■□□□ 1.33
NPRL3-209ENST00000483663 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
NPRL3-209ENST00000483663 URB2Q14146 1524 aaKnown RBP23.24■■□□□ 1.31
NPRL3-209ENST00000483663 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
NPRL3-209ENST00000483663 DNMBPQ6XZF7 1577 aa23.03■■□□□ 1.28
NPRL3-209ENST00000483663 ABCC8Q09428 1581 aa23.01■■□□□ 1.27
NPRL3-209ENST00000483663 DNAJC5Q9H3Z4 198 aa22.98■■□□□ 1.27
NPRL3-209ENST00000483663 IFT140Q96RY7 1462 aa22.93■■□□□ 1.26
NPRL3-209ENST00000483663 POLA1P09884 1462 aaPredicted RBP22.87■■□□□ 1.25
NPRL3-209ENST00000483663 CUX1P39880 1505 aa22.87■■□□□ 1.25
NPRL3-209ENST00000483663 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
NPRL3-209ENST00000483663 TARBP1Q13395 1621 aaKnown RBP22.85■■□□□ 1.25
NPRL3-209ENST00000483663 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
NPRL3-209ENST00000483663 EIF4G3O43432 1585 aaKnown RBP22.78■■□□□ 1.24
NPRL3-209ENST00000483663 RAD54L2Q9Y4B4 1467 aa22.76■■□□□ 1.23
NPRL3-209ENST00000483663 SOGA1O94964 1423 aa22.73■■□□□ 1.23
NPRL3-209ENST00000483663 AQRO60306 1485 aaKnown RBP eCLIP22.7■■□□□ 1.227e-9■■■■■ 34.8
NPRL3-209ENST00000483663 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
NPRL3-209ENST00000483663 WDR97A6NE52 1622 aa22.64■■□□□ 1.22
NPRL3-209ENST00000483663 SYNJ1O43426 1573 aa22.64■■□□□ 1.22
NPRL3-209ENST00000483663 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.21
NPRL3-209ENST00000483663 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
NPRL3-209ENST00000483663 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
NPRL3-209ENST00000483663 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
NPRL3-209ENST00000483663 OSCARQ8IYS5 282 aa22.55■■□□□ 1.2
NPRL3-209ENST00000483663 ABCA5Q8WWZ7 1642 aa22.51■■□□□ 1.19
NPRL3-209ENST00000483663 CHD1O14646 1710 aa22.5■■□□□ 1.19
NPRL3-209ENST00000483663 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
NPRL3-209ENST00000483663 SNAPC4Q5SXM2 1469 aa22.49■■□□□ 1.19
NPRL3-209ENST00000483663 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
NPRL3-209ENST00000483663 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
NPRL3-209ENST00000483663 MAGI1Q96QZ7 1491 aaPredicted RBP22.46■■□□□ 1.19
NPRL3-209ENST00000483663 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
NPRL3-209ENST00000483663 FBLN2P98095 1184 aa22.37■■□□□ 1.17
NPRL3-209ENST00000483663 CHMP7Q8WUX9 453 aaPredicted RBP22.31■■□□□ 1.16
NPRL3-209ENST00000483663 ADAMTS12P58397 1594 aa22.3■■□□□ 1.16
NPRL3-209ENST00000483663 ERICH3Q5RHP9 1530 aa22.29■■□□□ 1.16
NPRL3-209ENST00000483663 RIMBP3CA6NJZ7 1639 aa22.28■■□□□ 1.16
NPRL3-209ENST00000483663 RIMBP3BA6NNM3 1639 aa22.28■■□□□ 1.16
NPRL3-209ENST00000483663 RIMBP3Q9UFD9 1639 aa22.28■■□□□ 1.16
NPRL3-209ENST00000483663 CLASP1Q7Z460 1538 aa22.27■■□□□ 1.16
NPRL3-209ENST00000483663 ARHGEF11O15085 1522 aa22.26■■□□□ 1.15
NPRL3-209ENST00000483663 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
NPRL3-209ENST00000483663 FHAD1B1AJZ9 1412 aa22.22■■□□□ 1.15
NPRL3-209ENST00000483663 KIF27Q86VH2 1401 aa22.16■■□□□ 1.14
NPRL3-209ENST00000483663 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
NPRL3-209ENST00000483663 CEP170Q5SW79 1584 aa22.14■■□□□ 1.13
NPRL3-209ENST00000483663 NUP160Q12769 1436 aa22.14■■□□□ 1.13
NPRL3-209ENST00000483663 IGF1RP08069 1367 aa22.11■■□□□ 1.13
NPRL3-209ENST00000483663 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
NPRL3-209ENST00000483663 CUL7Q14999 1698 aa22.06■■□□□ 1.12
NPRL3-209ENST00000483663 SHROOM2Q13796 1616 aa22■■□□□ 1.11
NPRL3-209ENST00000483663 CYB5RLQ6IPT4 315 aa21.99■■□□□ 1.11
NPRL3-209ENST00000483663 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
NPRL3-209ENST00000483663 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
NPRL3-209ENST00000483663 CARMIL1Q5VZK9 1371 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms