RNA–Protein interactions for RNA: ENST00000483605.5

SUCLG1-204, Transcript of succinate-CoA ligase alpha subunit, humanhuman

TSL 3

Gene SUCLG1, Length 655 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-204ENST00000483605 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
SUCLG1-204ENST00000483605 ABCC9O60706 1549 aa27.94■■■□□ 2.06
SUCLG1-204ENST00000483605 CCDC180Q9P1Z9 1646 aa27.56■■■□□ 2
SUCLG1-204ENST00000483605 DNAJC5BQ9UF47 199 aa26.46■■□□□ 1.83
SUCLG1-204ENST00000483605 RB1CC1Q8TDY2 1594 aa26.35■■□□□ 1.81
SUCLG1-204ENST00000483605 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
SUCLG1-204ENST00000483605 NACADO15069 1562 aa26.13■■□□□ 1.77
SUCLG1-204ENST00000483605 PABPN1Q86U42 306 aaKnown RBP eCLIP26.09■■□□□ 1.77
SUCLG1-204ENST00000483605 UNC13AQ9UPW8 1703 aa25.79■■□□□ 1.72
SUCLG1-204ENST00000483605 BICRAQ9NZM4 1560 aa25.71■■□□□ 1.71
SUCLG1-204ENST00000483605 MYO15BQ96JP2 1530 aa25.68■■□□□ 1.7
SUCLG1-204ENST00000483605 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
SUCLG1-204ENST00000483605 DCAF1Q9Y4B6 1507 aa25.34■■□□□ 1.65
SUCLG1-204ENST00000483605 SCRIBQ14160 1630 aa25.29■■□□□ 1.64
SUCLG1-204ENST00000483605 CC2D2AQ9P2K1 1620 aa25.15■■□□□ 1.62
SUCLG1-204ENST00000483605 CECR2Q9BXF3 1484 aa25.12■■□□□ 1.61
SUCLG1-204ENST00000483605 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
SUCLG1-204ENST00000483605 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
SUCLG1-204ENST00000483605 DNAJC5Q9H3Z4 198 aa24.22■■□□□ 1.47
SUCLG1-204ENST00000483605 NCAPD3P42695 1498 aa24.2■■□□□ 1.47
SUCLG1-204ENST00000483605 ATAD2BQ9ULI0 1458 aa24.16■■□□□ 1.46
SUCLG1-204ENST00000483605 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
SUCLG1-204ENST00000483605 ERCC6Q03468 1493 aa24.03■■□□□ 1.44
SUCLG1-204ENST00000483605 NESP48681 1621 aa23.99■■□□□ 1.43
SUCLG1-204ENST00000483605 SMARCA2P51531 1590 aa23.97■■□□□ 1.43
SUCLG1-204ENST00000483605 CUX2O14529 1486 aa23.96■■□□□ 1.43
SUCLG1-204ENST00000483605 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
SUCLG1-204ENST00000483605 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
SUCLG1-204ENST00000483605 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
SUCLG1-204ENST00000483605 MROH2BQ7Z745 1585 aa23.83■■□□□ 1.41
SUCLG1-204ENST00000483605 PEG3Q9GZU2 1588 aa23.76■■□□□ 1.39
SUCLG1-204ENST00000483605 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
SUCLG1-204ENST00000483605 LAMC3Q9Y6N6 1575 aa23.6■■□□□ 1.37
SUCLG1-204ENST00000483605 KIF21AQ7Z4S6 1674 aa23.55■■□□□ 1.36
SUCLG1-204ENST00000483605 PDS5BQ9NTI5 1447 aa23.51■■□□□ 1.35
SUCLG1-204ENST00000483605 WIZO95785 1651 aa23.51■■□□□ 1.35
SUCLG1-204ENST00000483605 CADPSQ9ULU8 1353 aa23.5■■□□□ 1.35
SUCLG1-204ENST00000483605 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
SUCLG1-204ENST00000483605 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
SUCLG1-204ENST00000483605 WDR62O43379 1518 aa23.28■■□□□ 1.32
SUCLG1-204ENST00000483605 FANCD2Q9BXW9 1451 aa23.23■■□□□ 1.31
SUCLG1-204ENST00000483605 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
SUCLG1-204ENST00000483605 TRIM41Q8WV44 630 aa23.2■■□□□ 1.3
SUCLG1-204ENST00000483605 CFTRP13569 1480 aa23.18■■□□□ 1.3
SUCLG1-204ENST00000483605 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
SUCLG1-204ENST00000483605 URB2Q14146 1524 aaKnown RBP23.08■■□□□ 1.29
SUCLG1-204ENST00000483605 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
SUCLG1-204ENST00000483605 OSCARQ8IYS5 282 aa22.94■■□□□ 1.26
SUCLG1-204ENST00000483605 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
SUCLG1-204ENST00000483605 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
SUCLG1-204ENST00000483605 PRDM2Q13029 1718 aa22.77■■□□□ 1.23
SUCLG1-204ENST00000483605 IFT140Q96RY7 1462 aa22.76■■□□□ 1.23
SUCLG1-204ENST00000483605 AQRO60306 1485 aaKnown RBP eCLIP22.65■■□□□ 1.22
SUCLG1-204ENST00000483605 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.21
SUCLG1-204ENST00000483605 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.21
SUCLG1-204ENST00000483605 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.21
SUCLG1-204ENST00000483605 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
SUCLG1-204ENST00000483605 EIF4G3O43432 1585 aaKnown RBP22.61■■□□□ 1.21
SUCLG1-204ENST00000483605 ABCC8Q09428 1581 aa22.58■■□□□ 1.2
SUCLG1-204ENST00000483605 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
SUCLG1-204ENST00000483605 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
SUCLG1-204ENST00000483605 TARBP1Q13395 1621 aaKnown RBP22.56■■□□□ 1.2
SUCLG1-204ENST00000483605 POLA1P09884 1462 aaPredicted RBP22.55■■□□□ 1.2
SUCLG1-204ENST00000483605 FBLN2P98095 1184 aa22.53■■□□□ 1.2
SUCLG1-204ENST00000483605 CYB5RLQ6IPT4 315 aa22.51■■□□□ 1.19
SUCLG1-204ENST00000483605 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
SUCLG1-204ENST00000483605 SOGA1O94964 1423 aa22.45■■□□□ 1.18
SUCLG1-204ENST00000483605 CHD1O14646 1710 aa22.45■■□□□ 1.18
SUCLG1-204ENST00000483605 FGD5Q6ZNL6 1462 aa22.4■■□□□ 1.18
SUCLG1-204ENST00000483605 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
SUCLG1-204ENST00000483605 CUX1P39880 1505 aa22.37■■□□□ 1.17
SUCLG1-204ENST00000483605 SNAPC4Q5SXM2 1469 aa22.35■■□□□ 1.17
SUCLG1-204ENST00000483605 SUPT5HO00267 1087 aaKnown RBP22.29■■□□□ 1.16
SUCLG1-204ENST00000483605 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
SUCLG1-204ENST00000483605 TRHP20396 242 aaPredicted RBP22.26■■□□□ 1.15
SUCLG1-204ENST00000483605 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
SUCLG1-204ENST00000483605 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
SUCLG1-204ENST00000483605 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
SUCLG1-204ENST00000483605 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
SUCLG1-204ENST00000483605 SYNJ2O15056 1496 aa22.15■■□□□ 1.14
SUCLG1-204ENST00000483605 GAPVD1Q14C86 1478 aa22.15■■□□□ 1.14
SUCLG1-204ENST00000483605 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
SUCLG1-204ENST00000483605 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
SUCLG1-204ENST00000483605 PBRM1Q86U86 1689 aa22.07■■□□□ 1.12
SUCLG1-204ENST00000483605 ABCA5Q8WWZ7 1642 aa22.05■■□□□ 1.12
SUCLG1-204ENST00000483605 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
SUCLG1-204ENST00000483605 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
SUCLG1-204ENST00000483605 GRIN2AQ12879 1464 aa21.95■■□□□ 1.1
SUCLG1-204ENST00000483605 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
SUCLG1-204ENST00000483605 ADAMTS12P58397 1594 aa21.9■■□□□ 1.1
SUCLG1-204ENST00000483605 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
SUCLG1-204ENST00000483605 NUP160Q12769 1436 aa21.89■■□□□ 1.09
SUCLG1-204ENST00000483605 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
SUCLG1-204ENST00000483605 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
SUCLG1-204ENST00000483605 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
SUCLG1-204ENST00000483605 SHROOM2Q13796 1616 aa21.74■■□□□ 1.07
SUCLG1-204ENST00000483605 PRG4Q92954 1404 aaPredicted RBP21.72■■□□□ 1.07
SUCLG1-204ENST00000483605 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
SUCLG1-204ENST00000483605 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.05
SUCLG1-204ENST00000483605 IGF1RP08069 1367 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms