RNA–Protein interactions for RNA: ENST00000483553.5

SKIV2L-209, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5

Gene SKIV2L, Length 1,307 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-209ENST00000483553 NISCHQ9Y2I1 1504 aa39.2■■■■□ 3.87
SKIV2L-209ENST00000483553 ABCC9O60706 1549 aa35.77■■■■□ 3.32
SKIV2L-209ENST00000483553 CCDC180Q9P1Z9 1646 aa35.37■■■■□ 3.25
SKIV2L-209ENST00000483553 DNAJC5BQ9UF47 199 aa33.95■■■■□ 3.03
SKIV2L-209ENST00000483553 RB1CC1Q8TDY2 1594 aa33.89■■■■□ 3.02
SKIV2L-209ENST00000483553 NACADO15069 1562 aa33.57■■■□□ 2.96
SKIV2L-209ENST00000483553 DCAF8L2P0C7V8 631 aa33.3■■■□□ 2.92
SKIV2L-209ENST00000483553 PABPN1Q86U42 306 aaKnown RBP eCLIP33.25■■■□□ 2.912e-6■■■□□ 17.4
SKIV2L-209ENST00000483553 UNC13AQ9UPW8 1703 aa33.08■■■□□ 2.89
SKIV2L-209ENST00000483553 MYO15BQ96JP2 1530 aa32.98■■■□□ 2.87
SKIV2L-209ENST00000483553 BICRAQ9NZM4 1560 aa32.88■■■□□ 2.85
SKIV2L-209ENST00000483553 SHROOM4Q9ULL8 1493 aa32.46■■■□□ 2.79
SKIV2L-209ENST00000483553 DCAF1Q9Y4B6 1507 aa32.38■■■□□ 2.77
SKIV2L-209ENST00000483553 ZCCHC6Q5VYS8 1495 aaKnown RBP32.37■■■□□ 2.77
SKIV2L-209ENST00000483553 CC2D2AQ9P2K1 1620 aa32.3■■■□□ 2.76
SKIV2L-209ENST00000483553 CECR2Q9BXF3 1484 aa32.29■■■□□ 2.76
SKIV2L-209ENST00000483553 SCRIBQ14160 1630 aa32.16■■■□□ 2.74
SKIV2L-209ENST00000483553 EIF4G1Q04637 1599 aaKnown RBP32.13■■■□□ 2.73
SKIV2L-209ENST00000483553 DNAJC5Q9H3Z4 198 aa31.55■■■□□ 2.64
SKIV2L-209ENST00000483553 CUX2O14529 1486 aa31.06■■■□□ 2.56
SKIV2L-209ENST00000483553 NCAPD3P42695 1498 aa30.99■■■□□ 2.55
SKIV2L-209ENST00000483553 ERCC6Q03468 1493 aa30.95■■■□□ 2.55
SKIV2L-209ENST00000483553 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.52
SKIV2L-209ENST00000483553 SMARCA2P51531 1590 aa30.72■■■□□ 2.51
SKIV2L-209ENST00000483553 HMGXB3Q12766 1538 aa30.7■■■□□ 2.51
SKIV2L-209ENST00000483553 SMARCA4P51532 1647 aa30.66■■■□□ 2.5
SKIV2L-209ENST00000483553 NESP48681 1621 aa30.59■■■□□ 2.49
SKIV2L-209ENST00000483553 BAZ1BQ9UIG0 1483 aaKnown RBP30.49■■■□□ 2.47
SKIV2L-209ENST00000483553 BAZ1AQ9NRL2 1556 aaPredicted RBP30.47■■■□□ 2.47
SKIV2L-209ENST00000483553 PEG3Q9GZU2 1588 aa30.39■■■□□ 2.46
SKIV2L-209ENST00000483553 THOC2Q8NI27 1593 aaKnown RBP30.37■■■□□ 2.45
SKIV2L-209ENST00000483553 LAMC3Q9Y6N6 1575 aa30.36■■■□□ 2.45
SKIV2L-209ENST00000483553 PDS5BQ9NTI5 1447 aa30.22■■■□□ 2.43
SKIV2L-209ENST00000483553 KIF21AQ7Z4S6 1674 aa30.19■■■□□ 2.42
SKIV2L-209ENST00000483553 MROH2BQ7Z745 1585 aa30.17■■■□□ 2.42
SKIV2L-209ENST00000483553 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
SKIV2L-209ENST00000483553 TRIM41Q8WV44 630 aa29.95■■■□□ 2.38
SKIV2L-209ENST00000483553 MRC2Q9UBG0 1479 aa29.94■■■□□ 2.38
SKIV2L-209ENST00000483553 WDR62O43379 1518 aa29.88■■■□□ 2.37
SKIV2L-209ENST00000483553 WIZO95785 1651 aa29.79■■■□□ 2.36
SKIV2L-209ENST00000483553 CEP164Q9UPV0 1460 aa29.74■■■□□ 2.35
SKIV2L-209ENST00000483553 FANCD2Q9BXW9 1451 aa29.67■■■□□ 2.34
SKIV2L-209ENST00000483553 OSCARQ8IYS5 282 aa29.6■■■□□ 2.33
SKIV2L-209ENST00000483553 CFTRP13569 1480 aa29.59■■■□□ 2.33
SKIV2L-209ENST00000483553 URB2Q14146 1524 aaKnown RBP29.43■■■□□ 2.3
SKIV2L-209ENST00000483553 RSF1Q96T23 1441 aaPredicted RBP29.4■■■□□ 2.3
SKIV2L-209ENST00000483553 TOP2AP11388 1531 aaKnown RBP29.39■■■□□ 2.3
SKIV2L-209ENST00000483553 PRDM2Q13029 1718 aa29.24■■■□□ 2.27
SKIV2L-209ENST00000483553 RIMBP3CA6NJZ7 1639 aa29.19■■■□□ 2.26
SKIV2L-209ENST00000483553 RIMBP3BA6NNM3 1639 aa29.19■■■□□ 2.26
SKIV2L-209ENST00000483553 RIMBP3Q9UFD9 1639 aa29.19■■■□□ 2.26
SKIV2L-209ENST00000483553 IFT140Q96RY7 1462 aa29.18■■■□□ 2.26
SKIV2L-209ENST00000483553 ZNF608Q9ULD9 1512 aaPredicted RBP29.14■■■□□ 2.26
SKIV2L-209ENST00000483553 CCDC88BA6NC98 1476 aa29.08■■■□□ 2.25
SKIV2L-209ENST00000483553 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
SKIV2L-209ENST00000483553 TOPBP1Q92547 1522 aa29.05■■■□□ 2.24
SKIV2L-209ENST00000483553 ABCC8Q09428 1581 aa29.02■■■□□ 2.24
SKIV2L-209ENST00000483553 EIF4G3O43432 1585 aaKnown RBP28.95■■■□□ 2.22
SKIV2L-209ENST00000483553 DNMBPQ6XZF7 1577 aa28.91■■■□□ 2.22
SKIV2L-209ENST00000483553 CYB5RLQ6IPT4 315 aa28.91■■■□□ 2.22
SKIV2L-209ENST00000483553 AQRO60306 1485 aaKnown RBP eCLIP28.83■■■□□ 2.212e-7■■■□□ 19
SKIV2L-209ENST00000483553 CHD1O14646 1710 aa28.82■■■□□ 2.2
SKIV2L-209ENST00000483553 TARBP1Q13395 1621 aaKnown RBP28.82■■■□□ 2.2
SKIV2L-209ENST00000483553 FBLN2P98095 1184 aa28.76■■■□□ 2.19
SKIV2L-209ENST00000483553 TRHP20396 242 aaPredicted RBP28.73■■■□□ 2.19
SKIV2L-209ENST00000483553 ARAP1Q96P48 1450 aa28.73■■■□□ 2.19
SKIV2L-209ENST00000483553 POLA1P09884 1462 aaPredicted RBP28.72■■■□□ 2.19
SKIV2L-209ENST00000483553 SUPT5HO00267 1087 aaKnown RBP28.68■■■□□ 2.18
SKIV2L-209ENST00000483553 SOGA1O94964 1423 aa28.62■■■□□ 2.17
SKIV2L-209ENST00000483553 RAD54L2Q9Y4B4 1467 aa28.61■■■□□ 2.17
SKIV2L-209ENST00000483553 TDRD9Q8NDG6 1382 aaKnown RBP28.6■■■□□ 2.17
SKIV2L-209ENST00000483553 WDR97A6NE52 1622 aa28.55■■■□□ 2.16
SKIV2L-209ENST00000483553 SNAPC4Q5SXM2 1469 aa28.52■■■□□ 2.16
SKIV2L-209ENST00000483553 CHMP7Q8WUX9 453 aaPredicted RBP28.5■■■□□ 2.15
SKIV2L-209ENST00000483553 CLASP1Q7Z460 1538 aa28.49■■■□□ 2.15
SKIV2L-209ENST00000483553 FGD5Q6ZNL6 1462 aa28.47■■■□□ 2.15
SKIV2L-209ENST00000483553 SYNJ1O43426 1573 aa28.46■■■□□ 2.15
SKIV2L-209ENST00000483553 MAGI1Q96QZ7 1491 aaPredicted RBP28.46■■■□□ 2.15
SKIV2L-209ENST00000483553 GRIN2BQ13224 1484 aa28.41■■■□□ 2.14
SKIV2L-209ENST00000483553 CUX1P39880 1505 aa28.38■■■□□ 2.13
SKIV2L-209ENST00000483553 SYNJ2O15056 1496 aa28.37■■■□□ 2.13
SKIV2L-209ENST00000483553 GAPVD1Q14C86 1478 aa28.26■■■□□ 2.11
SKIV2L-209ENST00000483553 AEBP2Q6ZN18 517 aaPredicted RBP28.24■■■□□ 2.11
SKIV2L-209ENST00000483553 PBRM1Q86U86 1689 aa28.24■■■□□ 2.11
SKIV2L-209ENST00000483553 ABCA10Q8WWZ4 1543 aa28.15■■■□□ 2.1
SKIV2L-209ENST00000483553 ABCA5Q8WWZ7 1642 aa28.12■■■□□ 2.09
SKIV2L-209ENST00000483553 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
SKIV2L-209ENST00000483553 ERCC6L2Q5T890 1561 aa27.98■■■□□ 2.07
SKIV2L-209ENST00000483553 WRNQ14191 1432 aaPredicted RBP eCLIP27.97■■■□□ 2.07
SKIV2L-209ENST00000483553 NUP160Q12769 1436 aa27.96■■■□□ 2.07
SKIV2L-209ENST00000483553 CEP170Q5SW79 1584 aa27.94■■■□□ 2.06
SKIV2L-209ENST00000483553 ADAMTS12P58397 1594 aa27.93■■■□□ 2.06
SKIV2L-209ENST00000483553 FHAD1B1AJZ9 1412 aa27.89■■■□□ 2.05
SKIV2L-209ENST00000483553 SHROOM2Q13796 1616 aa27.87■■■□□ 2.05
SKIV2L-209ENST00000483553 TOP2BQ02880 1626 aa27.82■■■□□ 2.04
SKIV2L-209ENST00000483553 BIVM-ERCC5R4GMW8 1640 aa27.82■■■□□ 2.04
SKIV2L-209ENST00000483553 ERICH3Q5RHP9 1530 aa27.8■■■□□ 2.04
SKIV2L-209ENST00000483553 KIF13AQ9H1H9 1805 aa27.74■■■□□ 2.03
SKIV2L-209ENST00000483553 PRG4Q92954 1404 aaPredicted RBP27.73■■■□□ 2.03
SKIV2L-209ENST00000483553 JPH4Q96JJ6 628 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms