RNA–Protein interactions for RNA: ENST00000483173.5

BRD9-204, Transcript of bromodomain containing 9, humanhuman

TSL 2 BASIC

Gene BRD9, Length 2,120 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-204ENST00000483173 SF3B1O75533 1304 aaKnown RBP eCLIP13.29□□□□□ -0.282e-6■■■■■ 133.5
BRD9-204ENST00000483173 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.66□□□□□ -0.223e-6■■■■■ 132.1
BRD9-204ENST00000483173 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.454e-8■■■■■ 75.7
BRD9-204ENST00000483173 TARDBPQ13148 414 aaKnown RBP eCLIP11.64□□□□□ -0.551e-14■■■■■ 72.7
BRD9-204ENST00000483173 DKC1O60832 514 aaKnown RBP eCLIP14.02□□□□□ -0.172e-7■■■■■ 49.9
BRD9-204ENST00000483173 AATFQ9NY61 560 aaKnown RBP eCLIP15.02□□□□□ -0.012e-7■■■■■ 46.1
BRD9-204ENST00000483173 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.84□□□□□ -0.193e-7■■■■■ 40.8
BRD9-204ENST00000483173 TRA2AQ13595 282 aaKnown RBP eCLIP11.83□□□□□ -0.522e-8■■■■■ 37.7
BRD9-204ENST00000483173 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.834e-7■■■■■ 37.4
BRD9-204ENST00000483173 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.72□□□□□ -0.376e-8■■■■■ 32.8
BRD9-204ENST00000483173 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.66□□□□□ -0.062e-6■■■■■ 32.6
BRD9-204ENST00000483173 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.74□□□□□ -0.692e-8■■■■■ 32.5
BRD9-204ENST00000483173 RBM22Q9NW64 420 aaKnown RBP eCLIP12.89□□□□□ -0.351e-14■■■■■ 31.6
BRD9-204ENST00000483173 ZRANB2O95218 330 aaKnown RBP eCLIP13.71□□□□□ -0.212e-6■■■■■ 31
BRD9-204ENST00000483173 AARSP49588 968 aaKnown RBP eCLIP13.4□□□□□ -0.261e-6■■■■■ 29.7
BRD9-204ENST00000483173 SF3B4Q15427 424 aaKnown RBP eCLIP11.86□□□□□ -0.512e-20■■■■■ 29
BRD9-204ENST00000483173 EFTUD2Q15029 972 aaKnown RBP eCLIP12.82□□□□□ -0.361e-7■■■■■ 28.9
BRD9-204ENST00000483173 PRPF4O43172 522 aaKnown RBP eCLIP12.75□□□□□ -0.375e-7■■■■■ 27.5
BRD9-204ENST00000483173 PTBP1P26599 531 aaKnown RBP eCLIP11.21□□□□□ -0.615e-6■■■■□ 24.3
BRD9-204ENST00000483173 PCBP2Q15366 365 aaKnown RBP eCLIP12.37□□□□□ -0.438e-6■■■■□ 24
BRD9-204ENST00000483173 SRSF1Q07955 248 aaKnown RBP eCLIP10.53□□□□□ -0.728e-7■■■■□ 23.2
BRD9-204ENST00000483173 ZNF622Q969S3 477 aaKnown RBP eCLIP15.17■□□□□ 0.023e-7■■■■□ 23.1
BRD9-204ENST00000483173 GRSF1Q12849 480 aaKnown RBP eCLIP12.54□□□□□ -0.41e-8■■■■□ 23.1
BRD9-204ENST00000483173 TIAL1Q01085 375 aaKnown RBP eCLIP12.56□□□□□ -0.42e-6■■■■□ 22.9
BRD9-204ENST00000483173 RBFOX2O43251 390 aaKnown RBP eCLIP10.3□□□□□ -0.764e-9■■■■□ 22.7
BRD9-204ENST00000483173 SF3A3Q12874 501 aaKnown RBP eCLIP12.77□□□□□ -0.373e-7■■■■□ 22.6
BRD9-204ENST00000483173 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.39□□□□□ -0.594e-7■■■■□ 22.2
BRD9-204ENST00000483173 FUSP35637 526 aaKnown RBP eCLIP8.06□□□□□ -1.121e-6■■■■□ 22.1
BRD9-204ENST00000483173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.24e-9■■■■□ 21.4
BRD9-204ENST00000483173 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.39□□□□□ -0.592e-7■■■■□ 21.2
BRD9-204ENST00000483173 HNRNPMP52272 730 aaKnown RBP eCLIP18.74■□□□□ 0.595e-7■■■■□ 21.2
BRD9-204ENST00000483173 SRSF7Q16629 238 aaKnown RBP eCLIP10.6□□□□□ -0.713e-7■■■■□ 20.9
BRD9-204ENST00000483173 GTF2F1P35269 517 aaKnown RBP eCLIP14.33□□□□□ -0.124e-8■■■■□ 20.6
BRD9-204ENST00000483173 SMNDC1O75940 238 aaKnown RBP eCLIP12.88□□□□□ -0.359e-7■■■■□ 19.6
BRD9-204ENST00000483173 NONOQ15233 471 aaKnown RBP eCLIP14.43□□□□□ -0.15e-7■■■□□ 19.1
BRD9-204ENST00000483173 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.93■□□□□ 0.622e-9■■■□□ 19.1
BRD9-204ENST00000483173 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.18□□□□□ -0.784e-7■■■□□ 18.7
BRD9-204ENST00000483173 EWSR1Q01844 656 aaKnown RBP eCLIP10.34□□□□□ -0.758e-8■■■□□ 18.2
BRD9-204ENST00000483173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.533e-7■■■□□ 17.2
BRD9-204ENST00000483173 CPSF6Q16630 551 aaKnown RBP eCLIP12.25□□□□□ -0.452e-7■■■□□ 16.2
BRD9-204ENST00000483173 RBM5P52756 815 aaKnown RBP eCLIP14.86□□□□□ -0.035e-8■■■□□ 16
BRD9-204ENST00000483173 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.15□□□□□ -0.32e-7■■■□□ 15.9
BRD9-204ENST00000483173 FTOQ9C0B1 505 aaKnown RBP eCLIP14.58□□□□□ -0.088e-6■■■□□ 15.4
BRD9-204ENST00000483173 FXR2P51116 673 aaKnown RBP eCLIP14.28□□□□□ -0.125e-6■■■□□ 14.9
BRD9-204ENST00000483173 DDX3XO00571 662 aaKnown RBP eCLIP13.57□□□□□ -0.246e-6■■□□□ 14.5
BRD9-204ENST00000483173 PPIGQ13427 754 aaKnown RBP eCLIP13.25□□□□□ -0.297e-7■■□□□ 14
BRD9-204ENST00000483173 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.21■□□□□ 0.033e-7■■□□□ 12.5
BRD9-204ENST00000483173 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.29□□□□□ -0.285e-8■■□□□ 12.3
BRD9-204ENST00000483173 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.1■□□□□ 0.652e-9■■□□□ 11.7
BRD9-204ENST00000483173 PUM1Q14671 1186 aaKnown RBP eCLIP11.75□□□□□ -0.534e-7■■□□□ 11.6
BRD9-204ENST00000483173 WRNQ14191 1432 aaPredicted RBP eCLIP21.08■□□□□ 0.967e-9■■□□□ 11.4
BRD9-204ENST00000483173 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.1□□□□□ -0.474e-6■■□□□ 11.4
BRD9-204ENST00000483173 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.35□□□□□ -0.273e-6■□□□□ 11.1
BRD9-204ENST00000483173 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.16□□□□□ -0.147e-6■□□□□ 10.8
BRD9-204ENST00000483173 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.6□□□□□ -0.394e-7■□□□□ 10.2
BRD9-204ENST00000483173 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■□□□□ 10.2
BRD9-204ENST00000483173 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.76□□□□□ -0.371e-6■□□□□ 9.9
BRD9-204ENST00000483173 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.87□□□□□ -0.036e-12■□□□□ 9.7
BRD9-204ENST00000483173 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.58□□□□□ -0.41e-6■□□□□ 9.2
BRD9-204ENST00000483173 RBM15Q96T37 977 aaKnown RBP eCLIP12.96□□□□□ -0.332e-8■□□□□ 9.1
BRD9-204ENST00000483173 EIF3HO15372 352 aaKnown RBP eCLIP13.18□□□□□ -0.33e-8■□□□□ 8.6
BRD9-204ENST00000483173 PABPC4Q13310 644 aaKnown RBP eCLIP14.24□□□□□ -0.137e-6■□□□□ 8.5
BRD9-204ENST00000483173 YBX3P16989 372 aaKnown RBP eCLIP14.72□□□□□ -0.054e-6■□□□□ 8.3
Retrieved 63 of 63 RNA–protein pairs in 14.7 ms