RNA–Protein interactions for RNA: ENST00000483024.1

PKD1-214, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 465 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-214ENST00000483024 NISCHQ9Y2I1 1504 aa44.29■■■■■ 4.68
PKD1-214ENST00000483024 ABCC9O60706 1549 aa40.62■■■■■ 4.09
PKD1-214ENST00000483024 CCDC180Q9P1Z9 1646 aa39.8■■■■□ 3.96
PKD1-214ENST00000483024 DNAJC5BQ9UF47 199 aa38.69■■■■□ 3.78
PKD1-214ENST00000483024 RB1CC1Q8TDY2 1594 aa38.22■■■■□ 3.71
PKD1-214ENST00000483024 DCAF8L2P0C7V8 631 aa37.89■■■■□ 3.66
PKD1-214ENST00000483024 PABPN1Q86U42 306 aaKnown RBP eCLIP37.85■■■■□ 3.65
PKD1-214ENST00000483024 NACADO15069 1562 aa37.81■■■■□ 3.64
PKD1-214ENST00000483024 UNC13AQ9UPW8 1703 aa37.36■■■■□ 3.57
PKD1-214ENST00000483024 BICRAQ9NZM4 1560 aa37.22■■■■□ 3.55
PKD1-214ENST00000483024 MYO15BQ96JP2 1530 aa37.04■■■■□ 3.52
PKD1-214ENST00000483024 ZCCHC6Q5VYS8 1495 aaKnown RBP36.57■■■■□ 3.45
PKD1-214ENST00000483024 CECR2Q9BXF3 1484 aa36.57■■■■□ 3.45
PKD1-214ENST00000483024 CC2D2AQ9P2K1 1620 aa36.55■■■■□ 3.44
PKD1-214ENST00000483024 SCRIBQ14160 1630 aa36.46■■■■□ 3.43
PKD1-214ENST00000483024 SHROOM4Q9ULL8 1493 aa36.43■■■■□ 3.42
PKD1-214ENST00000483024 DCAF1Q9Y4B6 1507 aa36.41■■■■□ 3.42
PKD1-214ENST00000483024 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.41
PKD1-214ENST00000483024 DNAJC5Q9H3Z4 198 aa35.76■■■■□ 3.32
PKD1-214ENST00000483024 ERCC6Q03468 1493 aa35.03■■■■□ 3.2
PKD1-214ENST00000483024 CUX2O14529 1486 aa35.03■■■■□ 3.2
PKD1-214ENST00000483024 NCAPD3P42695 1498 aa34.98■■■■□ 3.19
PKD1-214ENST00000483024 ATAD2BQ9ULI0 1458 aa34.85■■■■□ 3.17
PKD1-214ENST00000483024 NESP48681 1621 aa34.76■■■■□ 3.15
PKD1-214ENST00000483024 SMARCA4P51532 1647 aa34.63■■■■□ 3.13
PKD1-214ENST00000483024 SMARCA2P51531 1590 aa34.62■■■■□ 3.13
PKD1-214ENST00000483024 HMGXB3Q12766 1538 aa34.6■■■■□ 3.13
PKD1-214ENST00000483024 BAZ1BQ9UIG0 1483 aaKnown RBP34.47■■■■□ 3.11
PKD1-214ENST00000483024 BAZ1AQ9NRL2 1556 aaPredicted RBP34.36■■■■□ 3.09
PKD1-214ENST00000483024 THOC2Q8NI27 1593 aaKnown RBP34.34■■■■□ 3.09
PKD1-214ENST00000483024 MROH2BQ7Z745 1585 aa34.21■■■■□ 3.07
PKD1-214ENST00000483024 PEG3Q9GZU2 1588 aa34.21■■■■□ 3.07
PKD1-214ENST00000483024 LAMC3Q9Y6N6 1575 aa34.21■■■■□ 3.07
PKD1-214ENST00000483024 KIF21AQ7Z4S6 1674 aa34.14■■■■□ 3.06
PKD1-214ENST00000483024 TRIM41Q8WV44 630 aa34.12■■■■□ 3.05
PKD1-214ENST00000483024 PDS5BQ9NTI5 1447 aa34.1■■■■□ 3.05
PKD1-214ENST00000483024 CADPSQ9ULU8 1353 aa33.95■■■■□ 3.02
PKD1-214ENST00000483024 MRC2Q9UBG0 1479 aa33.86■■■■□ 3.01
PKD1-214ENST00000483024 WDR62O43379 1518 aa33.75■■■□□ 2.99
PKD1-214ENST00000483024 WIZO95785 1651 aa33.74■■■□□ 2.99
PKD1-214ENST00000483024 CEP164Q9UPV0 1460 aa33.62■■■□□ 2.97
PKD1-214ENST00000483024 FANCD2Q9BXW9 1451 aa33.57■■■□□ 2.97
PKD1-214ENST00000483024 OSCARQ8IYS5 282 aa33.48■■■□□ 2.95
PKD1-214ENST00000483024 CFTRP13569 1480 aa33.41■■■□□ 2.94
PKD1-214ENST00000483024 URB2Q14146 1524 aaKnown RBP33.36■■■□□ 2.93
PKD1-214ENST00000483024 RSF1Q96T23 1441 aaPredicted RBP33.3■■■□□ 2.92
PKD1-214ENST00000483024 TOP2AP11388 1531 aaKnown RBP33.2■■■□□ 2.91
PKD1-214ENST00000483024 ZNF608Q9ULD9 1512 aaPredicted RBP33.08■■■□□ 2.89
PKD1-214ENST00000483024 RIMBP3CA6NJZ7 1639 aa33.05■■■□□ 2.88
PKD1-214ENST00000483024 RIMBP3BA6NNM3 1639 aa33.05■■■□□ 2.88
PKD1-214ENST00000483024 RIMBP3Q9UFD9 1639 aa33.05■■■□□ 2.88
PKD1-214ENST00000483024 IFT140Q96RY7 1462 aa32.95■■■□□ 2.87
PKD1-214ENST00000483024 CCDC88BA6NC98 1476 aa32.93■■■□□ 2.86
PKD1-214ENST00000483024 ARHGEF11O15085 1522 aa32.9■■■□□ 2.86
PKD1-214ENST00000483024 TOPBP1Q92547 1522 aa32.87■■■□□ 2.85
PKD1-214ENST00000483024 PRDM2Q13029 1718 aa32.85■■■□□ 2.85
PKD1-214ENST00000483024 CYB5RLQ6IPT4 315 aa32.84■■■□□ 2.85
PKD1-214ENST00000483024 EIF4G3O43432 1585 aaKnown RBP32.75■■■□□ 2.83
PKD1-214ENST00000483024 AQRO60306 1485 aaKnown RBP eCLIP32.73■■■□□ 2.832e-9■■■■■ 49.5
PKD1-214ENST00000483024 FBLN2P98095 1184 aa32.69■■■□□ 2.82
PKD1-214ENST00000483024 TRHP20396 242 aaPredicted RBP32.64■■■□□ 2.82
PKD1-214ENST00000483024 DNMBPQ6XZF7 1577 aa32.64■■■□□ 2.82
PKD1-214ENST00000483024 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
PKD1-214ENST00000483024 CHD1O14646 1710 aa32.6■■■□□ 2.81
PKD1-214ENST00000483024 ARAP1Q96P48 1450 aa32.58■■■□□ 2.81
PKD1-214ENST00000483024 TARBP1Q13395 1621 aaKnown RBP32.57■■■□□ 2.8
PKD1-214ENST00000483024 POLA1P09884 1462 aaPredicted RBP32.51■■■□□ 2.79
PKD1-214ENST00000483024 RAD54L2Q9Y4B4 1467 aa32.5■■■□□ 2.79
PKD1-214ENST00000483024 TDRD9Q8NDG6 1382 aaKnown RBP32.47■■■□□ 2.79
PKD1-214ENST00000483024 SOGA1O94964 1423 aa32.39■■■□□ 2.78
PKD1-214ENST00000483024 SNAPC4Q5SXM2 1469 aa32.32■■■□□ 2.76
PKD1-214ENST00000483024 CHMP7Q8WUX9 453 aaPredicted RBP32.27■■■□□ 2.76
PKD1-214ENST00000483024 FGD5Q6ZNL6 1462 aa32.25■■■□□ 2.75
PKD1-214ENST00000483024 CLASP1Q7Z460 1538 aa32.21■■■□□ 2.75
PKD1-214ENST00000483024 CUX1P39880 1505 aa32.15■■■□□ 2.74
PKD1-214ENST00000483024 SYNJ1O43426 1573 aa32.11■■■□□ 2.73
PKD1-214ENST00000483024 MAGI1Q96QZ7 1491 aaPredicted RBP32.1■■■□□ 2.73
PKD1-214ENST00000483024 GRIN2BQ13224 1484 aa32.1■■■□□ 2.73
PKD1-214ENST00000483024 SYNJ2O15056 1496 aa32.04■■■□□ 2.72
PKD1-214ENST00000483024 WDR97A6NE52 1622 aa32.02■■■□□ 2.72
PKD1-214ENST00000483024 AEBP2Q6ZN18 517 aaPredicted RBP32.01■■■□□ 2.71
PKD1-214ENST00000483024 GAPVD1Q14C86 1478 aa31.96■■■□□ 2.71
PKD1-214ENST00000483024 PBRM1Q86U86 1689 aa31.87■■■□□ 2.69
PKD1-214ENST00000483024 ERCC6L2Q5T890 1561 aa31.82■■■□□ 2.68
PKD1-214ENST00000483024 ABCA10Q8WWZ4 1543 aa31.79■■■□□ 2.68
PKD1-214ENST00000483024 ABCA5Q8WWZ7 1642 aa31.76■■■□□ 2.67
PKD1-214ENST00000483024 GRIN2AQ12879 1464 aa31.69■■■□□ 2.66
PKD1-214ENST00000483024 CEP170Q5SW79 1584 aa31.64■■■□□ 2.65
PKD1-214ENST00000483024 SUPT5HO00267 1087 aaKnown RBP31.63■■■□□ 2.65
PKD1-214ENST00000483024 NUP160Q12769 1436 aa31.59■■■□□ 2.65
PKD1-214ENST00000483024 WRNQ14191 1432 aaPredicted RBP eCLIP31.58■■■□□ 2.65
PKD1-214ENST00000483024 ADAMTS12P58397 1594 aa31.58■■■□□ 2.65
PKD1-214ENST00000483024 FHAD1B1AJZ9 1412 aa31.49■■■□□ 2.63
PKD1-214ENST00000483024 SHROOM2Q13796 1616 aa31.45■■■□□ 2.62
PKD1-214ENST00000483024 PRG4Q92954 1404 aaPredicted RBP31.41■■■□□ 2.62
PKD1-214ENST00000483024 TOP2BQ02880 1626 aa31.39■■■□□ 2.62
PKD1-214ENST00000483024 JPH4Q96JJ6 628 aa31.38■■■□□ 2.61
PKD1-214ENST00000483024 BIVM-ERCC5R4GMW8 1640 aa31.37■■■□□ 2.61
PKD1-214ENST00000483024 ERICH3Q5RHP9 1530 aa31.33■■■□□ 2.61
PKD1-214ENST00000483024 KIF13AQ9H1H9 1805 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms