RNA–Protein interactions for RNA: ENST00000482934.1

CAMTA1-211, Transcript of calmodulin binding transcription activator 1, humanhuman

TSL 3

Gene CAMTA1, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMTA1-211ENST00000482934 NISCHQ9Y2I1 1504 aa32.1■■■□□ 2.73
CAMTA1-211ENST00000482934 CCDC180Q9P1Z9 1646 aa28.7■■■□□ 2.19
CAMTA1-211ENST00000482934 ABCC9O60706 1549 aa28.04■■■□□ 2.08
CAMTA1-211ENST00000482934 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
CAMTA1-211ENST00000482934 NACADO15069 1562 aa26.9■■□□□ 1.9
CAMTA1-211ENST00000482934 ZCCHC6Q5VYS8 1495 aaKnown RBP26.73■■□□□ 1.87
CAMTA1-211ENST00000482934 MYO15BQ96JP2 1530 aa26.71■■□□□ 1.87
CAMTA1-211ENST00000482934 DCAF8L2P0C7V8 631 aa26.64■■□□□ 1.86
CAMTA1-211ENST00000482934 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
CAMTA1-211ENST00000482934 DCAF1Q9Y4B6 1507 aa26.56■■□□□ 1.84
CAMTA1-211ENST00000482934 BICRAQ9NZM4 1560 aa26.26■■□□□ 1.79
CAMTA1-211ENST00000482934 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
CAMTA1-211ENST00000482934 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.77
CAMTA1-211ENST00000482934 DNAJC5BQ9UF47 199 aa25.85■■□□□ 1.73
CAMTA1-211ENST00000482934 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
CAMTA1-211ENST00000482934 EIF4G1Q04637 1599 aaKnown RBP25.51■■□□□ 1.67
CAMTA1-211ENST00000482934 CC2D2AQ9P2K1 1620 aa25.45■■□□□ 1.67
CAMTA1-211ENST00000482934 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
CAMTA1-211ENST00000482934 SMARCA4P51532 1647 aa24.99■■□□□ 1.59
CAMTA1-211ENST00000482934 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
CAMTA1-211ENST00000482934 ATAD2BQ9ULI0 1458 aa24.8■■□□□ 1.56
CAMTA1-211ENST00000482934 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
CAMTA1-211ENST00000482934 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
CAMTA1-211ENST00000482934 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
CAMTA1-211ENST00000482934 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
CAMTA1-211ENST00000482934 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
CAMTA1-211ENST00000482934 BAZ1BQ9UIG0 1483 aaKnown RBP24.57■■□□□ 1.52
CAMTA1-211ENST00000482934 WIZO95785 1651 aa24.55■■□□□ 1.52
CAMTA1-211ENST00000482934 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
CAMTA1-211ENST00000482934 NESP48681 1621 aa24.28■■□□□ 1.48
CAMTA1-211ENST00000482934 LAMC3Q9Y6N6 1575 aa24.21■■□□□ 1.47
CAMTA1-211ENST00000482934 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.47
CAMTA1-211ENST00000482934 KIF21AQ7Z4S6 1674 aa24.13■■□□□ 1.45
CAMTA1-211ENST00000482934 ERCC6Q03468 1493 aa24.11■■□□□ 1.45
CAMTA1-211ENST00000482934 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
CAMTA1-211ENST00000482934 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
CAMTA1-211ENST00000482934 CUX2O14529 1486 aa23.96■■□□□ 1.43
CAMTA1-211ENST00000482934 PRDM2Q13029 1718 aa23.96■■□□□ 1.43
CAMTA1-211ENST00000482934 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
CAMTA1-211ENST00000482934 CFTRP13569 1480 aa23.9■■□□□ 1.42
CAMTA1-211ENST00000482934 CCDC88BA6NC98 1476 aa23.88■■□□□ 1.41
CAMTA1-211ENST00000482934 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
CAMTA1-211ENST00000482934 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
CAMTA1-211ENST00000482934 CEP164Q9UPV0 1460 aa23.75■■□□□ 1.39
CAMTA1-211ENST00000482934 WDR62O43379 1518 aa23.74■■□□□ 1.39
CAMTA1-211ENST00000482934 URB2Q14146 1524 aaKnown RBP23.6■■□□□ 1.37
CAMTA1-211ENST00000482934 SUPT5HO00267 1087 aaKnown RBP23.52■■□□□ 1.36
CAMTA1-211ENST00000482934 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
CAMTA1-211ENST00000482934 DNMBPQ6XZF7 1577 aa23.4■■□□□ 1.34
CAMTA1-211ENST00000482934 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
CAMTA1-211ENST00000482934 DNAJC5Q9H3Z4 198 aa23.31■■□□□ 1.32
CAMTA1-211ENST00000482934 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
CAMTA1-211ENST00000482934 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
CAMTA1-211ENST00000482934 CUX1P39880 1505 aa23.23■■□□□ 1.31
CAMTA1-211ENST00000482934 POLA1P09884 1462 aaPredicted RBP23.21■■□□□ 1.31
CAMTA1-211ENST00000482934 ZNF608Q9ULD9 1512 aaPredicted RBP23.21■■□□□ 1.31
CAMTA1-211ENST00000482934 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
CAMTA1-211ENST00000482934 FGD5Q6ZNL6 1462 aa23.13■■□□□ 1.29
CAMTA1-211ENST00000482934 WDR97A6NE52 1622 aa23.12■■□□□ 1.29
CAMTA1-211ENST00000482934 RAD54L2Q9Y4B4 1467 aa23.1■■□□□ 1.29
CAMTA1-211ENST00000482934 BIVM-ERCC5R4GMW8 1640 aa23.08■■□□□ 1.28
CAMTA1-211ENST00000482934 SOGA1O94964 1423 aa23.04■■□□□ 1.28
CAMTA1-211ENST00000482934 SYNJ1O43426 1573 aa23.02■■□□□ 1.28
CAMTA1-211ENST00000482934 AQRO60306 1485 aaKnown RBP eCLIP23.02■■□□□ 1.28
CAMTA1-211ENST00000482934 TOP2BQ02880 1626 aa23.01■■□□□ 1.27
CAMTA1-211ENST00000482934 CHD1O14646 1710 aa22.99■■□□□ 1.27
CAMTA1-211ENST00000482934 PBRM1Q86U86 1689 aa22.95■■□□□ 1.26
CAMTA1-211ENST00000482934 WRNQ14191 1432 aaPredicted RBP eCLIP22.94■■□□□ 1.26
CAMTA1-211ENST00000482934 TDRD9Q8NDG6 1382 aaKnown RBP22.92■■□□□ 1.26
CAMTA1-211ENST00000482934 ABCA5Q8WWZ7 1642 aa22.91■■□□□ 1.26
CAMTA1-211ENST00000482934 ABCA10Q8WWZ4 1543 aa22.9■■□□□ 1.26
CAMTA1-211ENST00000482934 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
CAMTA1-211ENST00000482934 SNAPC4Q5SXM2 1469 aa22.82■■□□□ 1.24
CAMTA1-211ENST00000482934 GRIN2BQ13224 1484 aa22.8■■□□□ 1.24
CAMTA1-211ENST00000482934 GAPVD1Q14C86 1478 aa22.8■■□□□ 1.24
CAMTA1-211ENST00000482934 MAGI1Q96QZ7 1491 aaPredicted RBP22.78■■□□□ 1.24
CAMTA1-211ENST00000482934 RIMBP3CA6NJZ7 1639 aa22.7■■□□□ 1.22
CAMTA1-211ENST00000482934 RIMBP3BA6NNM3 1639 aa22.7■■□□□ 1.22
CAMTA1-211ENST00000482934 RIMBP3Q9UFD9 1639 aa22.7■■□□□ 1.22
CAMTA1-211ENST00000482934 SYNJ2O15056 1496 aa22.69■■□□□ 1.22
CAMTA1-211ENST00000482934 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
CAMTA1-211ENST00000482934 CLASP1Q7Z460 1538 aa22.66■■□□□ 1.22
CAMTA1-211ENST00000482934 ERICH3Q5RHP9 1530 aa22.63■■□□□ 1.21
CAMTA1-211ENST00000482934 FBLN2P98095 1184 aa22.63■■□□□ 1.21
CAMTA1-211ENST00000482934 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
CAMTA1-211ENST00000482934 CHMP7Q8WUX9 453 aaPredicted RBP22.56■■□□□ 1.2
CAMTA1-211ENST00000482934 GRIN2AQ12879 1464 aa22.55■■□□□ 1.2
CAMTA1-211ENST00000482934 CEP170Q5SW79 1584 aa22.51■■□□□ 1.19
CAMTA1-211ENST00000482934 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
CAMTA1-211ENST00000482934 NUP160Q12769 1436 aa22.46■■□□□ 1.19
CAMTA1-211ENST00000482934 CUL7Q14999 1698 aa22.46■■□□□ 1.19
CAMTA1-211ENST00000482934 KIF27Q86VH2 1401 aa22.44■■□□□ 1.18
CAMTA1-211ENST00000482934 ARAP1Q96P48 1450 aa22.43■■□□□ 1.18
CAMTA1-211ENST00000482934 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
CAMTA1-211ENST00000482934 SHROOM2Q13796 1616 aa22.42■■□□□ 1.18
CAMTA1-211ENST00000482934 IGF1RP08069 1367 aa22.38■■□□□ 1.17
CAMTA1-211ENST00000482934 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
CAMTA1-211ENST00000482934 ERCC6L2Q5T890 1561 aa22.35■■□□□ 1.17
CAMTA1-211ENST00000482934 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
CAMTA1-211ENST00000482934 CARMIL1Q5VZK9 1371 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms