RNA–Protein interactions for RNA: ENST00000482874.1

SLC22A23-208, Transcript of solute carrier family 22 member 23, humanhuman

TSL 3

Gene SLC22A23, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A23-208ENST00000482874 NISCHQ9Y2I1 1504 aa57.76■■■■■ 6.84
SLC22A23-208ENST00000482874 CCDC180Q9P1Z9 1646 aa51.4■■■■■ 5.82
SLC22A23-208ENST00000482874 ABCC9O60706 1549 aa50.17■■■■■ 5.62
SLC22A23-208ENST00000482874 RB1CC1Q8TDY2 1594 aa48.32■■■■■ 5.33
SLC22A23-208ENST00000482874 NACADO15069 1562 aa48.3■■■■■ 5.32
SLC22A23-208ENST00000482874 ZCCHC6Q5VYS8 1495 aaKnown RBP48.13■■■■■ 5.3
SLC22A23-208ENST00000482874 MYO15BQ96JP2 1530 aa48.08■■■■■ 5.29
SLC22A23-208ENST00000482874 DCAF8L2P0C7V8 631 aa47.97■■■■■ 5.27
SLC22A23-208ENST00000482874 DCAF1Q9Y4B6 1507 aa47.86■■■■■ 5.25
SLC22A23-208ENST00000482874 UNC13AQ9UPW8 1703 aa47.29■■■■■ 5.16
SLC22A23-208ENST00000482874 BICRAQ9NZM4 1560 aa46.94■■■■■ 5.11
SLC22A23-208ENST00000482874 PABPN1Q86U42 306 aaKnown RBP eCLIP46.82■■■■■ 5.09
SLC22A23-208ENST00000482874 SCRIBQ14160 1630 aa46.79■■■■■ 5.08
SLC22A23-208ENST00000482874 SHROOM4Q9ULL8 1493 aa46.46■■■■■ 5.03
SLC22A23-208ENST00000482874 DNAJC5BQ9UF47 199 aa46.11■■■■■ 4.97
SLC22A23-208ENST00000482874 EIF4G1Q04637 1599 aaKnown RBP45.65■■■■■ 4.9
SLC22A23-208ENST00000482874 CC2D2AQ9P2K1 1620 aa45.44■■■■■ 4.87
SLC22A23-208ENST00000482874 CECR2Q9BXF3 1484 aa45.1■■■■■ 4.81
SLC22A23-208ENST00000482874 SMARCA4P51532 1647 aa44.82■■■■■ 4.77
SLC22A23-208ENST00000482874 BAZ1AQ9NRL2 1556 aaPredicted RBP44.75■■■■■ 4.75
SLC22A23-208ENST00000482874 NCAPD3P42695 1498 aa44.58■■■■■ 4.73
SLC22A23-208ENST00000482874 ATAD2BQ9ULI0 1458 aa44.57■■■■■ 4.73
SLC22A23-208ENST00000482874 SMARCA2P51531 1590 aa44.51■■■■■ 4.72
SLC22A23-208ENST00000482874 MROH2BQ7Z745 1585 aa44.5■■■■■ 4.71
SLC22A23-208ENST00000482874 PEG3Q9GZU2 1588 aa44.46■■■■■ 4.71
SLC22A23-208ENST00000482874 HMGXB3Q12766 1538 aa44.37■■■■■ 4.69
SLC22A23-208ENST00000482874 BAZ1BQ9UIG0 1483 aaKnown RBP44.15■■■■■ 4.66
SLC22A23-208ENST00000482874 WIZO95785 1651 aa44■■■■■ 4.63
SLC22A23-208ENST00000482874 RSF1Q96T23 1441 aaPredicted RBP43.98■■■■■ 4.63
SLC22A23-208ENST00000482874 TOP2AP11388 1531 aaKnown RBP43.55■■■■■ 4.56
SLC22A23-208ENST00000482874 NESP48681 1621 aa43.45■■■■■ 4.55
SLC22A23-208ENST00000482874 LAMC3Q9Y6N6 1575 aa43.4■■■■■ 4.54
SLC22A23-208ENST00000482874 CADPSQ9ULU8 1353 aa43.22■■■■■ 4.51
SLC22A23-208ENST00000482874 ERCC6Q03468 1493 aa43.2■■■■■ 4.51
SLC22A23-208ENST00000482874 PDS5BQ9NTI5 1447 aa43.03■■■■■ 4.48
SLC22A23-208ENST00000482874 CCDC88BA6NC98 1476 aa43.01■■■■■ 4.48
SLC22A23-208ENST00000482874 CFTRP13569 1480 aa43.01■■■■■ 4.48
SLC22A23-208ENST00000482874 KIF21AQ7Z4S6 1674 aa42.97■■■■■ 4.47
SLC22A23-208ENST00000482874 THOC2Q8NI27 1593 aaKnown RBP42.88■■■■■ 4.45
SLC22A23-208ENST00000482874 CUX2O14529 1486 aa42.87■■■■■ 4.45
SLC22A23-208ENST00000482874 FANCD2Q9BXW9 1451 aa42.72■■■■■ 4.43
SLC22A23-208ENST00000482874 PRDM2Q13029 1718 aa42.7■■■■■ 4.43
SLC22A23-208ENST00000482874 CEP164Q9UPV0 1460 aa42.66■■■■■ 4.42
SLC22A23-208ENST00000482874 SUPT5HO00267 1087 aaKnown RBP42.64■■■■■ 4.42
SLC22A23-208ENST00000482874 MRC2Q9UBG0 1479 aa42.62■■■■■ 4.41
SLC22A23-208ENST00000482874 WDR62O43379 1518 aa42.53■■■■■ 4.4
SLC22A23-208ENST00000482874 URB2Q14146 1524 aaKnown RBP42.34■■■■■ 4.37
SLC22A23-208ENST00000482874 TOPBP1Q92547 1522 aa42.05■■■■■ 4.32
SLC22A23-208ENST00000482874 ABCC8Q09428 1581 aa42.05■■■■■ 4.32
SLC22A23-208ENST00000482874 DNMBPQ6XZF7 1577 aa42.01■■■■■ 4.32
SLC22A23-208ENST00000482874 IFT140Q96RY7 1462 aa41.78■■■■■ 4.28
SLC22A23-208ENST00000482874 CUX1P39880 1505 aa41.75■■■■■ 4.27
SLC22A23-208ENST00000482874 POLA1P09884 1462 aaPredicted RBP41.7■■■■■ 4.27
SLC22A23-208ENST00000482874 TARBP1Q13395 1621 aaKnown RBP41.66■■■■■ 4.26
SLC22A23-208ENST00000482874 ZNF608Q9ULD9 1512 aaPredicted RBP41.59■■■■■ 4.25
SLC22A23-208ENST00000482874 FGD5Q6ZNL6 1462 aa41.58■■■■■ 4.25
SLC22A23-208ENST00000482874 DNAJC5Q9H3Z4 198 aa41.53■■■■■ 4.24
SLC22A23-208ENST00000482874 RAD54L2Q9Y4B4 1467 aa41.47■■■■■ 4.23
SLC22A23-208ENST00000482874 SOGA1O94964 1423 aa41.47■■■■■ 4.23
SLC22A23-208ENST00000482874 EIF4G3O43432 1585 aaKnown RBP41.46■■■■■ 4.23
SLC22A23-208ENST00000482874 WRNQ14191 1432 aaPredicted RBP eCLIP41.42■■■■■ 4.22
SLC22A23-208ENST00000482874 BIVM-ERCC5R4GMW8 1640 aa41.41■■■■■ 4.22
SLC22A23-208ENST00000482874 TOP2BQ02880 1626 aa41.4■■■■■ 4.22
SLC22A23-208ENST00000482874 SYNJ1O43426 1573 aa41.37■■■■■ 4.21
SLC22A23-208ENST00000482874 WDR97A6NE52 1622 aa41.34■■■■■ 4.21
SLC22A23-208ENST00000482874 AQRO60306 1485 aaKnown RBP eCLIP41.32■■■■■ 4.23e-6■■■■□ 24.7
SLC22A23-208ENST00000482874 TDRD9Q8NDG6 1382 aaKnown RBP41.23■■■■■ 4.19
SLC22A23-208ENST00000482874 ABCA10Q8WWZ4 1543 aa41.21■■■■■ 4.19
SLC22A23-208ENST00000482874 ABCA5Q8WWZ7 1642 aa41.07■■■■■ 4.17
SLC22A23-208ENST00000482874 GRIN2BQ13224 1484 aa41.02■■■■■ 4.16
SLC22A23-208ENST00000482874 GAPVD1Q14C86 1478 aa41.02■■■■■ 4.16
SLC22A23-208ENST00000482874 OSCARQ8IYS5 282 aa40.98■■■■■ 4.15
SLC22A23-208ENST00000482874 PBRM1Q86U86 1689 aa40.98■■■■■ 4.15
SLC22A23-208ENST00000482874 SNAPC4Q5SXM2 1469 aa40.96■■■■■ 4.15
SLC22A23-208ENST00000482874 MAGI1Q96QZ7 1491 aaPredicted RBP40.94■■■■■ 4.14
SLC22A23-208ENST00000482874 CHD1O14646 1710 aa40.93■■■■■ 4.14
SLC22A23-208ENST00000482874 SYNJ2O15056 1496 aa40.77■■■■■ 4.12
SLC22A23-208ENST00000482874 ERICH3Q5RHP9 1530 aa40.72■■■■■ 4.11
SLC22A23-208ENST00000482874 FBLN2P98095 1184 aa40.68■■■■■ 4.1
SLC22A23-208ENST00000482874 ADAMTS12P58397 1594 aa40.66■■■■■ 4.1
SLC22A23-208ENST00000482874 CHMP7Q8WUX9 453 aaPredicted RBP40.64■■■■■ 4.1
SLC22A23-208ENST00000482874 FHAD1B1AJZ9 1412 aa40.55■■■■■ 4.08
SLC22A23-208ENST00000482874 CLASP1Q7Z460 1538 aa40.54■■■■■ 4.08
SLC22A23-208ENST00000482874 KIF27Q86VH2 1401 aa40.54■■■■■ 4.08
SLC22A23-208ENST00000482874 GRIN2AQ12879 1464 aa40.51■■■■■ 4.08
SLC22A23-208ENST00000482874 RIMBP3CA6NJZ7 1639 aa40.42■■■■■ 4.06
SLC22A23-208ENST00000482874 RIMBP3BA6NNM3 1639 aa40.42■■■■■ 4.06
SLC22A23-208ENST00000482874 RIMBP3Q9UFD9 1639 aa40.42■■■■■ 4.06
SLC22A23-208ENST00000482874 IGF1RP08069 1367 aa40.42■■■■■ 4.06
SLC22A23-208ENST00000482874 ARHGEF11O15085 1522 aa40.41■■■■■ 4.06
SLC22A23-208ENST00000482874 NUP160Q12769 1436 aa40.37■■■■■ 4.05
SLC22A23-208ENST00000482874 CEP170Q5SW79 1584 aa40.34■■■■■ 4.05
SLC22A23-208ENST00000482874 CUL7Q14999 1698 aa40.34■■■■■ 4.05
SLC22A23-208ENST00000482874 TRIM41Q8WV44 630 aa40.3■■■■■ 4.04
SLC22A23-208ENST00000482874 RUSC2Q8N2Y8 1516 aa40.2■■■■■ 4.03
SLC22A23-208ENST00000482874 CARMIL1Q5VZK9 1371 aa40.13■■■■■ 4.02
SLC22A23-208ENST00000482874 SHROOM2Q13796 1616 aa40.1■■■■■ 4.01
SLC22A23-208ENST00000482874 ARAP1Q96P48 1450 aa40.1■■■■■ 4.01
SLC22A23-208ENST00000482874 KIAA0586Q9BVV6 1533 aa39.94■■■■□ 3.98
SLC22A23-208ENST00000482874 ERCC6L2Q5T890 1561 aa39.93■■■■□ 3.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms