RNA–Protein interactions for RNA: ENST00000482684.5

CUTA-208, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 1 (best)

Gene CUTA, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-208ENST00000482684 NISCHQ9Y2I1 1504 aa48.5■■■■■ 5.35
CUTA-208ENST00000482684 CCDC180Q9P1Z9 1646 aa42.89■■■■■ 4.46
CUTA-208ENST00000482684 ABCC9O60706 1549 aa41.49■■■■■ 4.23
CUTA-208ENST00000482684 DCAF8L2P0C7V8 631 aa40.49■■■■■ 4.07
CUTA-208ENST00000482684 ZCCHC6Q5VYS8 1495 aaKnown RBP40.48■■■■■ 4.07
CUTA-208ENST00000482684 NACADO15069 1562 aa40.22■■■■■ 4.03
CUTA-208ENST00000482684 RB1CC1Q8TDY2 1594 aa40.16■■■■■ 4.02
CUTA-208ENST00000482684 DCAF1Q9Y4B6 1507 aa40.14■■■■■ 4.02
CUTA-208ENST00000482684 MYO15BQ96JP2 1530 aa40.11■■■■■ 4.01
CUTA-208ENST00000482684 SCRIBQ14160 1630 aa39.19■■■■□ 3.86
CUTA-208ENST00000482684 UNC13AQ9UPW8 1703 aa39.18■■■■□ 3.86
CUTA-208ENST00000482684 PABPN1Q86U42 306 aaKnown RBP eCLIP38.88■■■■□ 3.81
CUTA-208ENST00000482684 BICRAQ9NZM4 1560 aa38.82■■■■□ 3.81
CUTA-208ENST00000482684 SHROOM4Q9ULL8 1493 aa38.71■■■■□ 3.79
CUTA-208ENST00000482684 EIF4G1Q04637 1599 aaKnown RBP37.8■■■■□ 3.64
CUTA-208ENST00000482684 CECR2Q9BXF3 1484 aa37.71■■■■□ 3.63
CUTA-208ENST00000482684 BAZ1AQ9NRL2 1556 aaPredicted RBP37.59■■■■□ 3.61
CUTA-208ENST00000482684 DNAJC5BQ9UF47 199 aa37.54■■■■□ 3.6
CUTA-208ENST00000482684 CC2D2AQ9P2K1 1620 aa37.54■■■■□ 3.6
CUTA-208ENST00000482684 SMARCA4P51532 1647 aa37.52■■■■□ 3.6
CUTA-208ENST00000482684 MROH2BQ7Z745 1585 aa37.38■■■■□ 3.57
CUTA-208ENST00000482684 SMARCA2P51531 1590 aa37.21■■■■□ 3.55
CUTA-208ENST00000482684 ATAD2BQ9ULI0 1458 aa37.18■■■■□ 3.54
CUTA-208ENST00000482684 RSF1Q96T23 1441 aaPredicted RBP37.15■■■■□ 3.54
CUTA-208ENST00000482684 PEG3Q9GZU2 1588 aa37.11■■■■□ 3.53
CUTA-208ENST00000482684 NCAPD3P42695 1498 aa37.08■■■■□ 3.53
CUTA-208ENST00000482684 WIZO95785 1651 aa37.02■■■■□ 3.52
CUTA-208ENST00000482684 BAZ1BQ9UIG0 1483 aaKnown RBP36.95■■■■□ 3.51
CUTA-208ENST00000482684 HMGXB3Q12766 1538 aa36.95■■■■□ 3.5
CUTA-208ENST00000482684 SUPT5HO00267 1087 aaKnown RBP36.75■■■■□ 3.47
CUTA-208ENST00000482684 TOP2AP11388 1531 aaKnown RBP36.66■■■■□ 3.46
CUTA-208ENST00000482684 CCDC88BA6NC98 1476 aa36.24■■■■□ 3.39
CUTA-208ENST00000482684 CADPSQ9ULU8 1353 aa36.06■■■■□ 3.36
CUTA-208ENST00000482684 LAMC3Q9Y6N6 1575 aa36.05■■■■□ 3.36
CUTA-208ENST00000482684 NESP48681 1621 aa36.01■■■■□ 3.36
CUTA-208ENST00000482684 CFTRP13569 1480 aa35.92■■■■□ 3.34
CUTA-208ENST00000482684 PDS5BQ9NTI5 1447 aa35.83■■■■□ 3.33
CUTA-208ENST00000482684 ERCC6Q03468 1493 aa35.78■■■■□ 3.32
CUTA-208ENST00000482684 PRDM2Q13029 1718 aa35.72■■■■□ 3.31
CUTA-208ENST00000482684 FANCD2Q9BXW9 1451 aa35.64■■■■□ 3.3
CUTA-208ENST00000482684 KIF21AQ7Z4S6 1674 aa35.62■■■■□ 3.29
CUTA-208ENST00000482684 CEP164Q9UPV0 1460 aa35.57■■■■□ 3.28
CUTA-208ENST00000482684 MRC2Q9UBG0 1479 aa35.39■■■■□ 3.26
CUTA-208ENST00000482684 THOC2Q8NI27 1593 aaKnown RBP35.34■■■■□ 3.25
CUTA-208ENST00000482684 WDR62O43379 1518 aa35.22■■■■□ 3.23
CUTA-208ENST00000482684 URB2Q14146 1524 aaKnown RBP35.22■■■■□ 3.23
CUTA-208ENST00000482684 ABCC8Q09428 1581 aa35.21■■■■□ 3.23
CUTA-208ENST00000482684 CUX2O14529 1486 aa35.15■■■■□ 3.22
CUTA-208ENST00000482684 DNMBPQ6XZF7 1577 aa35.13■■■■□ 3.21
CUTA-208ENST00000482684 TOPBP1Q92547 1522 aa35.12■■■■□ 3.21
CUTA-208ENST00000482684 WRNQ14191 1432 aaPredicted RBP eCLIP35.06■■■■□ 3.26e-6■■■□□ 16.7
CUTA-208ENST00000482684 CUX1P39880 1505 aa35.03■■■■□ 3.2
CUTA-208ENST00000482684 TOP2BQ02880 1626 aa34.89■■■■□ 3.18
CUTA-208ENST00000482684 BIVM-ERCC5R4GMW8 1640 aa34.88■■■■□ 3.17
CUTA-208ENST00000482684 SYNJ1O43426 1573 aa34.88■■■■□ 3.17
CUTA-208ENST00000482684 FGD5Q6ZNL6 1462 aa34.86■■■■□ 3.17
CUTA-208ENST00000482684 POLA1P09884 1462 aaPredicted RBP34.84■■■■□ 3.17
CUTA-208ENST00000482684 IFT140Q96RY7 1462 aa34.79■■■■□ 3.16
CUTA-208ENST00000482684 SOGA1O94964 1423 aa34.78■■■■□ 3.16
CUTA-208ENST00000482684 RAD54L2Q9Y4B4 1467 aa34.71■■■■□ 3.15
CUTA-208ENST00000482684 TRIM41Q8WV44 630 aa34.7■■■■□ 3.15
CUTA-208ENST00000482684 TARBP1Q13395 1621 aaKnown RBP34.66■■■■□ 3.14
CUTA-208ENST00000482684 CHIC1Q5VXU3 224 aa34.55■■■■□ 3.12
CUTA-208ENST00000482684 ABCA10Q8WWZ4 1543 aa34.54■■■■□ 3.12
CUTA-208ENST00000482684 ZNF608Q9ULD9 1512 aaPredicted RBP34.54■■■■□ 3.12
CUTA-208ENST00000482684 WDR97A6NE52 1622 aa34.5■■■■□ 3.11
CUTA-208ENST00000482684 TDRD9Q8NDG6 1382 aaKnown RBP34.49■■■■□ 3.11
CUTA-208ENST00000482684 AQRO60306 1485 aaKnown RBP eCLIP34.46■■■■□ 3.113e-9■■■■■ 30.8
CUTA-208ENST00000482684 EIF4G3O43432 1585 aaKnown RBP34.45■■■■□ 3.1
CUTA-208ENST00000482684 GAPVD1Q14C86 1478 aa34.37■■■■□ 3.09
CUTA-208ENST00000482684 ABCA5Q8WWZ7 1642 aa34.33■■■■□ 3.09
CUTA-208ENST00000482684 KIF27Q86VH2 1401 aa34.31■■■■□ 3.08
CUTA-208ENST00000482684 GRIN2BQ13224 1484 aa34.29■■■■□ 3.08
CUTA-208ENST00000482684 PBRM1Q86U86 1689 aa34.24■■■■□ 3.07
CUTA-208ENST00000482684 ERICH3Q5RHP9 1530 aa34.15■■■■□ 3.06
CUTA-208ENST00000482684 SNAPC4Q5SXM2 1469 aa34.14■■■■□ 3.06
CUTA-208ENST00000482684 MAGI1Q96QZ7 1491 aaPredicted RBP34.14■■■■□ 3.06
CUTA-208ENST00000482684 RUSC2Q8N2Y8 1516 aa34.09■■■■□ 3.05
CUTA-208ENST00000482684 FBLN2P98095 1184 aa34.06■■■■□ 3.04
CUTA-208ENST00000482684 IGF1RP08069 1367 aa34.06■■■■□ 3.04
CUTA-208ENST00000482684 CHMP7Q8WUX9 453 aaPredicted RBP34.03■■■■□ 3.04
CUTA-208ENST00000482684 EEA1Q15075 1411 aa34.02■■■■□ 3.04
CUTA-208ENST00000482684 FHAD1B1AJZ9 1412 aa33.99■■■■□ 3.03
CUTA-208ENST00000482684 SYNJ2O15056 1496 aa33.99■■■■□ 3.03
CUTA-208ENST00000482684 ADAMTS12P58397 1594 aa33.97■■■■□ 3.03
CUTA-208ENST00000482684 CUL7Q14999 1698 aa33.96■■■■□ 3.03
CUTA-208ENST00000482684 FAM9AQ8IZU1 332 aaPredicted RBP33.95■■■■□ 3.03
CUTA-208ENST00000482684 CHD1O14646 1710 aa33.93■■■■□ 3.02
CUTA-208ENST00000482684 CSRNP3Q8WYN3 585 aa33.92■■■■□ 3.02
CUTA-208ENST00000482684 CARMIL1Q5VZK9 1371 aa33.92■■■■□ 3.02
CUTA-208ENST00000482684 OSCARQ8IYS5 282 aa33.87■■■■□ 3.01
CUTA-208ENST00000482684 GRIN2AQ12879 1464 aa33.82■■■■□ 3.01
CUTA-208ENST00000482684 RAPGEF2Q9Y4G8 1499 aa33.76■■■■□ 3
CUTA-208ENST00000482684 PRXQ9BXM0 1461 aa33.71■■■□□ 2.99
CUTA-208ENST00000482684 NUP160Q12769 1436 aa33.62■■■□□ 2.97
CUTA-208ENST00000482684 CEP170Q5SW79 1584 aa33.6■■■□□ 2.97
CUTA-208ENST00000482684 KIF21BO75037 1637 aa33.57■■■□□ 2.97
CUTA-208ENST00000482684 CLASP1Q7Z460 1538 aa33.53■■■□□ 2.96
CUTA-208ENST00000482684 EHMT2Q96KQ7 1210 aa33.49■■■□□ 2.95
CUTA-208ENST00000482684 KIAA0586Q9BVV6 1533 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms