RNA–Protein interactions for RNA: ENST00000482510.5

PSMD6-209, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 5 BASIC

Gene PSMD6, Length 1,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-209ENST00000482510 NISCHQ9Y2I1 1504 aa30.4■■■□□ 2.46
PSMD6-209ENST00000482510 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
PSMD6-209ENST00000482510 ABCC9O60706 1549 aa26.05■■□□□ 1.76
PSMD6-209ENST00000482510 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
PSMD6-209ENST00000482510 ZCCHC6Q5VYS8 1495 aaKnown RBP25.37■■□□□ 1.65
PSMD6-209ENST00000482510 NACADO15069 1562 aa25.23■■□□□ 1.63
PSMD6-209ENST00000482510 RB1CC1Q8TDY2 1594 aa25.2■■□□□ 1.62
PSMD6-209ENST00000482510 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
PSMD6-209ENST00000482510 MYO15BQ96JP2 1530 aa25.16■■□□□ 1.62
PSMD6-209ENST00000482510 SCRIBQ14160 1630 aa24.57■■□□□ 1.52
PSMD6-209ENST00000482510 UNC13AQ9UPW8 1703 aa24.52■■□□□ 1.52
PSMD6-209ENST00000482510 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.5
PSMD6-209ENST00000482510 BICRAQ9NZM4 1560 aa24.34■■□□□ 1.49
PSMD6-209ENST00000482510 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
PSMD6-209ENST00000482510 EIF4G1Q04637 1599 aaKnown RBP23.73■■□□□ 1.39
PSMD6-209ENST00000482510 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
PSMD6-209ENST00000482510 DNAJC5BQ9UF47 199 aa23.6■■□□□ 1.37
PSMD6-209ENST00000482510 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
PSMD6-209ENST00000482510 CC2D2AQ9P2K1 1620 aa23.55■■□□□ 1.36
PSMD6-209ENST00000482510 SMARCA4P51532 1647 aa23.51■■□□□ 1.35
PSMD6-209ENST00000482510 MROH2BQ7Z745 1585 aa23.42■■□□□ 1.34
PSMD6-209ENST00000482510 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
PSMD6-209ENST00000482510 ATAD2BQ9ULI0 1458 aa23.33■■□□□ 1.33
PSMD6-209ENST00000482510 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
PSMD6-209ENST00000482510 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
PSMD6-209ENST00000482510 PEG3Q9GZU2 1588 aa23.27■■□□□ 1.32
PSMD6-209ENST00000482510 BAZ1BQ9UIG0 1483 aaKnown RBP23.19■■□□□ 1.3
PSMD6-209ENST00000482510 WIZO95785 1651 aa23.18■■□□□ 1.3
PSMD6-209ENST00000482510 HMGXB3Q12766 1538 aa23.17■■□□□ 1.3
PSMD6-209ENST00000482510 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
PSMD6-209ENST00000482510 TOP2AP11388 1531 aaKnown RBP22.98■■□□□ 1.27
PSMD6-209ENST00000482510 CCDC88BA6NC98 1476 aa22.72■■□□□ 1.23
PSMD6-209ENST00000482510 CADPSQ9ULU8 1353 aa22.64■■□□□ 1.22
PSMD6-209ENST00000482510 LAMC3Q9Y6N6 1575 aa22.62■■□□□ 1.21
PSMD6-209ENST00000482510 NESP48681 1621 aa22.6■■□□□ 1.21
PSMD6-209ENST00000482510 CFTRP13569 1480 aa22.54■■□□□ 1.2
PSMD6-209ENST00000482510 PDS5BQ9NTI5 1447 aa22.51■■□□□ 1.19
PSMD6-209ENST00000482510 ERCC6Q03468 1493 aa22.48■■□□□ 1.19
PSMD6-209ENST00000482510 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
PSMD6-209ENST00000482510 PRDM2Q13029 1718 aa22.35■■□□□ 1.17
PSMD6-209ENST00000482510 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.16
PSMD6-209ENST00000482510 KIF21AQ7Z4S6 1674 aa22.32■■□□□ 1.16
PSMD6-209ENST00000482510 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
PSMD6-209ENST00000482510 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
PSMD6-209ENST00000482510 ABCC8Q09428 1581 aa22.11■■□□□ 1.13
PSMD6-209ENST00000482510 WDR62O43379 1518 aa22.1■■□□□ 1.13
PSMD6-209ENST00000482510 CUX2O14529 1486 aa22.09■■□□□ 1.13
PSMD6-209ENST00000482510 URB2Q14146 1524 aaKnown RBP22.09■■□□□ 1.13
PSMD6-209ENST00000482510 TOPBP1Q92547 1522 aa22.03■■□□□ 1.12
PSMD6-209ENST00000482510 DNMBPQ6XZF7 1577 aa22.03■■□□□ 1.12
PSMD6-209ENST00000482510 WRNQ14191 1432 aaPredicted RBP eCLIP21.98■■□□□ 1.11
PSMD6-209ENST00000482510 CUX1P39880 1505 aa21.96■■□□□ 1.11
PSMD6-209ENST00000482510 FGD5Q6ZNL6 1462 aa21.86■■□□□ 1.09
PSMD6-209ENST00000482510 TOP2BQ02880 1626 aa21.86■■□□□ 1.09
PSMD6-209ENST00000482510 POLA1P09884 1462 aaPredicted RBP21.85■■□□□ 1.09
PSMD6-209ENST00000482510 IFT140Q96RY7 1462 aa21.85■■□□□ 1.09
PSMD6-209ENST00000482510 SYNJ1O43426 1573 aa21.85■■□□□ 1.09
PSMD6-209ENST00000482510 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
PSMD6-209ENST00000482510 SOGA1O94964 1423 aa21.83■■□□□ 1.09
PSMD6-209ENST00000482510 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.07
PSMD6-209ENST00000482510 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
PSMD6-209ENST00000482510 TARBP1Q13395 1621 aaKnown RBP21.73■■□□□ 1.07
PSMD6-209ENST00000482510 ZNF608Q9ULD9 1512 aaPredicted RBP21.68■■□□□ 1.06
PSMD6-209ENST00000482510 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
PSMD6-209ENST00000482510 TDRD9Q8NDG6 1382 aaKnown RBP21.65■■□□□ 1.06
PSMD6-209ENST00000482510 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.056e-6■■■■□ 23.2
PSMD6-209ENST00000482510 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
PSMD6-209ENST00000482510 WDR97A6NE52 1622 aa21.62■■□□□ 1.05
PSMD6-209ENST00000482510 EIF4G3O43432 1585 aaKnown RBP21.6■■□□□ 1.05
PSMD6-209ENST00000482510 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
PSMD6-209ENST00000482510 KIF27Q86VH2 1401 aa21.53■■□□□ 1.04
PSMD6-209ENST00000482510 GRIN2BQ13224 1484 aa21.52■■□□□ 1.04
PSMD6-209ENST00000482510 ABCA5Q8WWZ7 1642 aa21.51■■□□□ 1.03
PSMD6-209ENST00000482510 PBRM1Q86U86 1689 aa21.44■■□□□ 1.02
PSMD6-209ENST00000482510 SNAPC4Q5SXM2 1469 aa21.43■■□□□ 1.02
PSMD6-209ENST00000482510 MAGI1Q96QZ7 1491 aaPredicted RBP21.42■■□□□ 1.02
PSMD6-209ENST00000482510 ERICH3Q5RHP9 1530 aa21.41■■□□□ 1.02
PSMD6-209ENST00000482510 FBLN2P98095 1184 aa21.4■■□□□ 1.02
PSMD6-209ENST00000482510 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
PSMD6-209ENST00000482510 CHMP7Q8WUX9 453 aaPredicted RBP21.38■■□□□ 1.01
PSMD6-209ENST00000482510 IGF1RP08069 1367 aa21.36■■□□□ 1.01
PSMD6-209ENST00000482510 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
PSMD6-209ENST00000482510 SYNJ2O15056 1496 aa21.33■■□□□ 1.01
PSMD6-209ENST00000482510 FHAD1B1AJZ9 1412 aa21.33■■□□□ 1.01
PSMD6-209ENST00000482510 EEA1Q15075 1411 aa21.32■■□□□ 1
PSMD6-209ENST00000482510 OSCARQ8IYS5 282 aa21.31■■□□□ 1
PSMD6-209ENST00000482510 ADAMTS12P58397 1594 aa21.3■■□□□ 1
PSMD6-209ENST00000482510 CARMIL1Q5VZK9 1371 aa21.28■■□□□ 1
PSMD6-209ENST00000482510 FAM9AQ8IZU1 332 aaPredicted RBP21.28■■□□□ 1
PSMD6-209ENST00000482510 CUL7Q14999 1698 aa21.28■■□□□ 1
PSMD6-209ENST00000482510 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
PSMD6-209ENST00000482510 CHD1O14646 1710 aa21.26■□□□□ 0.99
PSMD6-209ENST00000482510 GRIN2AQ12879 1464 aa21.22■□□□□ 0.99
PSMD6-209ENST00000482510 RAPGEF2Q9Y4G8 1499 aa21.17■□□□□ 0.98
PSMD6-209ENST00000482510 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
PSMD6-209ENST00000482510 NUP160Q12769 1436 aa21.1■□□□□ 0.97
PSMD6-209ENST00000482510 DNAJC5Q9H3Z4 198 aa21.09■□□□□ 0.97
PSMD6-209ENST00000482510 CEP170Q5SW79 1584 aa21.06■□□□□ 0.96
PSMD6-209ENST00000482510 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
PSMD6-209ENST00000482510 KIF21BO75037 1637 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms